Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0163700 Rhododendron simsii HOM05D008523 ORTHO05D010723 1.2e-172 609.8 301 100.0
Dinv40375 Davidia involucrata HOM05D008523 ORTHO05D010723 5.9e-100 368.2 292 66.8
GSVIVG01008905001 Vitis vinifera HOM05D008523 ORTHO05D010723 2.0e-87 326.6 287 59.9
TAR381G0860 Trochodendron aralioides HOM05D008523 ORTHO05D010723 5.7e-87 325.1 292 58.9
Atru.chr13.1404 Acer truncatum HOM05D008523 ORTHO05D010723 1.3e-83 313.9 301 57.1
MD08G1168300 Malus domestica HOM05D008523 ORTHO05D010723 1.9e-82 310.1 285 57.9
PSO170G6317 Papaver somniferum HOM05D008523 ORTHO05D010723 8.3e-78 294.7 299 52.8
PGR042G3956 Punica granatum HOM05D008523 ORTHO05D010723 1.4e-77 293.9 287 55.4
Nn1g08698 Nelumbo nucifera HOM05D008523 ORTHO05D010723 4.1e-77 292.4 291 52.9
CANSAT25G1340 Cannabis sativa HOM05D008523 ORTHO05D010723 2.0e-76 290.0 286 54.9
Aqoxy6G00203 Aquilegia oxysepala HOM05D008523 ORTHO05D010723 2.3e-75 286.6 287 55.1
Migut.C01156 Erythranthe guttata HOM05D008523 ORTHO05D010723 8.0e-73 278.1 290 51.0
Dinv01183 Davidia involucrata HOM05D008523 ORTHO05D010723 5.9e-68 261.9 227 63.0
Thecc.08G120800 Theobroma cacao HOM05D008523 ORTHO05D010723 2.2e-62 243.4 154 77.3
QL05p051451 Quercus lobata HOM05D000038 ORTHO05D000423 2.3e-59 233.4 226 58.0
Solyc11g013090.2 Solanum lycopersicum HOM05D008523 ORTHO05D010723 4.3e-58 229.2 458 35.4
AagrBONN_evm.TU.Sc2ySwM_362.1100 Anthoceros agrestis HOM05D008523 ORTHO05D010723 9.5e-58 228.0 181 63.5
Nitab4.5_0010364g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 4.7e-57 225.7 226 54.4
Pp3c11_25910 Physcomitrium patens HOM05D008523 ORTHO05D010723 4.7e-57 225.7 185 61.6
SEGI_03454 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 4.7e-57 225.7 157 71.3
Cfa015985 Carpinus fangiana HOM05D008523 ORTHO05D000423 8.0e-57 224.9 226 56.6
Ciclev10003859m.g Citrus clementina HOM05D008523 ORTHO05D010723 1.1e-56 224.6 239 54.8
SMO347G0131 Selaginella moellendorffii HOM05D008523 ORTHO05D010723 1.1e-56 224.6 175 64.6
QL05p051411 Quercus lobata HOM05D000038 ORTHO05D000423 5.2e-56 222.2 244 53.7
Mapoly0082s0057 Marchantia polymorpha HOM05D008523 ORTHO05D010723 6.8e-56 221.9 190 58.9
Nitab4.5_0004554g0040 Nicotiana tabacum HOM05D000038 ORTHO05D000423 1.2e-55 221.1 243 52.3
CBR_g66722 Chara braunii HOM05D008523 ORTHO05D010723 7.5e-55 218.4 194 57.2
HPP92_005840 Vanilla planifolia HOM05D008523 ORTHO05D010723 7.0e-53 211.8 204 53.4
HPP92_005846 Vanilla planifolia HOM05D008523 ORTHO05D010723 7.8e-52 208.4 185 57.3
Gorai.010G048500 Gossypium raimondii HOM05D000038 ORTHO05D000423 1.7e-51 207.2 236 52.1
HPP92_027951 Vanilla planifolia HOM05D008523 ORTHO05D010723 1.1e-50 204.5 182 57.1
Haze_00486 Corylus avellana HOM05D008523 ORTHO05D010723 1.1e-48 198.0 210 54.8
Cpa.g.sc36.25 Carica papaya HOM05D008523 ORTHO05D010723 2.6e-47 193.4 212 51.4
Peaxi162Scf00451g00722 Petunia axillaris HOM05D000038 ORTHO05D000423 3.4e-47 193.0 144 69.4
MBI03_g26564_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 2.1e-44 183.7 212 49.1
CSS0029332 Camellia sinensis var. sinensis HOM05D008523 ORTHO05D010723 3.9e-43 179.5 104 83.7
PRCOL_00001244 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 2.4e-40 170.2 155 55.5
Gohir.A06G042301 Gossypium hirsutum HOM05D008523 ORTHO05D010723 3.4e-39 166.4 209 47.8
SalBow7G0429 Salvia bowleyana HOM05D008523 ORTHO05D010723 4.4e-39 166.0 153 60.1
MCO15G259 Micromonas commoda HOM05D008523 ORTHO05D010723 9.2e-37 158.3 153 51.0
PGSC0003DMG402000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 1.1e-34 151.4 124 63.7
PRCOL_00000745 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 1.2e-33 147.9 174 46.6
MBI03_g05982_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 4.4e-31 139.4 164 46.3
SalBow7G3869 Salvia bowleyana HOM05D008523 ORTHO05D010723 4.2e-29 132.9 153 49.0
COL.COLO4_07273 Corchorus olitorius HOM05D000038 ORTHO05D000423 1.4e-21 107.8 62 77.4
Gohir.D06G043400 Gossypium hirsutum HOM05D000038 ORTHO05D000423 1.6e-20 104.4 61 80.3
Gohir.A06G042401 Gossypium hirsutum HOM05D000038 ORTHO05D000423 4.6e-20 102.8 64 75.0
Haze_00484 Corylus avellana HOM05D008523 ORTHO05D010723 1.1e-16 91.7 62 69.4
PGSC0003DMG401000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 2.4e-16 90.5 63 69.8
HPP92_009511 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.4e-16 90.5 128 43.8
Sopen11g007810 Solanum pennellii HOM05D000038 ORTHO05D000423 3.4e-15 86.7 62 69.4
COL.COLO4_00988 Corchorus olitorius HOM05D008523 ORTHO05D010723 7.6e-15 85.5 128 34.4
Duzib041G0488 Durio zibethinus HOM05D008523 ORTHO05D010723 3.8e-14 83.2 133 39.8
Ca_29195_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 1.1e-13 81.6 161 34.8
Ca_31317_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 2.3e-11 73.9 95 45.3
SEGI_37575 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 2.3e-11 73.9 46 73.9
Nitab4.5_0029384g0020 Nicotiana tabacum HOM05D008523 ORTHO05D010723 1.3e-09 68.2 133 39.1


User provided reference genes

Program Settings