Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0160100 Rhododendron simsii HOM05D001626 ORTHO05D001563 6.0e-103 377.5 187 100.0
Actinidia29324 Actinidia chinensis HOM05D001626 ORTHO05D001563 7.7e-58 227.6 152 77.6
CSS0026844 Camellia sinensis var. sinensis HOM05D001626 ORTHO05D001563 1.1e-48 197.2 157 64.3
Dinv41822 Davidia involucrata HOM05D001626 ORTHO05D001563 2.6e-45 186.0 162 61.1
Dinv12446 Davidia involucrata HOM05D001626 ORTHO05D001563 2.7e-42 176.0 144 64.6
TAR636G0010 Trochodendron aralioides HOM05D001626 ORTHO05D001563 2.3e-41 172.9 162 57.4
Hma1.2p1_0196F.1_g084880 Hydrangea macrophylla HOM05D001626 ORTHO05D001563 5.6e-40 168.3 145 62.8
Nn6g35548 Nelumbo nucifera HOM05D001626 ORTHO05D001563 2.6e-37 159.5 160 51.2
GSVIVG01035417001 Vitis vinifera HOM05D001626 ORTHO05D001563 1.8e-35 153.3 162 51.9
Lj8A523G41 Lonicera japonica HOM05D001626 ORTHO05D001563 2.7e-34 149.4 180 49.4
Migut.E01583 Erythranthe guttata HOM05D001626 ORTHO05D001563 6.6e-33 144.8 170 48.8
Manes.03G050600 Manihot esculenta HOM05D001626 ORTHO05D001563 4.7e-31 138.7 164 50.6
Aqoxy7G04005 Aquilegia oxysepala HOM05D001626 ORTHO05D001563 1.0e-30 137.5 166 49.4
CiPaw.16G026500 Carya illinoinensis HOM05D001626 ORTHO05D001563 1.2e-29 134.0 162 48.1
Ciclev10009319m.g Citrus clementina HOM05D001626 ORTHO05D001563 2.0e-29 133.3 162 48.8
MSTRG.1696 Avicennia marina HOM05D001626 ORTHO05D001563 6.4e-28 128.3 170 44.7
Oeu047093.1 Olea europaea HOM05D001626 ORTHO05D001563 6.4e-28 128.3 172 45.9
Potri.006G224900 Populus trichocarpa HOM05D001626 ORTHO05D001563 4.1e-27 125.6 195 42.1
SalBow1G4900 Salvia bowleyana HOM05D001626 ORTHO05D001563 1.6e-26 123.6 180 41.7
Eucgr.C00672 Eucalyptus grandis HOM05D001626 ORTHO05D001563 3.5e-26 122.5 163 47.9
PGR031G3406 Punica granatum HOM05D001626 ORTHO05D001563 4.6e-26 122.1 160 45.6
QL02p000629 Quercus lobata HOM05D001626 ORTHO05D001563 1.1e-24 117.5 161 47.8
Glyma.04G054000 Glycine max HOM05D001626 ORTHO05D001563 5.6e-24 115.2 151 45.0
ECA234G2108 Erigeron canadensis HOM05D001626 ORTHO05D001563 7.3e-24 114.8 163 44.8
DCAR_000808 Daucus carota HOM05D001626 ORTHO05D001563 8.1e-23 111.3 183 41.5
Prupe.1G408300 Prunus persica HOM05D001626 ORTHO05D001563 1.4e-22 110.5 168 46.4
Glyma.06G054300 Glycine max HOM05D001626 ORTHO05D001563 3.1e-22 109.4 152 44.1
Haze_18147 Corylus avellana HOM05D001626 ORTHO05D001563 6.8e-22 108.2 139 47.5
HanXRQChr12g0358771 Helianthus annuus HOM05D001626 ORTHO05D001563 4.4e-21 105.5 153 46.4
Sc23g0005780 Simmondsia chinensis HOM05D001626 ORTHO05D001563 4.4e-21 105.5 158 43.0
Sabra06G0173900 Salix brachista HOM05D001626 ORTHO05D001563 7.5e-21 104.8 206 37.4
AUR62000403 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.3e-20 104.0 115 52.2
AUR62006760 Chenopodium quinoa HOM05D001626 ORTHO05D001563 1.3e-20 104.0 99 56.6
Psat0s1916g0120 Pisum sativum HOM05D001626 ORTHO05D001563 1.3e-20 104.0 164 41.5
EL10Ac4g09479 Beta vulgaris HOM05D001626 ORTHO05D001563 2.2e-20 103.2 101 56.4
Cc08_g10970 Coffea canephora HOM05D001626 ORTHO05D001563 2.9e-20 102.8 161 44.7
FAN20G1752 Fragaria x ananassa HOM05D001626 ORTHO05D001563 3.7e-20 102.4 211 37.4
vmacro05166 Vaccinium macrocarpon HOM05D001626 ORTHO05D001563 6.4e-20 101.7 58 82.8
VMungo1309G3042 Vigna mungo HOM05D001626 ORTHO05D001563 1.4e-19 100.5 151 39.7
Hund03312 Selenicereus undatus HOM05D001626 ORTHO05D001563 2.4e-19 99.8 100 55.0
TWI32G0892 Tripterygium wilfordii HOM05D001626 ORTHO05D001563 5.4e-19 98.6 161 38.5
Lalb_Chr23g0267891 Lupinus albus HOM05D001626 ORTHO05D001563 7.1e-19 98.2 166 38.0
Phvul.009G079800 Phaseolus vulgaris HOM05D001626 ORTHO05D001563 1.2e-18 97.4 151 41.7
FvH4_2g31470 Fragaria vesca HOM05D001626 ORTHO05D001563 1.6e-18 97.1 211 35.5
FAN15G1412 Fragaria x ananassa HOM05D001626 ORTHO05D001563 2.7e-18 96.3 207 36.7
MD08G1066100 Malus domestica HOM05D001626 ORTHO05D001563 4.6e-18 95.5 168 43.5
Medtr3g104670 Medicago truncatula HOM05D001626 ORTHO05D001563 4.6e-18 95.5 164 39.6
RcHm_v2.0_Chr6g0311331 Rosa chinensis HOM05D001626 ORTHO05D001563 6.0e-18 95.1 207 35.3
TPR.G3535 Trifolium pratense HOM05D001626 ORTHO05D001563 6.0e-18 95.1 163 39.3
CDE04G3102 Ceratophyllum demersum HOM05D002641 ORTHO05D001537 1.3e-17 94.0 143 38.5
CDE02G4441 Ceratophyllum demersum HOM05D001626 ORTHO05D001563 1.7e-17 93.6 143 40.6
CsaV3_4G035830 Cucumis sativus L. HOM05D001626 ORTHO05D001563 2.3e-17 93.2 167 39.5
Ca_15818_v3 Cicer arietinum L. HOM05D001626 ORTHO05D001563 3.9e-17 92.4 162 37.7
Ca_15852_v3 Cicer arietinum L. HOM05D001626 ORTHO05D001563 3.9e-17 92.4 162 37.7
MELO3C016888.2 Cucumis melo HOM05D001626 ORTHO05D001563 3.9e-17 92.4 166 39.8
Lsat_1_v5_gn_7_60541 Lactuca sativa HOM05D001626 ORTHO05D001563 1.9e-16 90.1 150 42.7
HPP92_011471 Vanilla planifolia HOM05D001626 ORTHO05D001563 1.6e-15 87.0 151 41.1
COL.COLO4_21099 Corchorus olitorius HOM05D001626 ORTHO05D001563 2.8e-15 86.3 103 48.5
Lj1g0015299 Lotus japonicus HOM05D001626 ORTHO05D001563 3.6e-15 85.9 159 39.0
HPP92_011466 Vanilla planifolia HOM05D001626 ORTHO05D001563 4.7e-15 85.5 151 40.4
Cpa.g.sc7.148 Carica papaya HOM05D001626 ORTHO05D001563 6.2e-15 85.1 101 48.5
Os06g0148000 Oryza sativa ssp. japonica HOM05D001626 ORTHO05D001563 8.1e-15 84.7 150 40.7
Gohir.A08G247600 Gossypium hirsutum HOM05D001626 ORTHO05D001563 1.1e-14 84.3 102 51.0
MD15G1055100 Malus domestica HOM05D001626 ORTHO05D001563 2.3e-14 83.2 165 40.6
Gorai.004G286400 Gossypium raimondii HOM05D001626 ORTHO05D001563 6.8e-14 81.6 107 48.6
ClCG05G018060 Citrullus lanatus HOM05D001626 ORTHO05D001563 3.4e-13 79.3 148 38.5
arahy.Tifrunner.gnm1.ann1.BN91FR Arachis hypogaea HOM05D001626 ORTHO05D001563 5.8e-13 78.6 163 36.2
Sed0013839 Sechium edule HOM05D001626 ORTHO05D001563 9.9e-13 77.8 165 37.0
ATR0051G039 Amborella trichopoda HOM05D001626 ORTHO05D001563 2.2e-12 76.6 152 39.5
FAN24G0585 Fragaria x ananassa HOM05D001626 ORTHO05D001563 3.7e-12 75.9 103 48.5
Thecc.09G058200 Theobroma cacao HOM05D001626 ORTHO05D001563 1.2e-10 70.9 112 41.1
FAN27G1240 Fragaria x ananassa HOM05D001626 ORTHO05D001563 2.7e-10 69.7 99 48.5
arahy.Tifrunner.gnm1.ann1.DM9ZMN Arachis hypogaea HOM05D001626 ORTHO05D001563 1.9e-08 63.5 158 32.3
SGA_v2.0_scaffold20G09199 Striga asiatica HOM05D001626 ORTHO05D001563 3.6e-07 59.3 53 56.6
arahy.Tifrunner.gnm1.ann1.2XQ85E Arachis hypogaea HOM05D001626 ORTHO05D001563 8.9e-06 54.7 93 38.7
Solyc06g052080.4 Solanum lycopersicum HOM05D001626 ORTHO05D001563 8.9e-06 54.7 168 28.0
Sopen06g018140 Solanum pennellii HOM05D001626 ORTHO05D001563 8.9e-06 54.7 168 28.0


User provided reference genes

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