Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 1.9e-256 889.4 755 100.0
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 1.1e-176 624.4 753 75.0
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.3e-148 531.2 753 62.5
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.4e-102 376.3 749 53.0
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.7e-98 363.2 749 54.1
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 6.9e-97 359.4 750 54.8
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 1.2e-96 358.6 745 55.3
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.8e-96 356.3 749 52.7
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 2.9e-95 354.0 732 48.5
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 1.2e-88 332.0 743 48.6
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 7.6e-88 329.3 739 56.0
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.3e-87 328.6 753 57.5
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 9.3e-86 322.4 747 53.0
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 1.2e-85 322.0 751 54.1
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 3.3e-83 313.9 743 54.9
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 4.3e-83 313.5 754 50.3
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 5.6e-83 313.2 754 50.5
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 1.3e-82 312.0 755 55.0
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 1.8e-81 308.1 743 49.7
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 1.8e-81 308.1 490 58.0
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 2.4e-81 307.8 751 54.1
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 5.3e-81 306.6 743 48.2
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.3e-79 302.0 738 46.7
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 9.3e-78 295.8 751 50.5
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 1.2e-77 295.4 740 51.4
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 6.0e-77 293.1 745 53.2
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 3.9e-76 290.4 751 57.5
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 5.1e-76 290.0 746 47.5
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 3.3e-75 287.3 752 48.4
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 1.1e-73 282.3 750 51.9
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 2.2e-71 274.6 505 53.7
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 1.6e-69 268.5 484 48.1
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 2.7e-69 267.7 477 56.6
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 1.3e-68 265.4 751 52.6
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 2.3e-68 264.6 754 46.2
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 2.3e-68 264.6 759 53.6
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 5.1e-68 263.5 740 53.9
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 6.7e-68 263.1 753 47.0
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 6.7e-68 263.1 745 54.2
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 4.3e-67 260.4 750 48.9
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 1.6e-66 258.5 749 55.4
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 2.8e-66 257.7 462 54.1
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 2.8e-66 257.7 487 52.6
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 2.4e-65 254.6 727 45.1
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 5.9e-64 250.0 744 53.6
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 5.0e-63 246.9 743 45.8
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.9e-62 245.0 506 48.2
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 1.9e-62 245.0 750 48.1
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 9.4e-62 242.7 731 45.8
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 1.2e-61 242.3 749 42.2
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 2.7e-61 241.1 753 50.2
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 2.7e-61 241.1 749 45.1
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 4.6e-61 240.4 750 50.8
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 1.8e-60 238.4 502 57.6
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 2.3e-60 238.0 750 54.0
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 5.1e-60 236.9 751 52.5
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 8.8e-60 236.1 751 46.6
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.3e-59 234.2 755 46.2
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 4.3e-59 233.8 460 45.9
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 7.4e-59 233.0 509 47.7
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 1.7e-58 231.9 730 51.6
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 2.2e-58 231.5 502 57.0
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 3.7e-58 230.7 488 45.5
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 3.7e-58 230.7 488 45.5
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 4.8e-58 230.3 748 43.0
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 1.8e-57 228.4 501 45.5
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 4.1e-57 227.3 483 50.3
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.2e-56 225.7 482 53.3
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 5.9e-56 223.4 738 46.7
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 1.3e-55 222.2 381 52.8
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 2.2e-55 221.5 549 49.2
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 3.8e-55 220.7 479 45.3
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 3.8e-55 220.7 522 50.8
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 1.4e-54 218.8 742 50.3
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 1.0e-52 212.6 493 43.4
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 1.8e-52 211.8 746 46.4
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 3.9e-52 210.7 745 44.4
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 2.6e-51 208.0 492 54.1
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 5.7e-51 206.8 474 43.2
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.7e-50 205.3 452 46.0
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 2.8e-50 204.5 507 41.4
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 2.4e-41 174.9 727 48.0
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 2.0e-40 171.8 745 43.4
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 4.5e-40 170.6 754 48.8
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 4.5e-40 170.6 741 49.7
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 5.9e-40 170.2 731 44.3
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 1.7e-39 168.7 730 42.3
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.7e-39 168.7 734 49.5
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 1.7e-39 168.7 757 44.4
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 3.3e-35 154.5 340 52.9
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 4.8e-34 150.6 745 48.2
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 2.4e-33 148.3 744 46.5
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 2.7e-32 144.8 227 42.3
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 1.3e-31 142.5 199 45.2
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 5.0e-31 140.6 757 42.9
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 5.0e-31 140.6 479 46.1
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 1.1e-30 139.4 740 44.5
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 1.3e-26 125.9 137 59.1
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 5.9e-24 117.1 351 33.9
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 1.3e-23 115.9 219 41.1
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 1.5e-22 112.5 224 36.6
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 2.3e-20 105.1 710 46.5
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 2.4e-17 95.1 237 32.5
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 4.1e-17 94.4 710 41.3
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 7.0e-17 93.6 101 55.4
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 1.1e-14 86.3 484 32.9
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 9.5e-14 83.2 244 52.9
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.0e-12 79.7 317 28.1
Sabra18G0029000 Salix brachista HOM05D006421 ORTHO05D008268 2.6e-11 75.1 63 65.1
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.2e-10 72.0 136 41.9


User provided reference genes

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