Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0155500 Rhododendron simsii HOM05D003277 ORTHO05D003275 1.8e-48 195.7 103 100.0
TAR624G0051 Trochodendron aralioides HOM05D003277 ORTHO05D003275 3.8e-14 81.6 109 45.0
Nn8g39213 Nelumbo nucifera HOM05D003277 ORTHO05D003275 3.2e-13 78.6 117 41.0
Duzib150G1012 Durio zibethinus HOM05D000818 ORTHO05D003275 2.7e-12 75.5 98 43.9
Lsat_1_v5_gn_6_11260 Lactuca sativa HOM05D003277 ORTHO05D003275 3.5e-12 75.1 106 42.5
Oeu036629.1 Olea europaea HOM05D003277 ORTHO05D003275 6.0e-12 74.3 94 47.9
COL.COLO4_18709 Corchorus olitorius HOM05D003277 ORTHO05D003275 2.3e-11 72.4 98 41.8
Migut.A00248 Erythranthe guttata HOM05D003277 ORTHO05D003275 2.3e-11 72.4 95 43.2
Hma1.2p1_0018F.1_g013430 Hydrangea macrophylla HOM05D003277 ORTHO05D003275 2.3e-11 72.4 107 42.1
Dinv36618 Davidia involucrata HOM05D003277 ORTHO05D003275 3.9e-11 71.6 109 42.2
Nn2g11767 Nelumbo nucifera HOM05D003277 ORTHO05D003275 6.6e-11 70.9 115 40.0
MBI01_g34157_MAGBIO Magnolia biondii HOM05D003277 ORTHO05D003275 8.7e-11 70.5 106 38.7
MBI04_g08935_MAGBIO Magnolia biondii HOM05D003277 ORTHO05D003275 1.1e-10 70.1 101 43.6
Manes.16G066800 Manihot esculenta HOM05D003277 ORTHO05D003275 1.1e-10 70.1 111 41.4
Gohir.A07G024250 Gossypium hirsutum HOM05D003277 ORTHO05D003275 1.5e-10 69.7 91 42.9
Gohir.D07G027850 Gossypium hirsutum HOM05D003277 ORTHO05D003275 1.9e-10 69.3 91 41.8
Cfa003268 Carpinus fangiana HOM05D003277 ORTHO05D003275 2.5e-10 68.9 108 38.9
ClCG11G013950 Citrullus lanatus HOM05D003277 ORTHO05D003275 2.5e-10 68.9 102 43.1
Ca_15626_v3 Cicer arietinum L. HOM05D003277 ORTHO05D003275 3.3e-10 68.6 107 43.0
MELO3C003594.2 Cucumis melo HOM05D003277 ORTHO05D003275 3.3e-10 68.6 102 44.1
Gorai.001G029100 Gossypium raimondii HOM05D003277 ORTHO05D003275 3.3e-10 68.6 91 41.8
Prupe.1G454200 Prunus persica HOM05D003277 ORTHO05D003275 3.3e-10 68.6 103 40.8
Aqoxy7G01700 Aquilegia oxysepala HOM05D003277 ORTHO05D003275 5.6e-10 67.8 109 39.4
Sabra06G0191100 Salix brachista HOM05D003277 ORTHO05D003275 5.6e-10 67.8 99 39.4
CsaV3_3G047340 Cucumis sativus L. HOM05D002580 ORTHO05D002811 7.3e-10 67.4 102 43.1
Manes.03G064500 Manihot esculenta HOM05D003277 ORTHO05D003275 7.3e-10 67.4 104 41.3
Manes.03G064940 Manihot esculenta HOM05D003277 ORTHO05D003275 7.3e-10 67.4 104 41.3
Manes.16G117100 Manihot esculenta HOM05D003277 ORTHO05D003275 7.3e-10 67.4 102 39.2
Potri.006G244200 Populus trichocarpa HOM05D003277 ORTHO05D003275 7.3e-10 67.4 95 40.0
Thecc.09G038300 Theobroma cacao HOM05D003277 ORTHO05D003275 7.3e-10 67.4 97 41.2
TPR.G12111 Trifolium pratense HOM05D003277 ORTHO05D003275 7.3e-10 67.4 90 41.1
Gohir.A05G049100 Gossypium hirsutum HOM05D003277 ORTHO05D003275 9.6e-10 67.0 104 40.4
Phvul.002G313800 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 9.6e-10 67.0 92 44.6
Sc09g0008990 Simmondsia chinensis HOM05D003277 ORTHO05D003275 1.3e-09 66.6 111 37.8
Glyma.14G140500 Glycine max HOM05D003277 ORTHO05D003275 1.6e-09 66.2 89 42.7
RcHm_v2.0_Chr6g0305601 Rosa chinensis HOM05D003277 ORTHO05D003275 1.6e-09 66.2 105 37.1
Gohir.D05G051000 Gossypium hirsutum HOM05D003277 ORTHO05D003275 2.1e-09 65.9 104 40.4
Gorai.009G052600 Gossypium raimondii HOM05D003277 ORTHO05D003275 2.1e-09 65.9 104 40.4
SGA_v2.0_scaffold27G11531 Striga asiatica HOM05D003277 ORTHO05D003275 2.1e-09 65.9 95 41.1
EL10Ac2g02521 Beta vulgaris HOM05D003277 ORTHO05D003275 2.8e-09 65.5 90 41.1
Ciclev10009982m.g Citrus clementina HOM05D003277 ORTHO05D003275 3.6e-09 65.1 104 40.4
Hma1.2p1_0092F.1_g046645 Hydrangea macrophylla HOM05D003277 ORTHO05D003275 3.6e-09 65.1 99 39.4
Phvul.009G105000 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 3.6e-09 65.1 87 46.0
Psat0s1478g0280 Pisum sativum HOM05D003277 ORTHO05D003275 3.6e-09 65.1 106 39.6
Psat7g252160 Pisum sativum HOM05D003277 ORTHO05D003275 3.6e-09 65.1 67 53.7
Haze_21824 Corylus avellana HOM05D003277 ORTHO05D003275 4.8e-09 64.7 112 42.0
Glyma.04G079300 Glycine max HOM05D003277 ORTHO05D003275 4.8e-09 64.7 94 40.4
TPR.G27852 Trifolium pratense HOM05D003277 ORTHO05D003275 4.8e-09 64.7 112 39.3
Glyma.05G231600 Glycine max HOM05D003277 ORTHO05D003275 8.1e-09 63.9 102 39.2
SGA_v2.0_scaffold5G02589 Striga asiatica HOM05D003277 ORTHO05D003275 8.1e-09 63.9 78 44.9
Haze_25704 Corylus avellana HOM05D000750 ORTHO05D000714 1.4e-08 63.2 100 40.0
arahy.Tifrunner.gnm1.ann1.R7R2S9 Arachis hypogaea HOM05D003277 ORTHO05D003275 1.8e-08 62.8 105 43.8
Cfa013333 Carpinus fangiana HOM05D003277 ORTHO05D003275 1.8e-08 62.8 108 40.7
VMungo0251G2336 Vigna mungo HOM05D003277 ORTHO05D003275 2.4e-08 62.4 101 39.6
CiPaw.08G022600 Carya illinoinensis HOM05D003277 ORTHO05D003275 3.1e-08 62.0 102 38.2
Migut.D01029 Erythranthe guttata HOM05D003277 ORTHO05D003275 3.1e-08 62.0 106 37.7
Atru.chr7.2298 Acer truncatum HOM05D003277 ORTHO05D003275 5.3e-08 61.2 100 39.0
TPR.G24192 Trifolium pratense HOM05D003277 ORTHO05D003275 5.3e-08 61.2 69 49.3
FAN26G0013 Fragaria x ananassa HOM05D003277 ORTHO05D003275 6.9e-08 60.8 109 36.7
QL05p023505 Quercus lobata HOM05D003277 ORTHO05D003275 6.9e-08 60.8 72 45.8
Lalb_Chr23g0269371 Lupinus albus HOM05D003277 ORTHO05D003275 9.0e-08 60.5 104 35.6
Medtr4g012510 Medicago truncatula HOM05D003277 ORTHO05D003275 9.0e-08 60.5 69 47.8
Oeu033486.1 Olea europaea HOM05D003277 ORTHO05D003275 9.0e-08 60.5 109 37.6
Psat7g252200 Pisum sativum HOM05D003277 ORTHO05D003275 9.0e-08 60.5 67 49.3
QL02p085574 Quercus lobata HOM05D003277 ORTHO05D003275 9.0e-08 60.5 97 39.2
PGSC0003DMG400016508 Solanum tuberosum HOM05D003277 ORTHO05D003275 1.2e-07 60.1 106 39.6
ATR1120G160 Amborella trichopoda HOM05D003277 ORTHO05D003275 1.5e-07 59.7 99 42.4
Eucgr.C02884 Eucalyptus grandis HOM05D003277 ORTHO05D003275 1.5e-07 59.7 101 36.6
FvH4_2g36280 Fragaria vesca HOM05D003277 ORTHO05D003275 1.5e-07 59.7 107 39.3
FAN15G2136 Fragaria x ananassa HOM05D003277 ORTHO05D003275 1.5e-07 59.7 105 37.1
FAN27G2228 Fragaria x ananassa HOM05D003277 ORTHO05D003275 1.5e-07 59.7 107 39.3
Lj1g0024029 Lotus japonicus HOM05D003277 ORTHO05D003275 1.5e-07 59.7 100 39.0
Thecc.06G088500 Theobroma cacao HOM05D003277 ORTHO05D003275 1.5e-07 59.7 107 37.4
vmacro18909 Vaccinium macrocarpon HOM05D003277 ORTHO05D003275 1.5e-07 59.7 76 44.7
Ciclev10026796m.g Citrus clementina HOM05D003277 ORTHO05D003275 2.0e-07 59.3 109 37.6
Duzib235G0396 Durio zibethinus HOM05D003277 ORTHO05D003275 2.0e-07 59.3 105 39.0
Psat7g252120 Pisum sativum HOM05D003277 ORTHO05D003275 2.0e-07 59.3 67 49.3
Atru.chr1.3275 Acer truncatum HOM05D003277 ORTHO05D003275 2.6e-07 58.9 70 47.1
Duzib150G0682 Durio zibethinus HOM05D003277 ORTHO05D003275 2.6e-07 58.9 108 37.0
FvH4_1g05060 Fragaria vesca HOM05D003277 ORTHO05D003275 2.6e-07 58.9 109 37.6
FAN19G2424 Fragaria x ananassa HOM05D000750 ORTHO05D000714 2.6e-07 58.9 109 37.6
FAN20G0113 Fragaria x ananassa HOM05D003277 ORTHO05D003275 2.6e-07 58.9 105 37.1
FAN28G0377 Fragaria x ananassa HOM05D000750 ORTHO05D000714 2.6e-07 58.9 107 37.4
Medtr3g109430 Medicago truncatula HOM05D003277 ORTHO05D003275 2.6e-07 58.9 110 36.4
ATR1120G013 Amborella trichopoda HOM05D003277 ORTHO05D003275 3.4e-07 58.5 99 43.4
Glyma.06G080800 Glycine max HOM05D003277 ORTHO05D003275 3.4e-07 58.5 93 37.6
ATR1120G137 Amborella trichopoda HOM05D003277 ORTHO05D003275 4.5e-07 58.2 64 50.0
ATR1120G144 Amborella trichopoda HOM05D003277 ORTHO05D003275 4.5e-07 58.2 70 48.6
ATR1120G187 Amborella trichopoda HOM05D003277 ORTHO05D003275 4.5e-07 58.2 89 38.2
COL.COLO4_30383 Corchorus olitorius HOM05D003277 ORTHO05D003275 4.5e-07 58.2 75 46.7
Medtr4g012350 Medicago truncatula HOM05D003277 ORTHO05D003275 4.5e-07 58.2 67 50.7
Sed0006476 Sechium edule HOM05D003277 ORTHO05D003275 4.5e-07 58.2 95 43.2
TPR.G39760 Trifolium pratense HOM05D003277 ORTHO05D003275 4.5e-07 58.2 70 50.0
COL.COLO4_34902 Corchorus olitorius HOM05D003277 ORTHO05D003275 5.8e-07 57.8 117 35.9
Gohir.D05G129700 Gossypium hirsutum HOM05D003277 ORTHO05D003275 5.8e-07 57.8 73 42.5
Gorai.009G133500 Gossypium raimondii HOM05D003277 ORTHO05D003275 5.8e-07 57.8 73 42.5
Lj3g0000153 Lotus japonicus HOM05D003277 ORTHO05D003275 5.8e-07 57.8 68 48.5
Cpa.g.sc205.7 Carica papaya HOM05D003277 ORTHO05D003275 7.6e-07 57.4 93 40.9
Gohir.A05G130300 Gossypium hirsutum HOM05D003277 ORTHO05D003275 7.6e-07 57.4 73 42.5
Nitab4.5_0003537g0060 Nicotiana tabacum HOM05D003277 ORTHO05D003275 7.6e-07 57.4 102 37.3
PGSC0003DMG400005684 Solanum tuberosum HOM05D003277 ORTHO05D003275 7.6e-07 57.4 110 37.3
Thecc.09G112200 Theobroma cacao HOM05D003277 ORTHO05D003275 7.6e-07 57.4 112 36.6
Migut.I00868 Erythranthe guttata HOM05D003277 ORTHO05D003275 9.9e-07 57.0 72 41.7
Medtr4g012460 Medicago truncatula HOM05D003277 ORTHO05D003275 9.9e-07 57.0 68 45.6
Oeu063975.1 Olea europaea HOM05D003277 ORTHO05D003275 9.9e-07 57.0 69 47.8
Oeu063976.1 Olea europaea HOM05D003277 ORTHO05D003275 9.9e-07 57.0 69 47.8
Prupe.3G070700 Prunus persica HOM05D003277 ORTHO05D003275 9.9e-07 57.0 66 45.5
Glyma.13G359300 Glycine max HOM05D003277 ORTHO05D003275 1.3e-06 56.6 75 45.3
DCAR_010449 Daucus carota HOM05D003277 ORTHO05D003275 1.7e-06 56.2 101 32.7
FAN23G0772 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.7e-06 56.2 109 35.8
Medtr4g012490 Medicago truncatula HOM05D003277 ORTHO05D003275 1.7e-06 56.2 68 45.6
Rhsim08G0221600 Rhododendron simsii HOM05D003277 ORTHO05D003275 1.7e-06 56.2 75 44.0
Sopen06g025000 Solanum pennellii HOM05D003277 ORTHO05D003275 2.2e-06 55.8 104 37.5
VMungo1080G1196 Vigna mungo HOM05D003111 ORTHO05D003502 2.2e-06 55.8 74 44.6
CAN.G438.69 Capsicum annuum HOM05D003277 ORTHO05D003275 2.9e-06 55.5 85 40.0
Solyc03g120170.1 Solanum lycopersicum HOM05D003277 ORTHO05D003275 2.9e-06 55.5 110 37.3
TPR.G39761 Trifolium pratense HOM05D003277 ORTHO05D003275 2.9e-06 55.5 70 47.1
Glyma.07G087300 Glycine max HOM05D003277 ORTHO05D003275 3.8e-06 55.1 64 46.9
Manes.04G123700 Manihot esculenta HOM05D003277 ORTHO05D003275 3.8e-06 55.1 68 47.1
Medtr8g083490 Medicago truncatula HOM05D003277 ORTHO05D003275 3.8e-06 55.1 78 44.9
Peaxi162Scf00015g00042 Petunia axillaris HOM05D003277 ORTHO05D003275 3.8e-06 55.1 99 39.4
Sopen12g003040 Solanum pennellii HOM05D003277 ORTHO05D003275 3.8e-06 55.1 110 34.5
Cc04_g03410 Coffea canephora HOM05D003277 ORTHO05D003275 4.9e-06 54.7 66 45.5
Potri.001G180500 Populus trichocarpa HOM05D003277 ORTHO05D003275 4.9e-06 54.7 112 38.4
Sopen12g003020 Solanum pennellii HOM05D003277 ORTHO05D003275 6.4e-06 54.3 98 37.8
Actinidia32754 Actinidia chinensis HOM05D003277 ORTHO05D003275 8.4e-06 53.9 70 47.1
Cc02_g27850 Coffea canephora HOM05D003277 ORTHO05D003275 8.4e-06 53.9 66 45.5
CsaV3_1G030570 Cucumis sativus L. HOM05D003277 ORTHO05D003275 8.4e-06 53.9 90 38.9
Manes.11G047000 Manihot esculenta HOM05D003277 ORTHO05D003275 8.4e-06 53.9 69 44.9
Nitab4.5_0000671g0120 Nicotiana tabacum HOM05D003277 ORTHO05D003275 8.4e-06 53.9 73 45.2
Nitab4.5_0005851g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 8.4e-06 53.9 73 45.2
RcHm_v2.0_Chr2g0137921 Rosa chinensis HOM05D003277 ORTHO05D003275 8.4e-06 53.9 72 43.1
Sc21g0005130 Simmondsia chinensis HOM05D003277 ORTHO05D003275 8.4e-06 53.9 109 39.4
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 8.4e-06 53.9 69 44.9


User provided reference genes

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