Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 1.1e-118 429.9 208 100.0
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 7.4e-94 347.4 208 82.2
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 2.7e-88 328.9 211 77.7
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 8.0e-88 327.4 204 78.4
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 1.5e-86 323.2 213 77.5
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 1.1e-84 317.0 208 75.5
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 7.7e-83 310.8 208 75.0
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.7e-82 309.7 212 72.2
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.9e-81 306.2 216 71.8
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 3.2e-81 305.4 208 73.1
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 5.5e-81 304.7 209 73.7
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 9.4e-81 303.9 212 72.6
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 1.2e-80 303.5 214 73.4
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 2.1e-80 302.8 215 71.2
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 2.1e-80 302.8 210 73.3
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.7e-80 302.4 209 73.2
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 3.6e-80 302.0 209 73.2
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 3.6e-80 302.0 213 72.3
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 4.7e-80 301.6 215 70.7
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 6.1e-80 301.2 212 72.6
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 6.1e-80 301.2 212 71.7
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 1.0e-79 300.4 212 70.8
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.4e-79 300.1 209 72.2
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.8e-79 299.7 209 72.7
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 2.3e-79 299.3 208 70.7
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 2.3e-79 299.3 198 76.3
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 2.3e-79 299.3 211 71.1
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 8.8e-79 297.4 210 72.4
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 1.2e-78 297.0 205 71.2
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.2e-78 297.0 209 71.3
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.5e-78 296.6 213 70.4
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 1.5e-78 296.6 205 72.7
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 1.5e-78 296.6 206 70.9
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 2.0e-78 296.2 213 70.0
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 2.0e-78 296.2 216 71.3
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 2.6e-78 295.8 213 70.0
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 3.3e-78 295.4 183 76.5
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 3.3e-78 295.4 210 71.9
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 4.4e-78 295.0 214 72.0
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 5.7e-78 294.7 213 70.0
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 5.7e-78 294.7 213 70.0
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 5.7e-78 294.7 213 70.0
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 5.7e-78 294.7 198 72.7
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 7.5e-78 294.3 211 72.5
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 1.3e-77 293.5 190 73.7
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.7e-77 293.1 205 72.7
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 2.2e-77 292.7 213 69.5
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 2.2e-77 292.7 181 75.7
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 2.2e-77 292.7 198 74.2
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 2.8e-77 292.4 209 71.8
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.8e-77 292.4 202 75.2
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 3.7e-77 292.0 211 69.2
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 3.7e-77 292.0 212 68.9
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 3.1e-76 288.9 211 70.1
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 5.3e-76 288.1 185 74.6
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 9.1e-76 287.3 227 66.5
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 9.1e-76 287.3 210 68.1
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 1.2e-75 287.0 202 69.8
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 1.6e-75 286.6 224 67.9
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 2.0e-75 286.2 184 72.8
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 2.0e-75 286.2 210 69.0
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 2.7e-75 285.8 190 70.5
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 3.5e-75 285.4 200 69.5
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 3.5e-75 285.4 165 84.8
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 5.9e-75 284.6 211 68.7
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.9e-75 284.6 206 68.9
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 1.3e-74 283.5 210 69.0
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 1.3e-74 283.5 210 70.0
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 6.5e-74 281.2 192 73.4
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.5e-73 280.0 204 68.6
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 2.5e-73 279.3 196 68.4
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 4.2e-73 278.5 220 64.5
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 7.2e-73 277.7 230 62.2
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 7.2e-73 277.7 198 68.2
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 1.2e-72 276.9 183 70.5
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 1.2e-72 276.9 198 67.2
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 1.6e-72 276.6 214 65.0
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 1.4e-71 273.5 183 69.9
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 4.4e-70 268.5 187 71.7
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 1.7e-69 266.5 182 73.1
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 6.3e-69 264.6 165 76.4
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 3.3e-65 252.3 207 62.3
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 4.2e-65 251.9 187 65.2
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 1.8e-63 246.5 181 70.2
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 3.0e-63 245.7 180 70.0
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 8.9e-63 244.2 172 72.7
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 4.4e-62 241.9 175 69.7
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 3.7e-61 238.8 153 72.5
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 6.3e-61 238.0 150 76.0
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 2.7e-59 232.6 193 59.1
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 4.5e-59 231.9 149 72.5
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 4.3e-57 225.3 173 67.6
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 1.6e-56 223.4 180 62.8
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 3.6e-56 222.2 166 63.3
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 8.0e-56 221.1 162 66.0
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 3.7e-53 212.2 184 56.5
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 6.4e-53 211.5 164 64.6
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 6.6e-50 201.4 123 77.2
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 8.3e-45 184.5 175 53.1
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 1.1e-39 167.5 151 58.3
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 1.0e-26 124.4 157 40.8
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 7.8e-19 98.2 165 43.0
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 3.0e-10 69.7 145 35.2
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 2.5e-09 66.6 38 76.3
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 6.9e-07 58.5 143 30.8
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 5.8e-06 55.5 103 42.7


User provided reference genes

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