Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0150600 Rhododendron simsii HOM05D011308 ORTHO05D000224 8.6e-162 573.5 282 100.0
Rhsim11G0010200 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.4e-55 219.9 331 43.2
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.2e-22 111.3 419 23.4
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 8.7e-21 105.1 424 22.9
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 1.6e-19 100.9 140 40.7
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.7e-19 99.8 145 39.3
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 1.4e-18 97.8 140 40.0
Rhsim11G0064300 Rhododendron simsii HOM05D000004 ORTHO05D000034 2.0e-17 94.0 259 26.3
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 2.9e-16 90.1 173 32.9
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 8.4e-16 88.6 150 36.0
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.1e-15 88.2 121 40.5
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 7.1e-15 85.5 172 32.0
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 9.3e-15 85.1 138 34.8
Rhsim13G0172900 Rhododendron simsii HOM05D000004 ORTHO05D000224 9.3e-15 85.1 249 29.7
Rhsim03G0014100 Rhododendron simsii HOM05D011494 ORTHO05D000034 3.5e-14 83.2 229 28.4
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.3e-13 80.5 239 26.4
Rhsim13G0139200 Rhododendron simsii HOM05D002352 ORTHO05D000224 8.7e-13 78.6 257 27.6
Ca_18134_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.9e-12 77.4 238 25.6
Oeu060138.1 Olea europaea HOM05D000004 ORTHO05D000224 2.5e-12 77.0 98 33.7
RhsimUnG0157800 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.3e-11 74.7 134 33.6
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 6.3e-11 72.4 98 37.8
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 6.3e-11 72.4 135 28.9
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.3e-11 72.4 134 32.8
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.4e-10 71.2 139 29.5
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.8e-10 70.9 139 29.5
CSS0031723 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 3.1e-10 70.1 231 24.7
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 3.1e-10 70.1 135 28.1
CSS0049314 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.1e-10 69.7 336 23.2
Rhsim02G0147300 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.3e-10 69.3 166 28.9
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 2.0e-09 67.4 123 35.8
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 2.6e-09 67.0 113 33.6
Rhsim12G0125400 Rhododendron simsii HOM05D010253 ORTHO05D000224 2.6e-09 67.0 81 35.8
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.5e-09 66.2 149 29.5
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 5.9e-09 65.9 145 32.4
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.9e-09 65.9 115 32.2
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.6e-09 65.5 145 29.0
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 7.6e-09 65.5 171 26.3
Rhsim09G0094400 Rhododendron simsii HOM05D020422 ORTHO05D030533 7.6e-09 65.5 208 27.9
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.6e-09 65.5 144 28.5
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.0e-08 65.1 145 29.0
ECA233G0515 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-08 64.7 264 24.6
CSS0003773 Camellia sinensis var. sinensis HOM05D001025 ORTHO05D000224 1.7e-08 64.3 56 51.8
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.7e-08 64.3 145 29.0
PGR031G1649 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-08 64.3 248 23.4
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-08 63.9 209 29.2
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-08 63.9 160 28.1
Hma1.2p1_0038F.1_g024310 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.9e-08 63.5 132 28.8
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 2.9e-08 63.5 144 28.5
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-08 63.2 162 26.5
Rhsim11G0030500 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.8e-08 63.2 128 31.2
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.5e-08 62.4 126 30.2
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 8.4e-08 62.0 125 30.4
Ca_08668_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 8.4e-08 62.0 200 27.5
Ca_20013_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 8.4e-08 62.0 211 24.6
Hma1.2p1_0142F.1_g064210 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 8.4e-08 62.0 68 38.2
CSS0000058 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 1.1e-07 61.6 89 39.3
CSS0021717 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-07 61.6 184 26.6
CSS0042251 Camellia sinensis var. sinensis HOM05D013810 ORTHO05D000224 1.1e-07 61.6 56 46.4
Ca_13949_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.1e-07 61.6 232 22.4
Hma1.2p1_0032F.1_g019000 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.1e-07 61.6 67 40.3
Rhsim13G0139600 Rhododendron simsii HOM05D011308 ORTHO05D000224 1.1e-07 61.6 58 44.8
TPR.G10238 Trifolium pratense HOM05D000004 ORTHO05D000224 1.1e-07 61.6 56 50.0
Ca_19997_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 1.4e-07 61.2 222 21.2
Medtr1914s0010 Medicago truncatula HOM05D008853 ORTHO05D000224 1.4e-07 61.2 157 31.2
Rhsim05G0123900 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.4e-07 61.2 99 32.3
Sopen07g011410 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-07 61.2 262 24.4
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-07 60.8 88 34.1
CSS0037828 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 1.9e-07 60.8 169 29.6
CSS0007018 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.5e-07 60.5 131 28.2
CSS0019263 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-07 60.5 97 32.0
CSS0031221 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 2.5e-07 60.5 179 31.8
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.5e-07 60.5 67 38.8
CSS0001821 Camellia sinensis var. sinensis HOM05D012368 ORTHO05D000224 3.2e-07 60.1 52 48.1
Cpa.g.sc1.420 Carica papaya HOM05D016211 ORTHO05D000224 3.2e-07 60.1 108 28.7
Hma1.2p1_0079F.1_g041840 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.2e-07 60.1 57 43.9
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.2e-07 59.7 131 28.2
Ca_03089_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.2e-07 59.7 212 22.2
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.2e-07 59.7 67 38.8
Hma1.2p1_1484F.1_g286305 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.2e-07 59.7 61 42.6
Hma1.2p1_1716F.1_g299145 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.2e-07 59.7 61 42.6
Hma1.2p1_1869F.1_g306055 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.2e-07 59.7 61 42.6
Medtr1g053380 Medicago truncatula HOM05D008853 ORTHO05D000224 5.5e-07 59.3 114 34.2
CSS0006242 Camellia sinensis var. sinensis HOM05D013810 ORTHO05D000224 7.2e-07 58.9 52 48.1
CSS0015113 Camellia sinensis var. sinensis HOM05D013810 ORTHO05D000224 7.2e-07 58.9 78 38.5
MELO3C029662.2 Cucumis melo HOM05D007786 ORTHO05D009980 7.2e-07 58.9 98 31.6
Hma1.2p1_1167F.1_g263020 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 7.2e-07 58.9 106 30.2
Rhsim05G0131200 Rhododendron simsii HOM05D011308 ORTHO05D000224 7.2e-07 58.9 62 38.7
CSS0010782 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 9.3e-07 58.5 65 41.5
CSS0025915 Camellia sinensis var. sinensis HOM05D013810 ORTHO05D000224 1.2e-06 58.2 52 46.2
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.2e-06 58.2 131 29.8
Hund30387 Selenicereus undatus HOM05D008371 ORTHO05D000224 1.2e-06 58.2 141 31.9
Hund30480 Selenicereus undatus HOM05D008371 ORTHO05D000224 1.2e-06 58.2 141 31.9
Hund30481 Selenicereus undatus HOM05D008371 ORTHO05D000224 1.2e-06 58.2 141 31.9
Hund30482 Selenicereus undatus HOM05D008371 ORTHO05D000224 1.2e-06 58.2 108 36.1
Hund30483 Selenicereus undatus HOM05D008371 ORTHO05D000224 1.2e-06 58.2 108 36.1
CSS0018938 Camellia sinensis var. sinensis HOM05D013810 ORTHO05D000224 1.6e-06 57.8 52 46.2
Ca_04624_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.6e-06 57.8 94 36.2
Hma1.2p1_0096F.1_g047910 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 1.6e-06 57.8 61 41.0
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 1.6e-06 57.8 106 34.9
Hund30558 Selenicereus undatus HOM05D008371 ORTHO05D000224 1.6e-06 57.8 108 36.1
CSS0025121 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.1e-06 57.4 65 40.0
Ca_28410_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 2.1e-06 57.4 112 29.5
Hma1.2p1_0381F.1_g140020 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.1e-06 57.4 87 34.5
Hund28234 Selenicereus undatus HOM05D008371 ORTHO05D000224 2.1e-06 57.4 108 36.1
Hund30141 Selenicereus undatus HOM05D008371 ORTHO05D000224 2.1e-06 57.4 108 36.1
Hund30225 Selenicereus undatus HOM05D009385 ORTHO05D000224 2.1e-06 57.4 108 36.1
Hund30380 Selenicereus undatus HOM05D008371 ORTHO05D000224 2.1e-06 57.4 108 36.1
Hund30384 Selenicereus undatus HOM05D008371 ORTHO05D000224 2.1e-06 57.4 108 36.1
Hund30391 Selenicereus undatus HOM05D008371 ORTHO05D010888 2.1e-06 57.4 108 36.1
Hund30460 Selenicereus undatus HOM05D008371 ORTHO05D010888 2.1e-06 57.4 108 36.1
Oeu050910.1 Olea europaea HOM05D000004 ORTHO05D000224 2.7e-06 57.0 57 38.6
Sopen07g005720 Solanum pennellii HOM05D000004 ORTHO05D000034 2.7e-06 57.0 120 30.0
CSS0037413 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 3.5e-06 56.6 65 38.5
ECA232G1378 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.5e-06 56.6 97 34.0
Hma1.2p1_0866F.1_g230150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.5e-06 56.6 60 41.7
Oeu047631.1 Olea europaea HOM05D000004 ORTHO05D000224 3.5e-06 56.6 57 38.6
Hund04381 Selenicereus undatus HOM05D008371 ORTHO05D000224 3.5e-06 56.6 108 32.4
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 4.6e-06 56.2 154 24.7
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 4.6e-06 56.2 154 24.7
Sopen09g014020 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-06 56.2 281 22.4
CSS0016766 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 6.1e-06 55.8 89 33.7
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 6.1e-06 55.8 51 45.1
Oeu011745.1 Olea europaea HOM05D000004 ORTHO05D000224 6.1e-06 55.8 57 38.6
Oeu032736.1 Olea europaea HOM05D000004 ORTHO05D000224 6.1e-06 55.8 57 38.6
Oeu051746.1 Olea europaea HOM05D000004 ORTHO05D000224 6.1e-06 55.8 57 38.6
PSO017G0809 Papaver somniferum HOM05D023523 ORTHO05D000224 6.1e-06 55.8 57 45.6
Hund30297 Selenicereus undatus HOM05D008371 ORTHO05D000224 6.1e-06 55.8 108 35.2
Hund30452 Selenicereus undatus HOM05D008371 ORTHO05D000224 6.1e-06 55.8 107 32.7
CSS0033194 Camellia sinensis var. sinensis HOM05D012166 ORTHO05D015543 7.9e-06 55.5 160 31.2
Oeu000946.1 Olea europaea HOM05D000004 ORTHO05D000224 7.9e-06 55.5 70 37.1
PSO170G5394 Papaver somniferum HOM05D000004 ORTHO05D000002 7.9e-06 55.5 96 30.2
Hund30378 Selenicereus undatus HOM05D008371 ORTHO05D000224 7.9e-06 55.5 85 36.5
TPR.G14107 Trifolium pratense HOM05D000004 ORTHO05D000002 7.9e-06 55.5 254 24.4


User provided reference genes

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