Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0149700 Rhododendron simsii HOM05D005586 ORTHO05D007044 0.0e+00 1316.2 676 100.0
CSS0030464 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 7.5e-305 1050.0 623 86.4
CSS0000496 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 6.4e-296 1020.4 623 84.4
Dinv41251 Davidia involucrata HOM05D005586 ORTHO05D007044 3.5e-294 1014.6 623 83.9
Dinv25464 Davidia involucrata HOM05D005586 ORTHO05D007044 4.3e-292 1007.7 623 82.8
Lj9P685T24 Lonicera japonica HOM05D005586 ORTHO05D007044 2.4e-279 965.3 629 79.8
Hma1.2p1_1025F.1_g249260 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 3.3e-276 954.9 587 84.0
DCAR_017968 Daucus carota HOM05D005586 ORTHO05D007044 1.3e-272 943.0 626 78.1
TAR626G0800 Trochodendron aralioides HOM05D005586 ORTHO05D007044 1.3e-272 943.0 627 76.7
TAR383G0761 Trochodendron aralioides HOM05D005586 ORTHO05D007044 3.2e-271 938.3 628 76.4
Lj7P472T26 Lonicera japonica HOM05D005586 ORTHO05D007044 7.4e-268 927.2 631 76.5
ECA234G4574 Erigeron canadensis HOM05D005586 ORTHO05D007044 9.0e-266 920.2 627 76.9
TWI60G0698 Tripterygium wilfordii HOM05D005586 ORTHO05D007044 1.5e-265 919.5 646 74.6
Aqoxy7G02326 Aquilegia oxysepala HOM05D005586 ORTHO05D007044 2.2e-264 915.6 626 75.2
Potri.006G168200 Populus trichocarpa HOM05D005586 ORTHO05D007044 1.9e-263 912.5 654 73.5
Lalb_Chr12g0199381 Lupinus albus HOM05D005586 ORTHO05D007044 3.2e-263 911.8 632 75.0
Lj4g0013239 Lotus japonicus HOM05D005586 ORTHO05D007044 1.3e-261 906.4 629 74.1
PSO170G6484 Papaver somniferum HOM05D005586 ORTHO05D007044 3.9e-261 904.8 629 74.4
Sabra06G0129800 Salix brachista HOM05D005586 ORTHO05D007044 1.1e-260 903.3 654 73.2
arahy.Tifrunner.gnm1.ann1.F5X18S Arachis hypogaea HOM05D005586 ORTHO05D007044 2.5e-260 902.1 632 74.4
Atru.chr7.639 Acer truncatum HOM05D005586 ORTHO05D007044 4.3e-260 901.4 642 74.6
Lsat_1_v5_gn_5_84680 Lactuca sativa HOM05D005586 ORTHO05D007044 4.3e-260 901.4 630 74.6
ClCG06G013320 Citrullus lanatus HOM05D005586 ORTHO05D007044 1.6e-259 899.4 641 72.7
MELO3C017465.2 Cucumis melo HOM05D005586 ORTHO05D007044 1.6e-259 899.4 641 72.7
Nn4g25000 Nelumbo nucifera HOM05D005586 ORTHO05D007044 2.2e-259 899.0 666 71.2
PSO063G4043 Papaver somniferum HOM05D005586 ORTHO05D007044 2.8e-259 898.7 629 73.9
Sed0005590 Sechium edule HOM05D005586 ORTHO05D007044 6.3e-259 897.5 641 73.9
Cpa.g.sc95.50 Carica papaya HOM05D005586 ORTHO05D007044 1.4e-258 896.3 633 74.9
CsaV3_1G031580 Cucumis sativus L. HOM05D005586 ORTHO05D007044 3.1e-258 895.2 641 72.4
Duzib168G0896 Durio zibethinus HOM05D005586 ORTHO05D007044 3.1e-258 895.2 641 74.6
Glyma.17G063500 Glycine max HOM05D005586 ORTHO05D007044 3.1e-258 895.2 627 73.8
COL.COLO4_33680 Corchorus olitorius HOM05D005586 ORTHO05D007044 2.6e-257 892.1 640 73.8
Nitab4.5_0000730g0080 Nicotiana tabacum HOM05D005586 ORTHO05D007044 2.6e-257 892.1 641 73.0
Ca_21173_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 1.0e-256 890.2 629 73.3
Ca_21222_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 1.0e-256 890.2 629 73.3
Prupe.2G007900 Prunus persica HOM05D005586 ORTHO05D007044 2.2e-256 889.0 651 71.9
Peaxi162Scf00231g00064 Petunia axillaris HOM05D005586 ORTHO05D007044 2.9e-256 888.6 641 73.2
Sed0016049 Sechium edule HOM05D005586 ORTHO05D007044 5.0e-256 887.9 642 72.4
Gohir.A08G084500 Gossypium hirsutum HOM05D005586 ORTHO05D007044 8.5e-256 887.1 643 73.1
Gorai.004G099900 Gossypium raimondii HOM05D005586 ORTHO05D007044 1.4e-255 886.3 643 73.3
RcHm_v2.0_Chr4g0402481 Rosa chinensis HOM05D005586 ORTHO05D007044 1.4e-255 886.3 642 72.9
Nitab4.5_0004134g0010 Nicotiana tabacum HOM05D005586 ORTHO05D007044 3.2e-255 885.2 637 73.2
Glyma.20G083600 Glycine max HOM05D005586 ORTHO05D007044 4.2e-255 884.8 626 73.3
Phvul.003G146100 Phaseolus vulgaris HOM05D005586 ORTHO05D007044 9.4e-255 883.6 627 73.8
Eucgr.C02307 Eucalyptus grandis HOM05D005586 ORTHO05D007044 1.2e-254 883.2 643 71.2
Medtr4g128210 Medicago truncatula HOM05D005586 ORTHO05D007044 2.1e-254 882.5 629 73.0
VMungo1215G0758 Vigna mungo HOM05D005586 ORTHO05D007044 2.7e-254 882.1 623 74.6
Psat0s509g0200 Pisum sativum HOM05D005586 ORTHO05D007044 4.6e-254 881.3 628 72.5
CANSAT11G2700 Cannabis sativa HOM05D005586 ORTHO05D007044 3.0e-253 878.6 638 71.3
FAN08G2362 Fragaria x ananassa HOM05D005586 ORTHO05D007044 3.9e-253 878.2 641 72.7
Ciclev10007551m.g Citrus clementina HOM05D005586 ORTHO05D007044 5.1e-253 877.9 645 72.1
Sc08g0005320 Simmondsia chinensis HOM05D005586 ORTHO05D007044 6.7e-253 877.5 625 73.4
Nitab4.5_0000455g0040 Nicotiana tabacum HOM05D005586 ORTHO05D007044 8.8e-253 877.1 637 72.7
Manes.14G153700 Manihot esculenta HOM05D005586 ORTHO05D007044 1.1e-252 876.7 632 72.8
Solyc10g078790.1 Solanum lycopersicum HOM05D005586 ORTHO05D007044 1.1e-252 876.7 639 72.0
PGSC0003DMG400011415 Solanum tuberosum HOM05D005586 ORTHO05D007044 1.1e-252 876.7 639 71.8
FAN18G4074 Fragaria x ananassa HOM05D005586 ORTHO05D007044 1.5e-252 876.3 643 72.2
Sopen10g029410 Solanum pennellii HOM05D005586 ORTHO05D007044 2.5e-252 875.5 639 71.8
FvH4_5g27790 Fragaria vesca HOM05D005586 ORTHO05D007044 3.3e-252 875.2 643 72.0
MD13G1254800 Malus domestica HOM05D005586 ORTHO05D007044 3.7e-251 871.7 639 72.0
Ah.14g083790 Amaranthus hybridus HOM05D005586 ORTHO05D007044 1.1e-250 870.2 634 71.6
SGA_v2.0_scaffold17G07909 Striga asiatica HOM05D005586 ORTHO05D007044 1.8e-250 869.4 646 70.4
Actinidia15717 Actinidia chinensis HOM05D005586 ORTHO05D007044 2.4e-250 869.0 614 75.2
CiPaw.07G192200 Carya illinoinensis HOM05D005586 ORTHO05D007044 5.3e-250 867.8 644 72.2
Oeu025223.1 Olea europaea HOM05D005586 ORTHO05D007044 5.3e-250 867.8 641 72.1
PGR102G3328 Punica granatum HOM05D005586 ORTHO05D007044 1.5e-249 866.3 630 72.2
Cc06_g13260 Coffea canephora HOM05D005586 ORTHO05D007044 2.6e-249 865.5 643 72.9
MSTRG.6212 Avicennia marina HOM05D005586 ORTHO05D007044 3.4e-249 865.1 637 71.3
GSVIVG01029208001 Vitis vinifera HOM05D005586 ORTHO05D007044 1.7e-248 862.8 627 72.9
Thecc.09G173100 Theobroma cacao HOM05D005586 ORTHO05D007044 2.9e-248 862.1 631 73.4
EL10Ac8g18286 Beta vulgaris HOM05D005586 ORTHO05D007044 2.5e-247 859.0 643 70.5
CAN.G1161.32 Capsicum annuum HOM05D005586 ORTHO05D007044 4.2e-247 858.2 643 70.1
Oeu009835.1 Olea europaea HOM05D005586 ORTHO05D007044 1.4e-245 853.2 641 71.1
Haze_22099 Corylus avellana HOM05D005586 ORTHO05D007044 2.3e-245 852.4 640 70.8
Migut.J01477 Erythranthe guttata HOM05D005586 ORTHO05D007044 6.7e-245 850.9 637 68.9
Cfa013507 Carpinus fangiana HOM05D005586 ORTHO05D007044 2.0e-244 849.4 642 70.2
QL02p097708 Quercus lobata HOM05D005586 ORTHO05D007044 2.8e-243 845.5 645 70.9
Aa31LG3G13340 Aethionema arabicum HOM05D005586 ORTHO05D007044 1.4e-242 843.2 642 69.3
THA.LOC104811789 Tarenaya hassleriana HOM05D005586 ORTHO05D007044 4.1e-242 841.6 643 69.1
MBI03_g13495_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 7.2e-239 830.9 635 68.8
AL8G33420 Arabidopsis lyrata HOM05D005586 ORTHO05D007044 6.1e-238 827.8 646 67.8
BcaB08g36100 Brassica carinata HOM05D005586 ORTHO05D007044 6.1e-238 827.8 642 68.7
Actinidia14649 Actinidia chinensis HOM05D005586 ORTHO05D007044 8.0e-238 827.4 530 82.3
CARHR271250 Cardamine hirsuta HOM05D005586 ORTHO05D007044 3.9e-237 825.1 653 66.8
BcaB01g04458 Brassica carinata HOM05D005586 ORTHO05D007044 3.3e-236 822.0 643 67.0
C03p14980 Brassica napus HOM05D005586 ORTHO05D007044 1.3e-235 820.1 646 67.3
C09p49310 Brassica napus HOM05D005586 ORTHO05D007044 1.3e-235 820.1 647 67.7
BolC3t13940H Brassica oleracea HOM05D005586 ORTHO05D007044 1.3e-235 820.1 645 67.4
BraA10t43568Z Brassica rapa HOM05D005586 ORTHO05D007044 1.3e-235 820.1 641 68.5
Sp6g19170 Schrenkiella parvula HOM05D005586 ORTHO05D007044 2.2e-235 819.3 644 66.9
BcaC01g06487 Brassica carinata HOM05D005586 ORTHO05D007044 4.8e-235 818.1 643 67.7
BcaC04g19966 Brassica carinata HOM05D005586 ORTHO05D007044 4.8e-235 818.1 649 67.3
Carub.0008s1797 Capsella rubella HOM05D005586 ORTHO05D007044 4.8e-235 818.1 648 66.8
AT5G57460 Arabidopsis thaliana HOM05D005586 ORTHO05D007044 6.3e-235 817.8 650 66.6
CDE04G2484 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 6.3e-235 817.8 641 67.2
A03p12820 Brassica napus HOM05D005586 ORTHO05D007044 8.2e-235 817.4 644 67.2
A10p14890 Brassica napus HOM05D005586 ORTHO05D007044 8.2e-235 817.4 644 67.5
BraA03t10590Z Brassica rapa HOM05D005586 ORTHO05D007044 1.4e-234 816.6 643 67.2
TPR.G5407 Trifolium pratense HOM05D005586 ORTHO05D007044 1.7e-232 809.7 568 72.9
Thhalv10015707m.g Eutrema salsugineum HOM05D005586 ORTHO05D007044 2.9e-232 808.9 645 65.7
Aa31LG3G220 Aethionema arabicum HOM05D005586 ORTHO05D007044 6.5e-232 807.7 641 67.4
Gohir.D08G094100 Gossypium hirsutum HOM05D005586 ORTHO05D007044 7.2e-231 804.3 643 68.0
AUR62021301 Chenopodium quinoa HOM05D005586 ORTHO05D007044 5.7e-228 794.7 636 66.8
BolC9t57782H Brassica oleracea HOM05D005586 ORTHO05D007044 1.7e-227 793.1 647 66.3
PSO541G5977 Papaver somniferum HOM05D005586 ORTHO05D007044 6.3e-227 791.2 640 66.6
AUR62033219 Chenopodium quinoa HOM05D005586 ORTHO05D007044 1.1e-226 790.4 636 66.4
MBI14_g17367_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 4.5e-225 785.0 632 66.3
SHI41749 Sapria himalayana HOM05D005586 ORTHO05D007044 5.9e-225 784.6 645 65.6
Hma1.2p1_3184F.1_g333760 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 6.6e-216 754.6 628 67.2
ATR0618G120 Amborella trichopoda HOM05D005586 ORTHO05D007044 4.2e-215 751.9 632 62.3
SalBow6G0691 Salvia bowleyana HOM05D005586 ORTHO05D007044 7.2e-215 751.1 632 64.4
MD13G1254300 Malus domestica HOM05D005586 ORTHO05D007044 1.6e-214 750.0 653 64.0
SalBow1G5715 Salvia bowleyana HOM05D005586 ORTHO05D007044 9.8e-212 740.7 632 64.7
SEGI_38070 Sequoiadendron giganteum HOM05D005586 ORTHO05D007044 7.5e-204 714.5 625 60.3
Zm00001eb414690 Zea mays HOM05D005586 ORTHO05D007044 7.3e-199 698.0 635 60.6
MBI18_g04576_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 3.1e-197 692.6 632 61.4
Os08g0243900 Oryza sativa ssp. japonica HOM05D005586 ORTHO05D007044 1.1e-194 684.1 638 59.2
CDE02G2425 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 1.5e-175 620.5 634 56.0
BcaC01g06491 Brassica carinata HOM05D005586 ORTHO05D007044 1.7e-171 607.1 614 56.4
MBI16_g35931_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 2.5e-167 593.2 543 61.0
Mapoly0111s0055 Marchantia polymorpha HOM05D005586 ORTHO05D007044 8.7e-152 541.6 651 49.3
BcaC01g06494 Brassica carinata HOM05D005586 ORTHO05D007044 1.7e-147 527.3 614 51.8
Pp3c25_4850 Physcomitrium patens HOM05D005586 ORTHO05D007044 2.5e-143 513.5 647 47.6
AagrBONN_evm.TU.Sc2ySwM_368.670 Anthoceros agrestis HOM05D005586 ORTHO05D007044 3.4e-132 476.5 664 44.4
COL.COLO4_04392 Corchorus olitorius HOM05D005586 ORTHO05D007044 3.5e-116 423.3 356 63.8
unitig_899.g14852 Utricularia gibba HOM05D005586 ORTHO05D007044 1.5e-111 407.9 335 67.5
SMO228G0090 Selaginella moellendorffii HOM05D005586 ORTHO05D007044 2.3e-96 357.5 384 51.8
unitig_899.g14851 Utricularia gibba HOM05D005586 ORTHO05D007044 1.1e-90 338.6 236 69.9
HPP92_000781 Vanilla planifolia HOM05D005586 ORTHO05D007044 5.2e-72 276.6 296 54.4
QL11p053068 Quercus lobata HOM05D005586 ORTHO05D007044 1.5e-42 178.7 118 80.5
CBR_g26159 Chara braunii HOM05D005586 ORTHO05D000002 4.3e-42 177.2 551 30.5
MD16G1258000 Malus domestica HOM05D005586 ORTHO05D007044 3.4e-39 167.5 118 70.3
MD16G1258100 Malus domestica HOM05D005586 ORTHO05D007044 7.2e-21 106.7 115 51.3
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 9.7e-18 96.3 88 59.1
CBR_g26157 Chara braunii HOM05D005586 ORTHO05D007044 3.2e-13 81.3 99 47.5
MBI16_g35933_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009834 2.0e-10 72.0 44 77.3
MBI16_g35934_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 7.4e-10 70.1 51 60.8
SalBow4G0612 Salvia bowleyana HOM05D005586 ORTHO05D360416 1.3e-06 59.3 46 56.5


User provided reference genes

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