Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0146000 Rhododendron simsii HOM05D003987 ORTHO05D004532 8.6e-167 590.5 356 100.0
vmacro08611 Vaccinium macrocarpon HOM05D003987 ORTHO05D004532 7.2e-81 305.1 372 54.6
CSS0027188 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 7.1e-52 208.8 378 43.4
Actinidia05340 Actinidia chinensis HOM05D003987 ORTHO05D004532 8.9e-47 191.8 415 39.8
CSS0016809 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 2.4e-44 183.7 301 44.9
Dinv37095 Davidia involucrata HOM05D003987 ORTHO05D004532 7.1e-44 182.2 293 48.1
Lj2A83T77 Lonicera japonica HOM05D003987 ORTHO05D004532 3.0e-42 176.8 383 38.4
CSS0029662 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 3.9e-34 149.8 295 44.1
Peaxi162Scf01302g00045 Petunia axillaris HOM05D003987 ORTHO05D004532 2.1e-32 144.1 298 39.9
Duzib093G0208 Durio zibethinus HOM05D003987 ORTHO05D004532 3.1e-31 140.2 308 37.0
Duzib093G1974 Durio zibethinus HOM05D003987 ORTHO05D004532 1.5e-30 137.9 308 36.4
SalBow3G0011 Salvia bowleyana HOM05D003987 ORTHO05D004532 2.0e-30 137.5 298 37.2
COL.COLO4_14650 Corchorus olitorius HOM05D003987 ORTHO05D004532 3.4e-30 136.7 272 40.1
Hma1.2p1_0244F.1_g101070 Hydrangea macrophylla HOM05D003987 ORTHO05D004532 1.7e-29 134.4 276 42.8
Thecc.05G024900 Theobroma cacao HOM05D003987 ORTHO05D004532 8.4e-29 132.1 309 35.9
Dinv35526 Davidia involucrata HOM05D003987 ORTHO05D004532 7.1e-28 129.0 298 39.6
GSVIVG01034033001 Vitis vinifera HOM05D003987 ORTHO05D004532 7.1e-28 129.0 283 39.9
Actinidia01122 Actinidia chinensis HOM05D003987 ORTHO05D004532 1.2e-27 128.3 249 42.2
Prupe.6G268000 Prunus persica HOM05D003987 ORTHO05D004532 2.1e-27 127.5 263 37.6
QL07p027561 Quercus lobata HOM05D003987 ORTHO05D004532 2.1e-27 127.5 293 39.2
PGSC0003DMG400020336 Solanum tuberosum HOM05D003987 ORTHO05D004532 2.1e-27 127.5 300 38.3
Duzib128G2001 Durio zibethinus HOM05D003987 ORTHO05D004532 1.0e-26 125.2 296 35.8
Gorai.012G110200 Gossypium raimondii HOM05D003987 ORTHO05D004532 3.3e-25 120.2 298 33.6
Solyc09g011820.4 Solanum lycopersicum HOM05D003987 ORTHO05D004532 4.3e-25 119.8 304 37.2
Gohir.D04G127200 Gossypium hirsutum HOM05D003987 ORTHO05D004532 7.4e-25 119.0 298 33.6
Nitab4.5_0000008g0400 Nicotiana tabacum HOM05D003987 ORTHO05D004532 9.6e-25 118.6 268 37.7
Sopen09g006640 Solanum pennellii HOM05D003987 ORTHO05D004532 1.3e-24 118.2 303 37.3
ClCG10G021770 Citrullus lanatus HOM05D003987 ORTHO05D004532 6.2e-24 115.9 294 34.7
Cfa017278 Carpinus fangiana HOM05D003987 ORTHO05D004532 8.1e-24 115.5 292 38.4
Ciclev10011513m.g Citrus clementina HOM05D003987 ORTHO05D004532 4.0e-23 113.2 296 33.8
Haze_20924 Corylus avellana HOM05D003987 ORTHO05D004532 4.0e-23 113.2 288 37.8
Gohir.A04G086900 Gossypium hirsutum HOM05D003987 ORTHO05D004532 4.0e-23 113.2 298 32.9
MD12G1157700 Malus domestica HOM05D003987 ORTHO05D004532 5.3e-23 112.8 275 35.3
MD04G1143500 Malus domestica HOM05D003987 ORTHO05D004532 6.9e-23 112.5 273 37.4
CsaV3_3G034330 Cucumis sativus L. HOM05D003987 ORTHO05D004532 2.0e-22 110.9 292 34.2
Cc06_g01840 Coffea canephora HOM05D003987 ORTHO05D004532 2.6e-22 110.5 300 36.0
MELO3C009204.2 Cucumis melo HOM05D003987 ORTHO05D004532 2.6e-22 110.5 267 36.0
Sabra06G0072400 Salix brachista HOM05D003987 ORTHO05D004532 2.6e-22 110.5 295 34.2
Gohir.A01G224300 Gossypium hirsutum HOM05D003987 ORTHO05D004532 3.4e-22 110.2 304 32.6
Sed0006107 Sechium edule HOM05D003987 ORTHO05D004532 3.4e-22 110.2 292 34.2
Nitab4.5_0000119g0280 Nicotiana tabacum HOM05D003987 ORTHO05D004532 7.6e-22 109.0 294 34.7
Gohir.D01G213600 Gossypium hirsutum HOM05D003987 ORTHO05D004532 1.3e-21 108.2 304 32.9
Potri.016G109100 Populus trichocarpa HOM05D003987 ORTHO05D004532 1.7e-21 107.8 297 34.0
CAN.G351.10 Capsicum annuum HOM05D003987 ORTHO05D004532 2.9e-21 107.1 234 37.2
Gorai.002G259700 Gossypium raimondii HOM05D003987 ORTHO05D004532 6.4e-21 105.9 304 32.6
Potri.006G094600 Populus trichocarpa HOM05D003987 ORTHO05D004532 6.4e-21 105.9 296 32.8
EL10Ac8g18936 Beta vulgaris HOM05D003987 ORTHO05D004532 1.1e-20 105.1 243 38.3
PGSC0003DMG400019132 Solanum tuberosum HOM05D003987 ORTHO05D004532 1.1e-20 105.1 290 34.8
Migut.J00243 Erythranthe guttata HOM05D003987 ORTHO05D004532 1.9e-20 104.4 268 36.9
FvH4_6g12360 Fragaria vesca HOM05D003987 ORTHO05D004532 1.9e-20 104.4 311 33.1
Psat7g242560 Pisum sativum HOM05D003987 ORTHO05D004532 1.9e-20 104.4 273 37.0
Atru.chr8.2120 Acer truncatum HOM05D003987 ORTHO05D004532 4.2e-20 103.2 289 34.3
Oeu018344.1 Olea europaea HOM05D003987 ORTHO05D004532 1.2e-19 101.7 228 39.5
Lalb_Chr01g0022851 Lupinus albus HOM05D003987 ORTHO05D004532 1.6e-19 101.3 281 35.6
Nitab4.5_0017865g0010 Nicotiana tabacum HOM05D003987 ORTHO05D004532 2.1e-19 100.9 291 32.6
AUR62028348 Chenopodium quinoa HOM05D003987 ORTHO05D004532 2.7e-19 100.5 270 34.8
Oeu009906.1 Olea europaea HOM05D003987 ORTHO05D004532 3.5e-19 100.1 193 41.5
Medtr4g019040 Medicago truncatula HOM05D003987 ORTHO05D004532 6.0e-19 99.4 268 35.1
VMungo1383G2510 Vigna mungo HOM05D003987 ORTHO05D004532 6.0e-19 99.4 216 38.9
Lj3g0003026 Lotus japonicus HOM05D003987 ORTHO05D004532 1.0e-18 98.6 276 36.2
Hund08928 Selenicereus undatus HOM05D003987 ORTHO05D004532 1.0e-18 98.6 225 38.7
MSTRG.19041 Avicennia marina HOM05D003987 ORTHO05D004532 1.8e-18 97.8 196 40.3
Peaxi162Scf00014g00921 Petunia axillaris HOM05D003987 ORTHO05D004532 3.9e-18 96.7 261 33.0
Sopen10g036150 Solanum pennellii HOM05D003987 ORTHO05D004532 6.7e-18 95.9 310 32.9
FAN02G3471 Fragaria x ananassa HOM05D003987 ORTHO05D004532 1.5e-17 94.7 311 32.2
Glyma.18G193700 Glycine max HOM05D003987 ORTHO05D004532 1.5e-17 94.7 212 36.8
AUR62025345 Chenopodium quinoa HOM05D003987 ORTHO05D004532 1.9e-17 94.4 232 36.6
Manes.09G100200 Manihot esculenta HOM05D003987 ORTHO05D004532 1.9e-17 94.4 229 37.6
FAN09G0914 Fragaria x ananassa HOM05D003987 ORTHO05D004532 2.5e-17 94.0 278 32.7
RcHm_v2.0_Chr3g0464181 Rosa chinensis HOM05D003987 ORTHO05D004532 2.5e-17 94.0 309 32.0
Solyc10g086740.3 Solanum lycopersicum HOM05D003987 ORTHO05D004532 3.3e-17 93.6 309 32.4
Sc22g0004580 Simmondsia chinensis HOM05D003987 ORTHO05D004532 9.6e-17 92.0 232 37.5
Glyma.07G142800 Glycine max HOM05D003987 ORTHO05D004532 1.3e-16 91.7 216 35.2
Lj1g0003107 Lotus japonicus HOM05D003987 ORTHO05D004532 1.3e-16 91.7 216 34.7
TPR.G8182 Trifolium pratense HOM05D003987 ORTHO05D004532 3.7e-16 90.1 271 35.1
Phvul.008G111900 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 6.2e-16 89.4 208 37.5
Ca_20115_v3 Cicer arietinum L. HOM05D003987 ORTHO05D004532 8.1e-16 89.0 205 40.5
DCAR_028789 Daucus carota HOM05D003987 ORTHO05D004532 2.4e-15 87.4 301 33.2
PSO384G1037 Papaver somniferum HOM05D003987 ORTHO05D004532 2.4e-15 87.4 252 32.9
CANSAT78G1629 Cannabis sativa HOM05D003987 ORTHO05D004532 3.1e-15 87.0 297 33.3
arahy.Tifrunner.gnm1.ann1.B3S732 Arachis hypogaea HOM05D003987 ORTHO05D004532 4.0e-15 86.7 218 35.3
PSO339G5295 Papaver somniferum HOM05D003987 ORTHO05D004532 4.0e-15 86.7 259 33.2
Migut.L01985 Erythranthe guttata HOM05D003987 ORTHO05D004532 5.3e-15 86.3 200 38.5
arahy.Tifrunner.gnm1.ann1.S0ZXK0 Arachis hypogaea HOM05D003987 ORTHO05D004532 6.9e-15 85.9 218 34.9
PGR031G1271 Punica granatum HOM05D003987 ORTHO05D004532 9.0e-15 85.5 276 33.0
Nn2g13566 Nelumbo nucifera HOM05D003987 ORTHO05D004532 1.5e-14 84.7 303 32.0
TWI77G0200 Tripterygium wilfordii HOM05D003987 ORTHO05D004532 2.0e-14 84.3 273 33.3
TAR633G1447 Trochodendron aralioides HOM05D003987 ORTHO05D004532 3.4e-14 83.6 296 32.4
Thhalv10016588m.g Eutrema salsugineum HOM05D003987 ORTHO05D004532 4.9e-13 79.7 244 32.4
Lalb_Chr19g0124881 Lupinus albus HOM05D003987 ORTHO05D004532 6.5e-13 79.3 215 34.4
Sed0025444 Sechium edule HOM05D003987 ORTHO05D004532 6.5e-13 79.3 216 34.3
Lsat_1_v5_gn_9_33201 Lactuca sativa HOM05D003987 ORTHO05D004532 1.1e-12 78.6 298 33.6
Dinv04008 Davidia involucrata HOM05D003987 ORTHO05D004532 1.9e-12 77.8 122 43.4
MBI14_g28607_MAGBIO Magnolia biondii HOM05D003987 ORTHO05D004532 2.5e-12 77.4 273 30.8
Sp4g20270 Schrenkiella parvula HOM05D003987 ORTHO05D004532 2.5e-12 77.4 280 30.7
AT2G37960 Arabidopsis thaliana HOM05D003987 ORTHO05D004532 5.5e-12 76.3 272 29.0
HanXRQChr01g0001271 Helianthus annuus HOM05D003987 ORTHO05D004532 5.5e-12 76.3 294 34.0
SGA_v2.0_scaffold75G24988 Striga asiatica HOM05D003987 ORTHO05D004532 5.5e-12 76.3 276 33.3
Cpa.g.sc56.87 Carica papaya HOM05D003987 ORTHO05D004532 7.1e-12 75.9 275 33.5
Carub.0004s1992 Capsella rubella HOM05D003987 ORTHO05D004532 2.1e-11 74.3 290 27.9
AL4G34930 Arabidopsis lyrata HOM05D003987 ORTHO05D004532 4.6e-11 73.2 273 29.7
FAN05G0535 Fragaria x ananassa HOM05D003987 ORTHO05D004532 2.3e-10 70.9 246 29.3
Nitab4.5_0002152g0110 Nicotiana tabacum HOM05D003987 ORTHO05D004532 3.0e-10 70.5 198 34.3
unitig_749.g14175 Utricularia gibba HOM05D003987 ORTHO05D004532 1.9e-09 67.8 187 34.8
TAR623G1001 Trochodendron aralioides HOM05D003987 ORTHO05D004532 4.3e-09 66.6 200 31.0
DCAR_012161 Daucus carota HOM05D003987 ORTHO05D004532 5.7e-09 66.2 311 28.9
AL5G35070 Arabidopsis lyrata HOM05D003987 ORTHO05D004532 9.6e-09 65.5 270 29.3
FAN14G4402 Fragaria x ananassa HOM05D003987 ORTHO05D004532 5.3e-07 59.7 143 35.0
Carub.0005s2065 Capsella rubella HOM05D003987 ORTHO05D004532 5.9e-06 56.2 235 27.7
Sabra16G0105800 Salix brachista HOM05D003987 ORTHO05D004532 5.9e-06 56.2 114 35.1


User provided reference genes

Program Settings