Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 3.7e-197 691.4 367 100.0
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 2.4e-127 459.5 370 67.0
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 3.7e-112 409.1 334 66.2
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 7.4e-105 384.8 366 58.7
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 4.1e-103 379.0 318 66.0
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 5.9e-102 375.2 372 56.7
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.1e-100 370.9 363 57.6
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.6e-97 359.8 363 54.8
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 9.7e-97 357.8 363 54.8
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.7e-96 357.1 363 54.8
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 2.2e-96 356.7 347 56.5
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 6.3e-96 355.1 344 57.3
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 1.4e-95 354.0 325 60.9
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 1.2e-94 350.9 272 71.3
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.4e-94 349.4 362 54.1
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.8e-93 345.9 372 53.5
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 1.4e-92 344.0 359 55.4
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 6.1e-91 338.6 363 52.3
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 3.9e-90 335.9 369 52.3
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 1.3e-88 330.9 362 53.9
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 1.7e-88 330.5 377 52.5
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 1.7e-88 330.5 354 53.1
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 2.4e-87 326.6 367 50.4
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 4.1e-87 325.9 358 52.5
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 5.3e-87 325.5 365 52.3
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 3.5e-86 322.8 362 52.2
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 4.5e-86 322.4 364 50.5
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 5.0e-85 318.9 364 51.4
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 1.5e-84 317.4 373 51.7
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 7.2e-84 315.1 364 49.7
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 8.0e-83 311.6 374 50.0
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 8.8e-82 308.1 368 49.5
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 4.4e-81 305.8 322 50.6
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.3e-80 304.3 322 50.3
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.7e-80 303.9 322 50.3
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.7e-80 303.9 370 49.2
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 4.8e-80 302.4 367 50.4
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 4.8e-80 302.4 374 49.5
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 4.8e-80 302.4 367 49.3
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 6.3e-80 302.0 363 49.9
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 8.2e-80 301.6 374 46.5
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 5.9e-78 295.4 381 48.8
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 5.9e-78 295.4 380 47.9
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 7.7e-78 295.0 367 49.0
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 1.3e-77 294.3 367 49.0
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 5.0e-77 292.4 365 48.5
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 1.1e-76 291.2 367 49.3
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 2.1e-75 287.0 367 48.0
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.4e-74 284.3 276 57.6
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 2.6e-73 280.0 359 45.7
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 4.4e-73 279.3 328 52.4
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 9.8e-73 278.1 349 47.6
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 9.5e-68 261.5 368 45.9
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 9.5e-68 261.5 321 49.5
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 9.5e-68 261.5 357 46.5
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 2.1e-67 260.4 359 44.0
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 3.6e-67 259.6 352 45.7
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 4.7e-67 259.2 340 47.9
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 9.8e-65 251.5 272 51.5
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.3e-64 251.1 272 51.5
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.7e-64 250.8 362 45.9
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 4.9e-64 249.2 352 43.8
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 3.8e-61 239.6 324 45.4
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 6.6e-61 238.8 336 43.8
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.5e-57 227.6 337 41.2
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 3.4e-57 226.5 333 43.2
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 7.5e-57 225.3 335 42.1
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 9.8e-57 224.9 305 46.2
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 2.2e-56 223.8 304 46.1
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 3.2e-55 219.9 304 44.4
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 4.1e-55 219.5 319 42.3
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 7.0e-55 218.8 207 58.5
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 2.7e-54 216.9 360 41.4
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.5e-52 210.3 362 41.4
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.5e-52 210.3 362 41.4
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 8.0e-51 205.3 215 53.0
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 1.5e-49 201.1 350 42.0
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 8.3e-48 195.3 211 52.1
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 7.0e-47 192.2 280 44.6
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 1.6e-46 191.0 287 42.5
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 8.6e-45 185.3 351 37.6
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 2.5e-44 183.7 368 36.1
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 1.4e-42 177.9 386 35.0
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 2.6e-41 173.7 295 42.4
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 3.4e-41 173.3 351 38.5
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.3e-40 171.4 351 38.2
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 8.3e-40 168.7 272 39.3
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 2.3e-37 160.6 140 56.4
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 2.3e-37 160.6 361 34.9
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 2.8e-35 153.7 370 34.9
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 1.1e-34 151.8 181 49.2
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 3.4e-33 146.7 360 33.3
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 7.6e-33 145.6 356 34.0
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 1.9e-31 141.0 360 32.5
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 1.2e-30 138.3 362 32.3
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 1.6e-30 137.9 357 32.8
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 4.6e-30 136.3 361 31.6
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 7.8e-30 135.6 363 33.1
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 7.8e-30 135.6 363 33.1
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 1.0e-29 135.2 357 32.8
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 1.7e-29 134.4 363 32.8
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 3.4e-25 120.2 289 34.9
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 6.4e-24 115.9 307 30.3
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 4.2e-23 113.2 239 36.0
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 6.6e-21 105.9 269 31.2
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.5e-20 104.8 332 31.3
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 2.5e-20 104.0 336 30.4
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 4.3e-20 103.2 289 32.2
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 2.8e-19 100.5 276 30.8
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 6.2e-19 99.4 303 31.0
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 9.9e-17 92.0 343 26.8
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.4e-15 88.2 123 42.3
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.4e-15 88.2 123 42.3
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 3.2e-15 87.0 140 40.7
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 1.6e-14 84.7 82 52.4
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 1.3e-08 65.1 65 52.3


User provided reference genes

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