Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 2.9e-92 342.4 253 100.0
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 3.3e-64 249.2 303 73.6
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 4.8e-63 245.4 251 81.3
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 4.2e-59 232.3 251 79.3
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 5.7e-56 221.9 252 79.0
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 2.7e-45 186.4 249 73.1
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 6.8e-41 171.8 252 69.4
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 1.5e-40 170.6 250 69.2
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 3.4e-40 169.5 237 71.3
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 4.4e-40 169.1 253 69.2
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.2e-39 166.8 254 69.3
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 4.9e-39 165.6 237 69.6
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 1.1e-38 164.5 260 56.5
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 1.8e-38 163.7 240 69.6
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 9.2e-38 161.4 238 69.3
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 1.2e-37 161.0 252 67.1
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 1.6e-37 160.6 251 68.9
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 1.6e-37 160.6 239 70.7
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 2.0e-37 160.2 251 69.7
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 2.7e-37 159.8 251 68.5
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 3.5e-37 159.5 252 67.9
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.3e-36 157.5 252 66.3
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 1.7e-36 157.1 248 69.8
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 6.6e-36 155.2 263 66.5
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 5.6e-35 152.1 254 66.5
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 7.3e-35 151.8 271 64.6
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 1.2e-34 151.0 240 67.1
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 1.6e-34 150.6 240 67.1
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 2.1e-34 150.2 253 66.8
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 2.8e-34 149.8 260 66.2
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 2.8e-34 149.8 249 65.9
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 3.6e-34 149.4 245 68.2
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 4.7e-34 149.1 244 68.0
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 6.2e-34 148.7 238 69.7
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 1.1e-33 147.9 252 65.9
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.4e-33 147.5 238 69.3
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.4e-33 147.5 244 67.6
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 2.3e-33 146.7 239 67.8
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.2e-33 145.6 238 68.9
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 6.8e-33 145.2 256 65.2
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 8.9e-33 144.8 248 66.1
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 1.2e-32 144.4 245 64.9
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 2.0e-32 143.7 252 65.5
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 3.4e-32 142.9 240 65.0
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 3.4e-32 142.9 240 68.8
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 5.8e-32 142.1 244 64.8
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 5.8e-32 142.1 254 62.6
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 9.8e-32 141.4 255 65.5
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 2.2e-31 140.2 244 67.2
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 4.9e-31 139.0 244 66.0
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 6.4e-31 138.7 243 66.7
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.4e-30 137.5 244 66.4
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 7.0e-30 135.2 252 64.7
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 1.2e-29 134.4 244 64.8
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 1.2e-29 134.4 244 64.8
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 1.6e-29 134.0 238 67.2
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 2.0e-29 133.7 250 64.0
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 2.0e-29 133.7 250 64.0
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 6.0e-29 132.1 245 62.9
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 1.7e-28 130.6 249 53.0
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 2.3e-28 130.2 250 62.4
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 3.9e-28 129.4 263 60.5
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 6.6e-28 128.6 165 83.0
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 1.5e-27 127.5 239 63.6
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 1.5e-27 127.5 71 84.5
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 1.9e-27 127.1 264 59.5
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 2.5e-27 126.7 250 64.0
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 2.5e-27 126.7 254 61.8
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 3.3e-27 126.3 78 75.6
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 4.3e-27 125.9 268 59.3
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 7.3e-27 125.2 244 63.1
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 1.2e-26 124.4 239 62.8
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 1.6e-26 124.0 74 81.1
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 1.6e-26 124.0 266 60.2
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 4.7e-26 122.5 69 85.5
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 1.4e-25 120.9 241 60.2
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.4e-25 120.9 244 61.1
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 1.8e-25 120.6 377 46.2
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 2.3e-25 120.2 68 85.3
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 2.3e-25 120.2 216 67.6
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 3.1e-25 119.8 242 64.0
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 5.2e-25 119.0 181 74.6
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 6.8e-25 118.6 256 58.6
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 6.8e-25 118.6 244 61.5
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 2.0e-24 117.1 241 61.8
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 7.5e-24 115.2 204 70.6
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 9.9e-24 114.8 69 79.7
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 9.9e-24 114.8 243 60.5
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.9e-23 113.2 78 70.5
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 1.1e-22 111.3 210 65.2
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 1.4e-22 110.9 258 57.4
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 1.4e-22 110.9 258 57.4
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 1.3e-20 104.4 105 57.1
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 1.3e-20 104.4 252 58.3
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 3.3e-19 99.8 238 60.9
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 7.3e-19 98.6 204 67.2
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 2.8e-18 96.7 69 71.0
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.8e-18 96.7 210 66.2
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 2.8e-18 96.7 291 52.2
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 3.6e-18 96.3 81 56.8
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 6.2e-18 95.5 241 57.7
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 1.4e-17 94.4 242 55.8
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 2.4e-17 93.6 69 69.6
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 5.2e-17 92.4 68 63.2
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.6e-16 90.1 204 34.3
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.2e-15 87.0 195 50.3
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 1.4e-14 84.3 267 53.9
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.1e-13 80.5 211 59.2
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 2.1e-13 80.5 263 54.8
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 1.0e-12 78.2 199 62.8
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 3.9e-12 76.3 208 60.6
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 8.7e-12 75.1 181 44.8
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 6.2e-10 68.9 265 51.7
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 1.1e-09 68.2 51 54.9
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.4e-09 67.8 34 88.2
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 1.2e-08 64.7 45 62.2
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 7.6e-08 62.0 36 80.6
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 2.9e-07 60.1 36 77.8


User provided reference genes

Program Settings