Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 0.0e+00 1626.7 867 100.0
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 2.0e-265 919.5 993 58.1
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.6e-217 759.6 886 53.2
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 1.1e-180 637.9 891 47.9
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 4.4e-180 636.0 890 48.5
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 9.2e-130 468.8 893 38.0
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 7.8e-129 465.7 902 39.1
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 1.4e-117 428.3 656 41.9
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 2.6e-116 424.1 916 37.7
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 4.4e-116 423.3 883 37.3
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 1.4e-114 418.3 904 35.4
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 6.9e-109 399.4 898 34.9
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 1.2e-108 398.7 593 42.5
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 4.4e-108 396.7 883 36.4
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 2.2e-107 394.4 894 35.6
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 3.5e-105 387.1 900 34.6
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 6.6e-104 382.9 646 39.6
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 3.6e-102 377.1 615 38.7
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 6.2e-102 376.3 899 33.9
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 1.8e-101 374.8 646 38.9
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 8.4e-99 365.9 897 34.2
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 7.1e-98 362.8 335 61.2
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.1e-97 361.3 865 32.6
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 3.5e-97 360.5 651 37.8
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 7.9e-97 359.4 865 33.3
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 1.3e-96 358.6 900 33.8
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 1.8e-96 358.2 874 37.0
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.9e-95 354.8 865 32.7
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 7.4e-95 352.8 849 34.6
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 1.6e-94 351.7 642 39.9
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 4.8e-94 350.1 898 32.7
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 8.1e-94 349.4 607 42.2
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 1.8e-93 348.2 902 33.8
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 2.4e-93 347.8 885 33.4
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 2.6e-92 344.4 865 32.4
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 2.6e-92 344.4 658 38.0
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 2.6e-92 344.4 885 32.4
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 4.5e-92 343.6 896 32.0
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 1.0e-91 342.4 625 39.2
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 1.0e-91 342.4 897 32.7
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 2.2e-91 341.3 692 36.8
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 2.9e-91 340.9 888 31.8
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 6.5e-91 339.7 887 32.9
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 1.4e-90 338.6 902 34.7
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 4.2e-90 337.0 925 33.9
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 1.5e-87 328.6 657 37.1
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 6.3e-86 323.2 639 37.7
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 3.1e-85 320.9 632 37.5
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 3.1e-85 320.9 632 37.5
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 5.3e-85 320.1 917 32.6
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 1.0e-83 315.8 653 34.8
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 3.8e-83 313.9 639 36.5
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 1.4e-82 312.0 927 31.9
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 1.1e-79 302.4 651 35.8
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 1.1e-79 302.4 664 35.2
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 3.3e-79 300.8 901 30.4
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 4.3e-79 300.4 589 36.8
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 1.3e-78 298.9 701 33.1
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 2.8e-78 297.7 645 33.6
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 4.8e-78 297.0 612 34.8
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 6.3e-78 296.6 361 49.6
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 6.3e-78 296.6 878 31.9
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 1.4e-77 295.4 647 33.2
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 1.4e-77 295.4 925 32.0
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 2.4e-77 294.7 647 34.9
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 2.4e-77 294.7 647 34.9
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 2.4e-77 294.7 647 34.9
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 5.3e-77 293.5 593 35.9
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 6.9e-77 293.1 654 34.3
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 6.9e-77 293.1 654 34.6
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 1.5e-76 292.0 279 57.3
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 3.4e-76 290.8 655 34.2
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 5.9e-76 290.0 667 34.6
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 1.0e-75 289.3 653 34.3
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 1.1e-74 285.8 927 30.1
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.4e-74 285.4 488 40.2
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 9.4e-74 282.7 653 33.8
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 9.7e-71 272.7 593 32.4
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 4.1e-69 267.3 274 53.6
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 1.5e-68 265.4 627 32.4
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 3.4e-68 264.2 666 33.2
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 2.5e-66 258.1 607 32.3
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 6.1e-65 253.4 589 32.1
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 3.0e-64 251.1 706 29.5
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 9.1e-61 239.6 685 30.5
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 4.7e-57 227.3 604 32.1
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 2.3e-56 224.9 364 40.9
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 6.7e-56 223.4 270 51.1
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 2.0e-52 211.8 226 52.7
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 2.7e-52 211.5 613 30.2
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 1.7e-43 182.2 187 57.2
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 2.3e-40 171.8 648 27.0
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 9.2e-37 159.8 152 57.2
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 5.9e-36 157.1 207 44.9
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 6.6e-35 153.7 436 32.1
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 8.9e-32 143.3 151 55.0
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 3.7e-30 137.9 357 33.3
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.8e-29 135.6 480 29.8
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 1.6e-28 132.5 619 23.7
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 4.6e-28 131.0 155 50.3
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 5.0e-27 127.5 496 29.0
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.8e-25 121.7 133 51.9
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 3.2e-21 108.2 165 46.1
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 5.0e-19 100.9 390 27.9
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.5e-18 98.6 90 57.8
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 6.0e-12 77.4 155 31.6
Oeu063929.1 Olea europaea HOM05D006140 ORTHO05D007834 2.5e-10 72.0 55 65.5
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 4.3e-10 71.2 489 22.7
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.8e-09 68.6 114 43.0
CBR_g24386 Chara braunii HOM05D006140 ORTHO05D007834 8.1e-09 67.0 244 29.1
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 1.4e-08 66.2 185 28.1
AagrBONN_evm.TU.Sc2ySwM_344.4141 Anthoceros agrestis HOM05D006140 ORTHO05D007834 1.7e-06 59.3 209 26.3
SMO367G0412 Selaginella moellendorffii HOM05D006140 ORTHO05D007834 1.7e-06 59.3 284 23.9
Cpa.g.sc16.12 Carica papaya HOM05D006140 ORTHO05D007834 3.8e-06 58.2 178 30.3
Medtr5g019630 Medicago truncatula HOM05D006140 ORTHO05D007834 6.4e-06 57.4 84 46.4
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 8.4e-06 57.0 376 22.3


User provided reference genes

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