Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 9.5e-78 293.5 156 100.0
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 9.9e-59 230.3 156 75.0
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 3.2e-49 198.7 157 70.1
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 4.2e-49 198.4 156 63.5
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 8.7e-47 190.7 156 61.5
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 1.5e-46 189.9 157 61.8
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 6.2e-45 184.5 159 64.8
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 6.2e-45 184.5 157 60.5
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 6.2e-45 184.5 157 60.5
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 2.2e-42 176.0 164 60.4
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 2.2e-42 176.0 156 60.3
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 1.1e-41 173.7 164 60.4
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.2e-40 170.2 158 53.8
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 3.5e-40 168.7 161 55.3
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 3.5e-40 168.7 167 52.1
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 4.6e-40 168.3 158 53.2
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 7.9e-40 167.5 160 53.8
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 7.9e-40 167.5 172 52.9
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 1.3e-39 166.8 160 52.5
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 1.8e-39 166.4 163 53.4
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 2.3e-39 166.0 160 52.5
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 6.7e-39 164.5 169 58.0
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 1.1e-38 163.7 166 51.2
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 2.5e-38 162.5 159 50.3
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 4.3e-38 161.8 159 50.3
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 9.7e-38 160.6 158 51.9
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 1.6e-37 159.8 158 50.0
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 1.6e-37 159.8 158 50.6
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 1.6e-37 159.8 158 53.2
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 1.6e-37 159.8 159 49.7
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 2.2e-37 159.5 158 50.6
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 2.2e-37 159.5 164 47.6
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.8e-37 159.1 157 49.0
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 4.8e-37 158.3 163 52.1
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 8.2e-37 157.5 156 53.2
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 8.2e-37 157.5 164 48.8
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 1.1e-36 157.1 197 46.7
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 1.4e-36 156.8 160 52.5
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 1.8e-36 156.4 165 49.1
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 2.4e-36 156.0 165 54.5
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 4.1e-36 155.2 156 51.9
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 5.3e-36 154.8 163 51.5
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 5.3e-36 154.8 159 50.9
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 6.9e-36 154.5 158 50.6
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 6.9e-36 154.5 160 53.1
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 6.9e-36 154.5 164 46.3
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 1.2e-35 153.7 164 50.0
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.2e-35 153.7 160 51.9
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.2e-35 153.7 157 51.6
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 1.5e-35 153.3 156 51.9
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 2.6e-35 152.5 156 51.3
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 3.4e-35 152.1 157 50.3
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 3.4e-35 152.1 156 51.9
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 5.9e-35 151.4 164 45.1
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 7.7e-35 151.0 156 52.6
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 7.7e-35 151.0 156 52.6
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 1.0e-34 150.6 163 48.5
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 1.0e-34 150.6 160 52.5
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 1.0e-34 150.6 157 49.0
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 1.7e-34 149.8 157 47.8
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 2.2e-34 149.4 159 49.1
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 2.9e-34 149.1 159 48.4
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.9e-34 149.1 157 56.7
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 3.8e-34 148.7 157 49.0
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 5.0e-34 148.3 160 48.8
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 5.0e-34 148.3 159 50.3
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 8.5e-34 147.5 160 53.1
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 8.5e-34 147.5 160 53.1
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 1.4e-33 146.7 146 52.7
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 4.2e-33 145.2 164 47.6
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 4.2e-33 145.2 156 49.4
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 1.2e-32 143.7 162 53.1
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 2.1e-32 142.9 162 48.1
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 2.7e-32 142.5 166 50.6
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 2.3e-31 139.4 156 46.8
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 3.9e-31 138.7 156 46.2
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 5.1e-31 138.3 160 46.9
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 6.7e-31 137.9 159 49.1
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 1.5e-30 136.7 156 46.2
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 1.5e-30 136.7 162 45.7
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 1.5e-30 136.7 169 52.1
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 2.0e-30 136.3 158 47.5
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 2.5e-30 136.0 193 47.7
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 3.3e-30 135.6 201 41.8
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 4.3e-30 135.2 166 50.0
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 5.7e-30 134.8 193 46.6
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 1.3e-29 133.7 162 46.9
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 1.3e-29 133.7 162 46.9
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 1.3e-29 133.7 162 46.9
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 1.7e-29 133.3 160 46.2
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 2.2e-29 132.9 160 43.8
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 2.8e-29 132.5 166 45.2
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 3.7e-29 132.1 156 43.6
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 3.7e-29 132.1 156 43.6
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 6.3e-29 131.3 163 44.8
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 8.2e-29 131.0 164 42.7
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 1.1e-28 130.6 173 49.7
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 1.4e-28 130.2 159 45.9
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 1.8e-28 129.8 224 35.7
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 4.1e-28 128.6 161 44.7
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 9.1e-28 127.5 160 46.9
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 2.0e-27 126.3 163 53.4
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 2.0e-27 126.3 161 44.1
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 2.0e-27 126.3 174 43.7
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 4.5e-27 125.2 154 46.1
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 5.9e-27 124.8 139 59.7
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 7.7e-27 124.4 162 44.4
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 2.2e-26 122.9 156 46.8
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 6.5e-26 121.3 153 45.1
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 1.1e-25 120.6 219 38.8
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 1.4e-25 120.2 162 42.0
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 5.5e-25 118.2 158 44.9
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 5.5e-25 118.2 159 50.3
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 1.6e-24 116.7 268 31.7
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 1.6e-24 116.7 149 45.0
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 1.0e-23 114.0 112 51.8
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 1.0e-23 114.0 174 37.4
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 3.9e-23 112.1 115 49.6
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 1.8e-20 103.2 167 37.7
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 5.3e-20 101.7 157 39.5
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 7.0e-20 101.3 82 56.1
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 1.2e-19 100.5 157 40.1
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 1.5e-19 100.1 80 55.0
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 2.0e-19 99.8 156 39.7
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 4.5e-19 98.6 158 39.2
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 1.3e-18 97.1 154 37.7
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 2.9e-18 95.9 156 37.8
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 2.9e-18 95.9 156 37.8
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 5.0e-18 95.1 81 51.9
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 1.4e-17 93.6 155 38.1
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 1.4e-17 93.6 155 38.1
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.9e-17 93.2 155 39.4
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 3.2e-17 92.4 155 38.7
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 5.5e-17 91.7 146 39.0
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 9.4e-17 90.9 153 40.5
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 9.4e-17 90.9 99 50.5
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.1e-16 89.7 80 53.8
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 4.7e-16 88.6 152 38.2
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 4.7e-16 88.6 152 38.2
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 4.7e-16 88.6 146 37.0
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 6.1e-16 88.2 100 48.0
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 6.1e-16 88.2 149 38.3
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 6.1e-16 88.2 152 37.5
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 3.9e-15 85.5 74 52.7
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 5.2e-15 85.1 81 54.3
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 8.8e-15 84.3 145 37.2
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 3.1e-12 75.9 80 47.5
Actinidia03381 Actinidia chinensis HOM05D004587 ORTHO05D005512 9.1e-12 74.3 73 54.8
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 1.2e-11 73.9 88 45.5
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 3.5e-11 72.4 97 42.3
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.2e-10 69.7 77 41.6
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 5.0e-10 68.6 102 39.2
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 3.2e-09 65.9 111 36.9
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 3.2e-09 65.9 96 38.5
Actinidia03382 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.2e-08 63.9 45 62.2
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 4.7e-08 62.0 80 40.0
Sabra19G0094000 Salix brachista HOM05D004587 ORTHO05D005512 6.1e-08 61.6 45 60.0
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 5.2e-07 58.5 87 49.4


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