Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0125500 Rhododendron simsii HOM05D006379 ORTHO05D007830 2.2e-105 385.6 189 100.0
vmacro14164 Vaccinium macrocarpon HOM05D006379 ORTHO05D007830 1.7e-28 130.2 183 46.4
Dinv25202 Davidia involucrata HOM05D006379 ORTHO05D007830 1.6e-23 113.6 188 42.6
Dinv28941 Davidia involucrata HOM05D006379 ORTHO05D007830 2.1e-23 113.2 185 42.2
Gohir.A12G209000 Gossypium hirsutum HOM05D006379 ORTHO05D007830 4.8e-23 112.1 185 42.2
Gohir.D12G211700 Gossypium hirsutum HOM05D006379 ORTHO05D007830 1.8e-22 110.2 185 41.6
Gorai.008G227300 Gossypium raimondii HOM05D006379 ORTHO05D007830 9.0e-22 107.8 191 40.3
Actinidia09219 Actinidia chinensis HOM05D006379 ORTHO05D007830 2.0e-21 106.7 187 41.2
FAN04G0985 Fragaria x ananassa HOM05D006379 ORTHO05D007830 2.0e-21 106.7 117 54.7
Hma1.2p1_0991F.1_g245020 Hydrangea macrophylla HOM05D006379 ORTHO05D007830 3.4e-21 105.9 183 43.2
Thecc.03G229900 Theobroma cacao HOM05D006379 ORTHO05D007830 3.4e-21 105.9 188 39.4
GSVIVG01013191001 Vitis vinifera HOM05D006379 ORTHO05D007830 3.4e-21 105.9 188 40.4
Cfa012418 Carpinus fangiana HOM05D006379 ORTHO05D007830 2.2e-20 103.2 190 38.9
Haze_08258 Corylus avellana HOM05D006379 ORTHO05D007830 2.2e-20 103.2 190 38.9
Manes.15G169000 Manihot esculenta HOM05D006379 ORTHO05D007830 4.9e-20 102.1 188 39.9
Sopen08g025630 Solanum pennellii HOM05D006379 ORTHO05D007830 4.9e-20 102.1 191 39.3
Solyc08g077050.3 Solanum lycopersicum HOM05D006379 ORTHO05D007830 1.4e-19 100.5 191 39.3
PGSC0003DMG400017532 Solanum tuberosum HOM05D006379 ORTHO05D007830 1.4e-19 100.5 191 38.7
AUR62007269 Chenopodium quinoa HOM05D006379 ORTHO05D007830 2.5e-19 99.8 178 40.4
CiPaw.12G062300 Carya illinoinensis HOM05D006379 ORTHO05D007830 4.2e-19 99.0 165 40.6
MSTRG.12139 Avicennia marina HOM05D006379 ORTHO05D007830 5.5e-19 98.6 186 40.3
CAN.G1659.5 Capsicum annuum HOM05D006379 ORTHO05D007830 5.5e-19 98.6 191 37.7
Nitab4.5_0001276g0050 Nicotiana tabacum HOM05D006379 ORTHO05D007830 7.1e-19 98.2 165 42.4
arahy.Tifrunner.gnm1.ann1.QRW6GR Arachis hypogaea HOM05D006379 ORTHO05D007830 9.3e-19 97.8 157 42.7
FAN13G0612 Fragaria x ananassa HOM05D006379 ORTHO05D007830 9.3e-19 97.8 148 43.9
FvH4_5g21760 Fragaria vesca HOM05D006379 ORTHO05D007830 1.2e-18 97.4 148 43.2
FAN18G2446 Fragaria x ananassa HOM05D006379 ORTHO05D007830 1.2e-18 97.4 148 43.2
Peaxi162Scf00006g00426 Petunia axillaris HOM05D006379 ORTHO05D007830 1.2e-18 97.4 162 41.4
AL1G46800 Arabidopsis lyrata HOM05D006379 ORTHO05D007830 1.6e-18 97.1 181 40.9
RcHm_v2.0_Chr7g0209251 Rosa chinensis HOM05D006379 ORTHO05D007830 3.5e-18 95.9 169 40.8
Ah.12g054900 Amaranthus hybridus HOM05D006379 ORTHO05D007830 6.0e-18 95.1 172 40.1
Duzib084G0654 Durio zibethinus HOM05D006379 ORTHO05D007830 6.0e-18 95.1 153 41.2
HanXRQChr02g0043511 Helianthus annuus HOM05D006379 ORTHO05D007830 1.0e-17 94.4 186 38.7
BcaC07g37588 Brassica carinata HOM05D006379 ORTHO05D007830 1.3e-17 94.0 179 39.1
Prupe.5G039500 Prunus persica HOM05D006379 ORTHO05D007830 1.3e-17 94.0 188 37.2
TWI81G0344 Tripterygium wilfordii HOM05D006379 ORTHO05D007830 1.3e-17 94.0 193 37.3
TAR362G0922 Trochodendron aralioides HOM05D006379 ORTHO05D007830 1.3e-17 94.0 191 37.7
CANSAT21G0322 Cannabis sativa HOM05D006379 ORTHO05D007830 1.8e-17 93.6 178 38.8
Potri.003G090400 Populus trichocarpa HOM05D006379 ORTHO05D007830 1.8e-17 93.6 155 41.9
Sc07g0008750 Simmondsia chinensis HOM05D006379 ORTHO05D007830 2.3e-17 93.2 189 39.2
Cc08_g02510 Coffea canephora HOM05D006379 ORTHO05D007830 3.0e-17 92.8 158 40.5
SalBow6G2021 Salvia bowleyana HOM05D006379 ORTHO05D007830 3.9e-17 92.4 153 41.8
A08p09010 Brassica napus HOM05D006379 ORTHO05D007830 5.1e-17 92.0 179 39.1
Carub.0001s3096 Capsella rubella HOM05D006379 ORTHO05D007830 5.1e-17 92.0 181 39.8
Sp1g28350 Schrenkiella parvula HOM05D006379 ORTHO05D007830 5.1e-17 92.0 179 39.1
THA.LOC104814439 Tarenaya hassleriana HOM05D006379 ORTHO05D007830 5.1e-17 92.0 183 39.3
AT1G32550 Arabidopsis thaliana HOM05D006379 ORTHO05D007830 6.7e-17 91.7 181 39.8
BcaB07g32954 Brassica carinata HOM05D006379 ORTHO05D007830 6.7e-17 91.7 180 40.0
ECA240G2404 Erigeron canadensis HOM05D006379 ORTHO05D007830 6.7e-17 91.7 179 39.7
Atru.chr6.1742 Acer truncatum HOM05D006379 ORTHO05D007830 8.7e-17 91.3 189 37.6
CARHR032000 Cardamine hirsuta HOM05D006379 ORTHO05D007830 8.7e-17 91.3 175 39.4
AL1G48020 Arabidopsis lyrata HOM05D006379 ORTHO05D007830 1.5e-16 90.5 180 37.8
CsaV3_3G049310 Cucumis sativus L. HOM05D006379 ORTHO05D007830 1.5e-16 90.5 154 42.2
QL12p006043 Quercus lobata HOM05D006379 ORTHO05D007830 1.5e-16 90.5 182 39.6
Aa31LG2G13410 Aethionema arabicum HOM05D006379 ORTHO05D007830 1.9e-16 90.1 144 42.4
Ciclev10032819m.g Citrus clementina HOM05D006379 ORTHO05D007830 1.9e-16 90.1 173 38.7
Sabra03G0060200 Salix brachista HOM05D006379 ORTHO05D007830 1.9e-16 90.1 175 38.3
TPR.G29030 Trifolium pratense HOM05D006379 ORTHO05D007830 1.9e-16 90.1 174 36.8
Zm00001eb217230 Zea mays HOM05D006379 ORTHO05D007830 2.5e-16 89.7 139 41.7
FAN08G2939 Fragaria x ananassa HOM05D006379 ORTHO05D007830 3.3e-16 89.4 98 53.1
MD16G1276600 Malus domestica HOM05D006379 ORTHO05D007830 3.3e-16 89.4 147 40.8
ATR0796G077 Amborella trichopoda HOM05D006379 ORTHO05D007830 5.6e-16 88.6 127 43.3
Nitab4.5_0002373g0030 Nicotiana tabacum HOM05D006379 ORTHO05D007830 7.4e-16 88.2 152 40.1
BolC8t47934H Brassica oleracea HOM05D006379 ORTHO05D007830 9.6e-16 87.8 195 35.9
Thhalv10008887m.g Eutrema salsugineum HOM05D006379 ORTHO05D007830 9.6e-16 87.8 181 38.7
Psat4g078880 Pisum sativum HOM05D006379 ORTHO05D007830 1.3e-15 87.4 147 40.8
A09p33660 Brassica napus HOM05D006379 ORTHO05D007830 1.6e-15 87.0 147 40.8
BraA09t38912Z Brassica rapa HOM05D006379 ORTHO05D007830 1.6e-15 87.0 147 40.8
CSS0003148 Camellia sinensis var. sinensis HOM05D006379 ORTHO05D007830 1.6e-15 87.0 149 40.9
Hund14407 Selenicereus undatus HOM05D006379 ORTHO05D007830 1.6e-15 87.0 148 41.9
Migut.A01031 Erythranthe guttata HOM05D006379 ORTHO05D007830 2.1e-15 86.7 183 37.2
Lalb_Chr05g0220541 Lupinus albus HOM05D006379 ORTHO05D007830 2.1e-15 86.7 183 37.2
Nn4g25240 Nelumbo nucifera HOM05D006379 ORTHO05D007830 2.1e-15 86.7 151 39.7
COL.COLO4_17063 Corchorus olitorius HOM05D006379 ORTHO05D007830 2.8e-15 86.3 188 36.2
Lj4g0008037 Lotus japonicus HOM05D006379 ORTHO05D007830 2.8e-15 86.3 151 38.4
Glyma.05G112100 Glycine max HOM05D006379 ORTHO05D007830 3.7e-15 85.9 128 42.2
Aqoxy5G02873 Aquilegia oxysepala HOM05D006379 ORTHO05D007830 6.2e-15 85.1 162 37.0
Eucgr.E00291 Eucalyptus grandis HOM05D006379 ORTHO05D007830 6.2e-15 85.1 148 39.2
Phvul.003G230200 Phaseolus vulgaris HOM05D006379 ORTHO05D007830 6.2e-15 85.1 150 39.3
BraA08t32902Z Brassica rapa HOM05D006379 ORTHO05D007830 8.2e-15 84.7 195 35.4
Medtr4g098490 Medicago truncatula HOM05D006379 ORTHO05D007830 8.2e-15 84.7 140 40.0
MD06G1032600 Malus domestica HOM05D006379 ORTHO05D007830 1.1e-14 84.3 147 39.5
PSO170G4107 Papaver somniferum HOM05D006379 ORTHO05D007830 1.4e-14 84.0 123 43.9
PSO357G0477 Papaver somniferum HOM05D006379 ORTHO05D007830 1.4e-14 84.0 123 43.9
Glyma.17G154900 Glycine max HOM05D006379 ORTHO05D007830 1.8e-14 83.6 128 41.4
Sed0015821 Sechium edule HOM05D006379 ORTHO05D007830 1.8e-14 83.6 154 39.6
AUR62018730 Chenopodium quinoa HOM05D006379 ORTHO05D007830 2.4e-14 83.2 158 36.7
Os03g0685000 Oryza sativa ssp. japonica HOM05D006379 ORTHO05D007830 3.1e-14 82.8 125 41.6
Sed0017672 Sechium edule HOM05D006379 ORTHO05D007830 3.1e-14 82.8 126 41.3
VMungo0251G0261 Vigna mungo HOM05D000740 ORTHO05D005071 5.3e-14 82.0 128 39.8
HPP92_013491 Vanilla planifolia HOM05D006379 ORTHO05D007830 9.0e-14 81.3 131 39.7
HPP92_026045 Vanilla planifolia HOM05D006379 ORTHO05D007830 1.5e-13 80.5 140 36.4
Lj2A242T73 Lonicera japonica HOM05D006379 ORTHO05D007830 2.6e-13 79.7 233 32.2
PGR004G2142 Punica granatum HOM05D006379 ORTHO05D007830 3.4e-13 79.3 126 41.3
MELO3C003395.2 Cucumis melo HOM05D006379 ORTHO05D007830 2.9e-12 76.3 37 94.6
DCAR_024971 Daucus carota HOM05D006379 ORTHO05D007830 3.8e-12 75.9 206 32.0
SEGI_19144 Sequoiadendron giganteum HOM05D006379 ORTHO05D007830 3.2e-11 72.8 128 39.1
MBI18_g03873_MAGBIO Magnolia biondii HOM05D006379 ORTHO05D007830 4.2e-11 72.4 140 36.4
SGA_v2.0_scaffold104G30206 Striga asiatica HOM05D006379 ORTHO05D007830 5.5e-11 72.0 230 29.1
SMO134G0248 Selaginella moellendorffii HOM05D006379 ORTHO05D007830 9.3e-11 71.2 126 38.9
Cpa.g.sc71.69 Carica papaya HOM05D006379 ORTHO05D007830 3.5e-10 69.3 53 67.9
Ca_22070_v3 Cicer arietinum L. HOM05D006379 ORTHO05D007830 3.5e-10 69.3 224 28.6
BcaB04g17950 Brassica carinata HOM05D006379 ORTHO05D007830 4.6e-10 68.9 127 39.4
unitig_744.g24478 Utricularia gibba HOM05D006379 ORTHO05D007830 4.6e-10 68.9 177 32.8
Pp3c17_15760 Physcomitrium patens HOM05D006379 ORTHO05D007830 1.0e-09 67.8 127 34.6
AagrBONN_evm.TU.Sc2ySwM_228.4201 Anthoceros agrestis HOM05D006379 ORTHO05D007830 3.0e-09 66.2 139 36.0
C05p32020 Brassica napus HOM05D006379 ORTHO05D007830 3.9e-09 65.9 53 64.2
Nitab4.5_0000089g0020 Nicotiana tabacum HOM05D006379 ORTHO05D007830 5.1e-09 65.5 140 37.1
BolC5t31928H Brassica oleracea HOM05D006379 ORTHO05D007830 6.7e-09 65.1 52 65.4
CSS0039884 Camellia sinensis var. sinensis HOM05D006379 ORTHO05D007830 1.5e-08 63.9 84 48.8
CSS0002978 Camellia sinensis var. sinensis HOM05D006379 ORTHO05D007830 1.9e-08 63.5 76 51.3
Duzib205G0717 Durio zibethinus HOM05D006379 ORTHO05D007830 7.4e-08 61.6 158 33.5
Mapoly0177s0016 Marchantia polymorpha HOM05D006379 ORTHO05D007830 2.8e-07 59.7 123 35.0
FAN10G0731 Fragaria x ananassa HOM05D000053 ORTHO05D000035 3.7e-07 59.3 47 63.8
FAN10G3344 Fragaria x ananassa HOM05D000053 ORTHO05D000035 1.8e-06 57.0 52 57.7
Potri.003G176400 Populus trichocarpa HOM05D006379 ORTHO05D007830 1.8e-06 57.0 50 60.0
FAN10G1237 Fragaria x ananassa HOM05D006379 ORTHO05D007830 6.9e-06 55.1 53 54.7


User provided reference genes

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