Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 1.0e-58 229.9 122 100.0
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 3.1e-31 138.7 76 93.4
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.6e-27 126.3 132 57.6
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 3.9e-26 121.7 80 80.0
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 3.9e-26 121.7 80 80.0
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 4.8e-24 114.8 80 73.8
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 8.1e-24 114.0 86 70.9
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 8.1e-24 114.0 117 55.6
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 1.4e-23 113.2 75 77.3
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 3.1e-23 112.1 83 71.1
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 4.0e-23 111.7 86 70.9
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 4.0e-23 111.7 91 63.7
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 1.5e-22 109.8 130 52.3
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 2.0e-22 109.4 75 74.7
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 2.6e-22 109.0 122 53.3
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 2.6e-22 109.0 75 74.7
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 3.4e-22 108.6 80 72.5
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 7.6e-22 107.5 81 66.7
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 9.9e-22 107.1 86 66.3
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 9.9e-22 107.1 80 67.5
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 1.3e-21 106.7 86 65.1
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 1.7e-21 106.3 99 63.6
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 1.7e-21 106.3 76 69.7
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 2.2e-21 105.9 118 53.4
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 2.2e-21 105.9 89 65.2
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 2.2e-21 105.9 80 67.5
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 3.8e-21 105.1 108 54.6
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 3.8e-21 105.1 69 76.8
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 4.9e-21 104.8 80 67.5
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 4.9e-21 104.8 110 57.3
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 4.9e-21 104.8 75 70.7
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 4.9e-21 104.8 80 73.8
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 6.4e-21 104.4 89 62.9
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 6.4e-21 104.4 81 66.7
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 6.4e-21 104.4 70 74.3
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 6.4e-21 104.4 91 62.6
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 6.4e-21 104.4 71 74.6
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 6.4e-21 104.4 85 68.2
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.1e-20 103.6 87 64.4
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 1.1e-20 103.6 86 67.4
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 1.4e-20 103.2 73 72.6
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.4e-20 103.2 90 61.1
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.4e-20 103.2 80 66.2
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.9e-20 102.8 89 61.8
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 1.9e-20 102.8 81 65.4
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 2.4e-20 102.4 80 67.5
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 2.4e-20 102.4 91 61.5
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 2.4e-20 102.4 75 68.0
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 4.2e-20 101.7 79 69.6
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 5.4e-20 101.3 110 54.5
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 7.1e-20 100.9 72 70.8
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 7.1e-20 100.9 86 61.6
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.2e-19 100.1 75 68.0
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.2e-19 100.1 75 66.7
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 1.2e-19 100.1 76 68.4
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.6e-19 99.8 73 68.5
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 2.1e-19 99.4 80 66.2
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 3.5e-19 98.6 69 73.9
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 4.6e-19 98.2 74 68.9
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 4.6e-19 98.2 80 63.8
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 6.0e-19 97.8 75 66.7
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 6.0e-19 97.8 80 63.8
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 6.0e-19 97.8 80 63.8
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 6.0e-19 97.8 71 74.6
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 7.9e-19 97.4 82 59.8
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 7.9e-19 97.4 79 68.4
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.3e-18 96.7 121 49.6
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 1.3e-18 96.7 109 52.3
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 1.3e-18 96.7 73 68.5
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 1.3e-18 96.7 70 67.1
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 1.7e-18 96.3 80 62.5
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 2.3e-18 95.9 79 63.3
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 3.9e-18 95.1 84 60.7
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 1.5e-17 93.2 81 61.7
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 2.5e-17 92.4 80 58.8
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 4.3e-17 91.7 90 56.7
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 4.3e-17 91.7 47 95.7
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 7.3e-17 90.9 108 51.9
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 9.6e-17 90.5 75 61.3
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 2.4e-15 85.9 75 61.3
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 2.4e-15 85.9 75 61.3
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.4e-15 85.9 89 55.1
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.4e-15 85.9 75 58.7
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 3.1e-15 85.5 75 61.3
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 4.0e-15 85.1 75 61.3
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 4.0e-15 85.1 70 62.9
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 5.3e-15 84.7 75 61.3
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 5.3e-15 84.7 75 61.3
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 5.3e-15 84.7 75 61.3
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 5.3e-15 84.7 75 61.3
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 5.3e-15 84.7 75 61.3
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 9.0e-15 84.0 75 60.0
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 1.2e-14 83.6 75 61.3
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.6e-14 82.4 67 58.2
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 4.5e-14 81.6 75 58.7
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 9.9e-14 80.5 75 60.0
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 4.9e-13 78.2 54 74.1
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 1.1e-12 77.0 58 63.8
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 6.0e-11 71.2 59 61.0
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 7.9e-11 70.9 54 66.7
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 3.0e-10 68.9 41 80.5
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 3.9e-10 68.6 41 80.5
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 3.9e-10 68.6 51 64.7
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 9.6e-09 63.9 49 65.3
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 2.1e-08 62.8 49 61.2
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 1.4e-07 60.1 63 50.8


User provided reference genes

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