Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 4.1e-71 271.6 166 100.0
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 3.2e-63 245.4 185 85.9
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 2.7e-62 242.3 161 86.3
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.4e-55 219.9 164 75.6
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 3.0e-53 212.2 164 72.0
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 2.4e-50 202.6 164 69.5
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 6.9e-50 201.1 153 73.2
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 9.0e-50 200.7 165 66.7
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 3.4e-49 198.7 131 77.9
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 4.4e-49 198.4 166 68.7
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 1.3e-48 196.8 164 65.9
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 2.9e-48 195.7 164 66.5
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 2.9e-48 195.7 128 80.5
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.4e-47 193.4 131 76.3
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 1.4e-47 193.4 128 79.7
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 1.9e-47 193.0 164 64.0
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 4.2e-47 191.8 163 63.2
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 5.4e-47 191.4 128 78.9
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 1.6e-46 189.9 164 64.0
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 4.6e-46 188.3 155 65.8
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 4.6e-46 188.3 154 64.9
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.3e-45 186.8 128 77.3
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 1.3e-45 186.8 128 77.3
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.7e-45 186.4 128 76.6
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.7e-45 186.4 128 78.1
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 1.7e-45 186.4 126 77.0
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 3.9e-45 185.3 127 77.2
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 3.9e-45 185.3 131 74.0
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 8.7e-45 184.1 158 63.3
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 1.1e-44 183.7 128 74.2
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.1e-44 183.7 131 70.2
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.5e-44 183.3 160 63.1
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 1.9e-44 183.0 131 73.3
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.5e-44 182.6 164 62.2
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 2.5e-44 182.6 123 78.0
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.3e-44 182.2 158 62.7
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 4.3e-44 181.8 158 62.7
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 7.3e-44 181.0 128 73.4
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 9.6e-44 180.6 130 71.5
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.6e-44 180.6 127 73.2
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.6e-44 180.6 127 73.2
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 9.6e-44 180.6 128 72.7
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 1.3e-43 180.3 130 70.8
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 1.3e-43 180.3 129 71.3
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 3.6e-43 178.7 158 60.8
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 6.2e-43 177.9 126 72.2
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 6.2e-43 177.9 128 71.9
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 8.1e-43 177.6 128 72.7
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.4e-42 176.8 164 64.0
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 5.3e-42 174.9 129 69.8
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 6.9e-42 174.5 125 72.0
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 9.0e-42 174.1 130 68.5
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 2.0e-41 172.9 130 67.7
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 2.6e-41 172.6 130 70.8
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 2.6e-41 172.6 164 61.0
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.4e-41 172.2 127 67.7
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 4.5e-41 171.8 153 60.8
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 5.8e-41 171.4 127 68.5
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 5.8e-41 171.4 127 67.7
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 5.8e-41 171.4 127 67.7
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 7.6e-41 171.0 126 69.8
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 1.3e-40 170.2 129 67.4
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.7e-40 169.9 131 68.7
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.7e-40 169.9 126 68.3
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 2.2e-40 169.5 131 66.4
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 4.9e-40 168.3 131 64.9
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.9e-40 168.3 126 67.5
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.9e-40 168.3 126 67.5
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 6.4e-40 167.9 130 66.9
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 6.4e-40 167.9 112 75.9
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 6.4e-40 167.9 130 66.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 6.4e-40 167.9 123 71.5
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.1e-39 167.2 131 65.6
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 1.1e-39 167.2 128 68.0
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 1.1e-39 167.2 121 72.7
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 2.4e-39 166.0 124 68.5
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 3.2e-39 165.6 128 66.4
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 7.1e-39 164.5 141 61.7
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.6e-38 163.3 113 72.6
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 1.0e-37 160.6 125 68.0
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.3e-37 160.2 131 64.1
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 2.3e-37 159.5 222 46.8
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 3.0e-37 159.1 128 61.7
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 3.9e-37 158.7 128 62.5
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 3.9e-37 158.7 164 54.9
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.1e-36 157.1 131 59.5
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 1.1e-36 157.1 131 59.5
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.5e-36 156.8 128 62.5
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.5e-36 156.0 148 57.4
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 3.3e-36 155.6 123 67.5
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 2.1e-35 152.9 128 60.9
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 2.1e-35 152.9 128 60.9
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 2.1e-35 152.9 128 60.9
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 2.8e-35 152.5 128 60.2
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 2.8e-35 152.5 128 60.2
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.8e-35 152.5 157 54.1
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.8e-35 152.5 128 62.5
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 3.7e-35 152.1 128 60.9
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 8.1e-35 151.0 164 48.8
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 8.1e-35 151.0 125 64.8
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.4e-34 150.2 123 65.0
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.8e-34 149.8 152 54.6
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 5.3e-34 148.3 128 59.4
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 1.5e-33 146.7 124 62.1
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 1.7e-32 143.3 128 58.6
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.8e-32 142.1 128 59.4
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 6.5e-32 141.4 128 56.2
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 1.1e-31 140.6 128 58.6
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.2e-31 138.7 113 67.3
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 7.1e-31 137.9 128 56.2
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 9.3e-31 137.5 128 57.8
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 1.6e-30 136.7 110 66.4
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 6.7e-29 131.3 164 50.6
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 7.4e-28 127.9 107 61.7
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 2.8e-27 125.9 286 34.3
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.1e-26 124.0 92 71.7
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 7.9e-22 107.8 73 74.0
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 6.3e-19 98.2 91 60.4
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 3.1e-18 95.9 70 67.1
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 9.0e-18 94.4 128 43.0
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 3.8e-16 89.0 123 46.3
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 3.8e-16 89.0 123 46.3
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.8e-13 80.1 101 47.5
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 3.7e-11 72.4 50 74.0
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.4e-10 69.7 54 70.4


User provided reference genes

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