Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 2.2e-81 305.8 185 100.0
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 4.2e-64 248.4 185 85.9
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 8.4e-57 224.2 180 75.0
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.5e-50 203.4 183 65.0
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.6e-47 193.4 183 62.3
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 2.1e-47 193.0 149 71.1
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.3e-46 190.3 184 59.8
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 8.7e-46 187.6 149 67.8
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 1.9e-45 186.4 147 70.1
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 3.3e-45 185.7 149 70.5
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 7.4e-45 184.5 145 69.7
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 9.7e-45 184.1 147 69.4
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.3e-44 183.7 149 67.1
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 1.3e-44 183.7 149 66.4
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 3.7e-44 182.2 147 68.7
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 3.7e-44 182.2 147 66.7
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 2.4e-43 179.5 147 67.3
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 3.1e-43 179.1 145 66.9
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 5.3e-43 178.3 147 66.0
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 5.3e-43 178.3 147 66.0
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 9.1e-43 177.6 149 64.4
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 9.1e-43 177.6 147 67.3
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 9.1e-43 177.6 147 67.3
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 9.1e-43 177.6 147 68.0
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 9.1e-43 177.6 145 66.9
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.2e-42 177.2 147 66.7
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 2.0e-42 176.4 146 67.1
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 3.4e-42 175.6 147 65.3
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 5.9e-42 174.9 147 64.6
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.0e-41 174.1 148 63.5
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 1.7e-41 173.3 147 64.6
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.7e-41 173.3 142 67.6
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 2.2e-41 172.9 147 61.9
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 3.8e-41 172.2 147 63.9
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 5.0e-41 171.8 149 62.4
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.0e-41 171.8 146 63.7
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.0e-41 171.8 146 63.7
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 6.5e-41 171.4 149 61.7
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 6.5e-41 171.4 147 63.3
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 8.5e-41 171.0 148 62.2
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.1e-40 170.6 149 63.1
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.4e-40 170.2 145 64.8
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 3.2e-40 169.1 145 62.8
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 4.2e-40 168.7 145 64.1
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 4.2e-40 168.7 147 62.6
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 5.5e-40 168.3 147 63.3
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 7.2e-40 167.9 145 64.1
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 9.4e-40 167.5 149 58.4
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 3.6e-39 165.6 148 60.8
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 4.6e-39 165.2 144 62.5
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 4.6e-39 165.2 149 59.7
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 7.9e-39 164.5 145 62.1
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 7.9e-39 164.5 194 52.6
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 1.0e-38 164.1 149 59.1
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.0e-38 164.1 149 59.1
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 1.4e-38 163.7 149 61.7
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.8e-38 163.3 146 58.9
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 3.0e-38 162.5 146 59.6
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.0e-38 162.5 146 58.9
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 3.0e-38 162.5 146 58.9
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 3.9e-38 162.2 145 60.7
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 6.7e-38 161.4 138 63.0
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 8.8e-38 161.0 145 59.3
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 8.8e-38 161.0 148 58.8
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.1e-37 160.6 149 60.4
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 2.6e-37 159.5 149 58.4
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.6e-37 159.5 145 58.6
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.6e-37 159.5 145 58.6
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 3.3e-37 159.1 149 58.4
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 3.3e-37 159.1 149 57.7
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 5.7e-37 158.3 131 64.9
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 5.7e-37 158.3 147 59.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 5.7e-37 158.3 142 62.0
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 7.4e-37 157.9 140 62.9
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 9.7e-37 157.5 149 56.4
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 9.7e-37 157.5 143 64.3
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 1.7e-36 156.8 147 57.8
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 1.7e-36 156.8 143 59.4
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 2.2e-36 156.4 149 57.0
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.1e-35 154.1 132 62.1
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 6.9e-35 151.4 144 59.0
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 1.5e-34 150.2 147 53.7
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 2.0e-34 149.8 147 54.4
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 2.0e-34 149.8 143 55.9
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 5.9e-34 148.3 143 58.0
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 7.7e-34 147.9 149 52.3
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 7.7e-34 147.9 149 52.3
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 7.7e-34 147.9 147 54.4
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.3e-33 147.1 167 50.9
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 2.2e-33 146.4 142 58.5
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 1.1e-32 144.1 147 53.1
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 1.1e-32 144.1 147 53.1
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 1.1e-32 144.1 147 53.1
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 1.4e-32 143.7 147 52.4
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 1.4e-32 143.7 147 52.4
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.4e-32 143.7 176 48.3
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.4e-32 143.7 147 54.4
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.9e-32 143.3 147 53.1
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 5.5e-32 141.7 144 56.2
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 9.4e-32 141.0 142 56.3
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.2e-31 140.6 136 58.1
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 1.2e-31 140.6 147 51.7
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.7e-31 139.4 147 51.7
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 7.9e-31 137.9 143 53.8
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 1.4e-30 137.1 286 36.7
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 6.7e-30 134.8 147 51.0
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 2.0e-29 133.3 147 51.7
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 2.6e-29 132.9 147 49.0
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 4.4e-29 132.1 147 51.0
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 4.4e-29 132.1 140 55.7
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 2.8e-28 129.4 147 49.0
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 3.7e-28 129.0 132 57.6
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 4.8e-28 128.6 147 50.3
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 5.9e-26 121.7 76 81.6
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 6.5e-25 118.2 126 52.4
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 7.2e-24 114.8 111 59.5
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 7.0e-19 98.2 92 58.7
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 4.2e-16 89.0 110 50.0
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 4.7e-15 85.5 147 37.4
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 6.1e-15 85.1 88 52.3
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 3.0e-14 82.8 142 40.1
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 3.0e-14 82.8 142 40.1
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 1.4e-11 73.9 50 74.0
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.8e-11 73.6 119 40.3
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 7.0e-11 71.6 48 75.0


User provided reference genes

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