Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.3e-98 361.3 182 100.0
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 1.8e-75 286.2 179 78.8
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 6.4e-57 224.6 182 63.2
Rhsim07G0114200 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.0e-48 194.5 213 51.6
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.5e-47 192.2 185 58.9
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.0e-47 191.4 183 60.1
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.0e-47 191.4 181 59.7
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.6e-46 187.6 152 65.1
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.2e-44 183.7 152 63.8
Rhsim07G0114500 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.8e-43 179.9 136 66.2
Rhsim07G0112900 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.8e-39 164.5 207 50.7
Rhsim07G0114700 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.3e-35 152.9 113 72.6
Rhsim01G0128400 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.0e-35 152.1 150 52.7
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.2e-35 151.8 241 40.2
Rhsim07G0114400 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.2e-35 151.8 153 53.6
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 2.0e-34 149.8 149 51.7
Rhsim07G0113500 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.7e-33 146.7 150 53.3
Rhsim07G0114100 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.9e-33 145.2 150 51.3
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.7e-28 128.6 114 56.1
Rhsim05G0025300 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.2e-25 119.8 114 53.5
Rhsim05G0036000 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.4e-25 118.2 114 54.4
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.0e-22 109.4 176 38.6
Rhsim05G0034100 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.1e-22 108.6 106 53.8
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.1e-19 100.9 147 41.5
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.6e-18 96.3 148 37.8
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.4e-18 95.9 143 41.3
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 7.6e-18 94.7 147 40.8
Rhsim07G0112200 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.9e-17 92.8 84 63.1
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.8e-17 92.4 149 38.9
Rhsim07G0113400 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.1e-16 88.2 84 54.8
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 2.1e-15 86.7 137 40.1
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 2.1e-15 86.7 171 33.9
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 2.7e-15 86.3 158 34.2
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 4.6e-15 85.5 168 34.5
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 2.3e-14 83.2 140 38.6
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 2.3e-14 83.2 197 33.5
Rhsim07G0115000 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.7e-14 81.3 93 46.2
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.1e-13 80.9 119 39.5
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 3.3e-13 79.3 146 35.6
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 4.3e-13 79.0 166 33.1
Nitab4.5_0003050g0040 Nicotiana tabacum HOM05D008848 ORTHO05D008136 1.6e-12 77.0 90 44.4
Rhsim07G0113900 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.1e-12 76.6 78 50.0
Lsat_1_v5_gn_9_77681 Lactuca sativa HOM05D008848 ORTHO05D008136 2.8e-12 76.3 134 35.8
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 4.8e-12 75.5 102 43.1
Rhsim07G0113800 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.2e-12 75.1 75 52.0
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 6.2e-12 75.1 122 37.7
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 1.4e-11 73.9 124 37.1
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 6.9e-11 71.6 122 35.2
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 4.5e-10 68.9 118 36.4
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 5.8e-10 68.6 132 34.8
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 5.8e-10 68.6 111 36.0
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 1.7e-09 67.0 116 37.9
Actinidia31512 Actinidia chinensis HOM05D008848 ORTHO05D008136 2.9e-09 66.2 139 35.3
Peaxi162Scf00102g00938 Petunia axillaris HOM05D008848 ORTHO05D008136 8.4e-09 64.7 134 34.3
QL07p012914 Quercus lobata HOM05D008848 ORTHO05D008136 2.4e-08 63.2 179 31.3
DCAR_002190 Daucus carota HOM05D020340 ORTHO05D008136 3.2e-08 62.8 137 35.8
Manes.17G056250 Manihot esculenta HOM05D008848 ORTHO05D008136 4.2e-08 62.4 125 36.8
Medtr7g075160 Medicago truncatula HOM05D028937 ORTHO05D008136 9.3e-08 61.2 132 31.8
TPR.G18156 Trifolium pratense HOM05D008683 ORTHO05D010884 1.2e-07 60.8 119 36.1
Medtr8g028365 Medicago truncatula HOM05D008683 ORTHO05D010884 1.6e-07 60.5 124 33.9
Medtr8g028315 Medicago truncatula HOM05D008683 ORTHO05D010884 2.1e-07 60.1 111 39.6
TPR.G22850 Trifolium pratense HOM05D008683 ORTHO05D010884 2.7e-07 59.7 112 35.7
Medtr8g028350 Medicago truncatula HOM05D008683 ORTHO05D010884 3.5e-07 59.3 118 35.6
Medtr8g028360 Medicago truncatula HOM05D008683 ORTHO05D010884 4.6e-07 58.9 100 38.0
Hma1.2p1_0316F.1_g122780 Hydrangea macrophylla HOM05D010926 ORTHO05D008136 6.0e-07 58.5 124 29.0
Medtr8g028300 Medicago truncatula HOM05D008683 ORTHO05D010884 6.0e-07 58.5 129 32.6
QL07p012771 Quercus lobata HOM05D008848 ORTHO05D008136 7.9e-07 58.2 178 28.7
Psat4g213640 Pisum sativum HOM05D008683 ORTHO05D010884 1.3e-06 57.4 106 36.8
Rhsim07G0111600 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.3e-06 57.4 83 41.0
Glyma.07G065900 Glycine max HOM05D008683 ORTHO05D010884 1.8e-06 57.0 116 34.5
Psat1g148400 Pisum sativum HOM05D008683 ORTHO05D010884 1.8e-06 57.0 113 32.7
Prupe.2G143100 Prunus persica HOM05D012558 ORTHO05D012876 1.8e-06 57.0 138 34.1
TPR.G22846 Trifolium pratense HOM05D008683 ORTHO05D010884 2.3e-06 56.6 115 34.8
Prupe.2G143000 Prunus persica HOM05D012558 ORTHO05D012876 3.0e-06 56.2 132 37.1
FAN21G0420 Fragaria x ananassa HOM05D015530 ORTHO05D008136 3.9e-06 55.8 119 32.8
Oeu020784.1 Olea europaea HOM05D009287 ORTHO05D008136 5.1e-06 55.5 121 36.4
Oeu020788.1 Olea europaea HOM05D009287 ORTHO05D008136 6.7e-06 55.1 105 34.3
FvH4_3g38201 Fragaria vesca HOM05D015530 ORTHO05D008136 8.7e-06 54.7 119 31.9
Medtr7g086850 Medicago truncatula HOM05D008683 ORTHO05D010884 8.7e-06 54.7 117 32.5
Medtr8g028355 Medicago truncatula HOM05D008683 ORTHO05D010884 8.7e-06 54.7 132 31.8


User provided reference genes

Program Settings