Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 0.0e+00 1135.6 565 100.0
Rhsim01G0164200 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.6e-109 400.2 508 49.0
RhsimUnG0233400 Rhododendron simsii HOM05D000906 ORTHO05D000713 8.5e-76 288.9 442 42.5
Rhsim01G0085000 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.4e-73 281.6 274 58.0
Rhsim12G0055600 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.7e-71 273.5 300 49.7
Rhsim10G0189800 Rhododendron simsii HOM05D008652 ORTHO05D010516 7.0e-70 269.2 300 49.0
Rhsim01G0036900 Rhododendron simsii HOM05D008652 ORTHO05D010516 7.7e-69 265.8 325 46.8
Rhsim02G0247600 Rhododendron simsii HOM05D008652 ORTHO05D010516 4.7e-66 256.5 313 46.6
Rhsim04G0077700 Rhododendron simsii HOM05D008652 ORTHO05D010516 6.5e-60 236.1 304 45.4
Rhsim07G0114500 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.3e-59 233.8 136 86.8
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.5e-56 224.9 182 63.2
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 9.2e-54 215.7 176 59.7
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.0e-52 212.2 182 64.8
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.3e-52 211.1 166 66.3
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.6e-52 209.1 182 63.2
Rhsim07G0112900 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.0e-46 189.5 206 56.3
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.5e-43 181.0 152 62.5
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.1e-41 175.6 149 61.7
Rhsim07G0114200 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.1e-41 174.1 213 47.4
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.3e-35 154.1 212 44.8
Rhsim09G0135400 Rhododendron simsii HOM05D008652 ORTHO05D010516 7.3e-35 152.9 296 37.8
Rhsim07G0113500 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.2e-34 149.8 150 52.7
Rhsim01G0128400 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.3e-33 147.9 150 52.0
Rhsim07G0114400 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.3e-33 147.9 153 52.9
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 2.0e-32 144.8 149 50.3
Rhsim07G0114100 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.9e-31 140.2 150 50.0
Rhsim02G0050900 Rhododendron simsii HOM05D002672 ORTHO05D002887 4.6e-29 133.7 194 36.6
Rhsim07G0114700 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.6e-27 126.7 113 58.4
RcHm_v2.0_Chr6g0263201 Rosa chinensis HOM05D009186 ORTHO05D011460 1.2e-26 125.6 227 30.0
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.9e-25 119.4 115 48.7
RhsimUnG0049600 Rhododendron simsii HOM05D008652 ORTHO05D010516 8.4e-23 112.8 311 34.1
Rhsim05G0025300 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.2e-21 109.0 115 47.0
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 7.8e-21 106.3 148 43.2
Rhsim05G0036000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.1e-19 102.4 115 44.3
Rhsim07G0112200 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.5e-19 102.1 84 66.7
Rhsim10G0117300 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.8e-18 97.8 146 45.2
Rhsim05G0034100 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-17 95.5 106 46.2
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 1.8e-17 95.1 138 41.3
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 4.0e-17 94.0 173 38.2
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.0e-17 94.0 144 40.3
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 6.9e-17 93.2 137 39.4
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.2e-16 92.4 151 40.4
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.6e-16 91.3 143 40.6
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.6e-16 91.3 130 43.1
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 7.6e-16 89.7 164 33.5
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 7.6e-16 89.7 148 39.9
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 2.9e-15 87.8 150 33.3
Rhsim10G0127300 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.9e-15 87.8 301 27.6
RhsimUnG0225400 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.4e-14 84.7 212 33.0
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.2e-14 84.3 121 43.0
FAN16G2863 Fragaria x ananassa HOM05D009186 ORTHO05D011460 5.4e-14 83.6 214 26.6
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 5.4e-14 83.6 120 39.2
Rhsim09G0159700 Rhododendron simsii HOM05D008652 ORTHO05D010516 5.4e-14 83.6 199 33.7
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 7.1e-14 83.2 131 36.6
CSS0042340 Camellia sinensis var. sinensis HOM05D058731 ORTHO05D010516 2.7e-13 81.3 65 56.9
Rhsim01G0036800 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.7e-13 81.3 199 33.2
Rhsim11G0116900 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.7e-13 81.3 199 33.2
Rhsim13G0214800 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.7e-13 81.3 199 33.2
Rhsim13G0215000 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.7e-13 81.3 199 33.2
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 3.5e-13 80.9 139 40.3
TWI38G1206 Tripterygium wilfordii HOM05D000047 ORTHO05D014218 3.5e-13 80.9 170 28.8
Rhsim02G0196700 Rhododendron simsii HOM05D008652 ORTHO05D010516 4.6e-13 80.5 172 38.4
Rhsim01G0057100 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.0e-12 79.3 198 32.8
Rhsim07G0115000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.0e-12 79.3 93 45.2
Rhsim09G0174400 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.0e-12 79.3 224 31.7
Rhsim11G0091900 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.0e-12 79.3 224 31.7
RhsimUnG0190200 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.0e-12 79.3 224 31.7
Rhsim01G0057400 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.3e-12 79.0 165 35.2
Rhsim07G0001400 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.3e-12 79.0 224 31.7
Rhsim05G0058300 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.7e-12 78.6 165 34.5
RhsimUnG0066600 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.3e-12 78.2 215 31.6
RhsimUnG0066700 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.3e-12 78.2 215 31.6
Rhsim07G0113400 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.9e-12 77.4 89 49.4
RhsimUnG0103900 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.9e-12 77.4 166 39.2
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 6.6e-12 76.6 159 35.8
Rhsim06G0123400 Rhododendron simsii HOM05D008652 ORTHO05D000423 6.6e-12 76.6 190 33.7
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 1.1e-11 75.9 143 37.1
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 2.5e-11 74.7 126 37.3
RhsimUnG0184800 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.3e-11 74.3 166 38.6
Rhsim07G0113900 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.3e-11 73.2 68 54.4
RhsimUnG0235400 Rhododendron simsii HOM05D008652 ORTHO05D010516 7.3e-11 73.2 137 38.7
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 2.1e-10 71.6 129 36.4
Rhsim01G0137700 Rhododendron simsii HOM05D008652 ORTHO05D010516 2.1e-10 71.6 107 45.8
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 6.2e-10 70.1 134 37.3
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 8.1e-10 69.7 124 32.3
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 1.8e-09 68.6 108 38.9
Nitab4.5_0003050g0040 Nicotiana tabacum HOM05D008848 ORTHO05D008136 2.4e-09 68.2 87 40.2
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 5.3e-09 67.0 120 33.3
Rhsim02G0080500 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.2e-08 65.9 156 32.1
TPR.G22850 Trifolium pratense HOM05D008683 ORTHO05D010884 1.5e-08 65.5 151 30.5
Manes.17G056250 Manihot esculenta HOM05D008848 ORTHO05D008136 2.0e-08 65.1 114 37.7
Medtr6g042420 Medicago truncatula HOM05D007951 ORTHO05D010060 2.0e-08 65.1 135 28.1
Hma1.2p1_0316F.1_g122780 Hydrangea macrophylla HOM05D010926 ORTHO05D008136 5.8e-08 63.5 99 35.4
Nitab4.5_0001023g0070 Nicotiana tabacum HOM05D015745 ORTHO05D010516 5.8e-08 63.5 56 51.8
vmacro14277 Vaccinium macrocarpon HOM05D002531 ORTHO05D003018 7.6e-08 63.2 85 37.6
Glyma.07G061900 Glycine max HOM05D008683 ORTHO05D010884 9.9e-08 62.8 132 31.8
MBI10_g15975_MAGBIO Magnolia biondii HOM05D009186 ORTHO05D011460 9.9e-08 62.8 82 41.5
Rhsim11G0082000 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.3e-07 62.4 83 43.4
Medtr1g052285 Medicago truncatula HOM05D007951 ORTHO05D010060 1.7e-07 62.0 133 24.1
Rhsim04G0124600 Rhododendron simsii HOM05D008652 ORTHO05D010516 1.7e-07 62.0 76 46.1
Glyma.07G061700 Glycine max HOM05D008683 ORTHO05D010884 3.8e-07 60.8 127 32.3
Rhsim10G0135200 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.8e-07 60.8 75 48.0
Lsat_1_v5_gn_9_77681 Lactuca sativa HOM05D008848 ORTHO05D008136 8.4e-07 59.7 140 29.3
Psat1g148400 Pisum sativum HOM05D008683 ORTHO05D010884 1.9e-06 58.5 107 35.5
Glyma.07G066200 Glycine max HOM05D008683 ORTHO05D010884 3.2e-06 57.8 134 35.1
PGSC0003DMG400033155 Solanum tuberosum HOM05D008848 ORTHO05D008136 4.2e-06 57.4 156 30.1
vmacro11475 Vaccinium macrocarpon HOM05D007585 ORTHO05D009515 4.2e-06 57.4 68 45.6
MBI14_g25534_MAGBIO Magnolia biondii HOM05D009186 ORTHO05D011460 5.4e-06 57.0 69 40.6
Medtr7g075160 Medicago truncatula HOM05D028937 ORTHO05D008136 5.4e-06 57.0 97 34.0
TPR.G18156 Trifolium pratense HOM05D008683 ORTHO05D010884 5.4e-06 57.0 101 36.6
FAN03G2804 Fragaria x ananassa HOM05D012558 ORTHO05D012876 7.1e-06 56.6 163 30.7


User provided reference genes

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