Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0113500 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.1e-82 307.0 151 100.0
Rhsim07G0114200 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.9e-73 277.3 151 92.1
Rhsim07G0114400 Rhododendron simsii HOM05D009466 ORTHO05D008136 9.9e-72 273.5 154 89.0
Rhsim01G0128400 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.3e-68 263.1 151 86.1
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 3.6e-66 255.0 150 82.7
Rhsim07G0114100 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.6e-64 248.8 151 81.5
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 2.1e-37 159.5 149 53.0
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 5.7e-35 151.4 150 52.7
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.8e-34 148.3 150 53.3
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.3e-33 144.8 152 55.3
Rhsim07G0114500 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.6e-32 142.5 137 55.5
Rhsim07G0113900 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.8e-31 138.7 66 97.0
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.5e-31 137.5 123 59.3
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-30 136.7 152 52.6
Rhsim07G0112900 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.6e-29 133.3 152 52.0
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.7e-27 124.8 119 54.6
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.8e-25 119.8 120 52.5
Rhsim07G0113400 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.4e-25 119.4 91 69.2
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.6e-24 115.9 118 50.8
Rhsim07G0114700 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.3e-23 113.6 113 56.6
Rhsim05G0036000 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.2e-22 108.6 118 48.3
Rhsim05G0025300 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.2e-22 107.8 118 49.2
Rhsim07G0113800 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.9e-21 104.4 77 68.8
Rhsim05G0034100 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.3e-18 97.1 103 50.5
Rhsim07G0112200 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.2e-18 96.3 87 63.2
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.2e-15 86.3 76 53.9
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 9.4e-14 80.9 130 40.8
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.6e-13 79.0 122 41.0
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 4.7e-13 78.6 148 33.8
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.4e-12 77.0 122 41.8
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.2e-11 73.9 122 39.3
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.5e-11 73.6 98 44.9
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.0e-11 73.2 122 38.5
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 4.4e-11 72.0 117 38.5
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 5.7e-11 71.6 122 37.7
Rhsim07G0115000 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.2e-10 69.7 96 38.5
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 1.8e-09 66.6 117 35.9
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 4.1e-09 65.5 108 36.1
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 3.5e-08 62.4 114 36.8
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 4.5e-08 62.0 111 39.6
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 1.3e-07 60.5 97 36.1
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 1.3e-07 60.5 107 34.6
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 1.7e-07 60.1 95 37.9
Actinidia31512 Actinidia chinensis HOM05D008848 ORTHO05D008136 2.9e-07 59.3 151 31.8
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 1.5e-06 57.0 118 33.9
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 1.9e-06 56.6 89 39.3
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 1.9e-06 56.6 103 35.9
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 2.5e-06 56.2 108 32.4
Nitab4.5_0003050g0040 Nicotiana tabacum HOM05D008848 ORTHO05D008136 7.2e-06 54.7 52 46.2


User provided reference genes

Program Settings