Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.1e-97 357.5 176 100.0
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.7e-92 340.5 176 96.0
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.6e-55 219.2 153 71.9
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.3e-54 214.2 170 66.5
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.4e-53 211.5 169 66.3
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.8e-47 191.4 152 65.1
Rhsim07G0112900 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.9e-46 189.1 193 56.5
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 7.0e-45 184.5 152 62.5
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 2.0e-44 183.0 150 61.3
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.9e-37 159.8 118 65.3
Rhsim07G0114200 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.8e-36 154.5 186 47.8
Rhsim07G0114500 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.6e-28 130.2 106 62.3
Rhsim07G0114400 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.1e-26 124.0 119 54.6
Rhsim01G0128400 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.9e-26 123.2 119 54.6
Rhsim07G0113500 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.5e-26 122.9 119 54.6
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 4.3e-26 122.1 119 53.8
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.7e-25 118.6 121 48.8
Rhsim07G0114100 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.4e-24 116.3 119 52.9
Rhsim05G0025300 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.3e-22 110.5 121 47.9
Rhsim07G0112200 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-21 107.1 82 69.5
Rhsim05G0036000 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.4e-21 106.3 138 43.5
Rhsim05G0034100 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.7e-20 102.8 105 50.5
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 7.3e-18 94.7 147 41.5
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.8e-17 92.8 150 38.7
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.8e-17 92.0 148 39.2
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.4e-16 90.5 170 36.5
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.1e-16 89.4 145 40.0
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 1.2e-15 87.4 173 34.7
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.6e-15 86.3 169 34.9
Rhsim07G0114700 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.3e-14 84.0 83 56.6
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 2.2e-14 83.2 136 38.2
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 4.2e-13 79.0 142 39.4
Rhsim07G0113400 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.4e-13 78.6 87 52.9
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 7.1e-13 78.2 118 39.8
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 1.2e-12 77.4 146 34.2
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 2.1e-12 76.6 127 38.6
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 2.1e-12 76.6 164 35.4
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 7.9e-12 74.7 143 34.3
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 2.5e-10 69.7 172 32.0
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 4.3e-10 68.9 172 31.4
Rhsim07G0113900 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.4e-10 68.2 76 48.7
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 1.3e-09 67.4 131 30.5
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 2.1e-09 66.6 170 31.2
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 1.4e-08 63.9 125 34.4
Rhsim07G0115000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-08 63.9 90 37.8
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 5.3e-08 62.0 121 32.2
Lsat_1_v5_gn_9_77681 Lactuca sativa HOM05D008848 ORTHO05D008136 6.9e-08 61.6 111 33.3
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 2.0e-07 60.1 115 34.8
Manes.17G056250 Manihot esculenta HOM05D008848 ORTHO05D008136 1.3e-06 57.4 76 38.2
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 2.2e-06 56.6 115 33.9
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 2.9e-06 56.2 94 39.4
Nitab4.5_0003050g0040 Nicotiana tabacum HOM05D008848 ORTHO05D008136 2.9e-06 56.2 88 36.4
Medtr8g028355 Medicago truncatula HOM05D008683 ORTHO05D010884 4.9e-06 55.5 124 34.7
Actinidia31512 Actinidia chinensis HOM05D008848 ORTHO05D008136 8.4e-06 54.7 135 31.9


User provided reference genes

Program Settings