Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 9.8e-95 350.1 178 100.0
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.5e-71 273.1 180 82.8
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.1e-69 266.9 182 80.8
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.0e-67 258.8 172 80.2
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 6.2e-65 251.1 172 80.2
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.9e-62 242.3 167 79.0
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.6e-60 236.5 133 91.7
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 5.4e-53 211.5 140 77.9
Rhsim07G0112100 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.1e-42 177.2 103 91.3
Rhsim07G0111600 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.0e-35 154.1 100 82.0
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-21 107.1 176 38.6
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 7.2e-21 104.8 148 43.2
Actinidia31512 Actinidia chinensis HOM05D008848 ORTHO05D008136 6.1e-20 101.7 146 47.3
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 7.9e-20 101.3 154 42.2
QL07p012914 Quercus lobata HOM05D008848 ORTHO05D008136 5.1e-19 98.6 148 39.9
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 5.1e-19 98.6 146 41.8
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 5.1e-19 98.6 153 39.9
QL07p012771 Quercus lobata HOM05D008848 ORTHO05D008136 1.1e-18 97.4 142 40.1
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 3.3e-18 95.9 126 42.9
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 1.3e-17 94.0 116 44.0
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 1.7e-17 93.6 131 43.5
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.8e-17 92.8 148 40.5
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 4.8e-17 92.0 152 39.5
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 6.3e-17 91.7 149 38.3
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 1.4e-16 90.5 107 43.9
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 4.1e-16 89.0 149 38.9
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 5.3e-16 88.6 101 49.5
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.9e-16 88.2 148 39.2
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 9.1e-16 87.8 163 39.9
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 9.1e-16 87.8 159 37.7
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 1.2e-15 87.4 155 34.8
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.5e-15 87.0 172 39.5
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 2.0e-15 86.7 100 45.0
Oeu034457.1 Olea europaea HOM05D009287 ORTHO05D008136 3.4e-15 85.9 114 46.5
Oeu020784.1 Olea europaea HOM05D009287 ORTHO05D008136 5.9e-15 85.1 107 49.5
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.7e-15 84.7 153 39.9
Oeu020786.1 Olea europaea HOM05D009287 ORTHO05D008136 1.0e-14 84.3 116 45.7
Oeu036307.1 Olea europaea HOM05D009287 ORTHO05D008136 1.0e-14 84.3 111 45.9
Oeu020785.1 Olea europaea HOM05D009287 ORTHO05D008136 1.7e-14 83.6 129 44.2
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 5.0e-14 82.0 132 34.1
FvH4_3g38201 Fragaria vesca HOM05D015530 ORTHO05D008136 8.5e-14 81.3 114 40.4
FAN21G0420 Fragaria x ananassa HOM05D015530 ORTHO05D008136 1.1e-13 80.9 114 39.5
Prupe.2G180200 Prunus persica HOM05D015530 ORTHO05D008136 1.1e-13 80.9 109 43.1
Rhsim07G0114400 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.9e-13 80.1 122 43.4
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 2.5e-13 79.7 144 38.9
Prupe.2G180000 Prunus persica HOM05D015530 ORTHO05D008136 2.5e-13 79.7 113 41.6
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 3.2e-13 79.3 120 41.7
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 3.2e-13 79.3 122 42.6
Oeu020787.1 Olea europaea HOM05D009287 ORTHO05D008136 4.2e-13 79.0 127 43.3
Peaxi162Scf00102g00938 Petunia axillaris HOM05D008848 ORTHO05D008136 1.6e-12 77.0 128 40.6
GSVIVG01001261001 Vitis vinifera HOM05D008848 ORTHO05D008136 1.6e-12 77.0 114 41.2
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 2.7e-12 76.3 187 35.8
Oeu020788.1 Olea europaea HOM05D009287 ORTHO05D008136 3.6e-12 75.9 126 40.5
Oeu018043.1 Olea europaea HOM05D009287 ORTHO05D008136 8.0e-12 74.7 110 43.6
GSVIVG01019271001 Vitis vinifera HOM05D008848 ORTHO05D008136 8.0e-12 74.7 130 34.6
Rhsim01G0128400 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.0e-11 74.3 122 40.2
FAN06G4503 Fragaria x ananassa HOM05D015530 ORTHO05D008136 1.4e-11 73.9 118 38.1
Glyma.18G222000 Glycine max HOM05D028937 ORTHO05D008136 1.4e-11 73.9 105 38.1
Rhsim07G0113500 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-11 73.9 122 41.8
Rhsim07G0114100 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.8e-11 73.6 122 41.8
Rhsim07G0114200 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.8e-11 73.6 122 41.8
Lsat_1_v5_gn_9_77681 Lactuca sativa HOM05D008848 ORTHO05D008136 2.3e-11 73.2 134 35.1
Medtr7g075160 Medicago truncatula HOM05D028937 ORTHO05D008136 2.3e-11 73.2 114 36.8
Oeu015942.1 Olea europaea HOM05D009287 ORTHO05D008136 2.3e-11 73.2 112 43.8
Sabra14G0045000 Salix brachista HOM05D010926 ORTHO05D011735 3.0e-11 72.8 124 33.1
Rhsim07G0112900 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.9e-11 72.4 113 43.4
Ciclev10006601m.g Citrus clementina HOM05D010926 ORTHO05D011735 5.2e-11 72.0 114 34.2
Prupe.2G180300 Prunus persica HOM05D015530 ORTHO05D008136 6.7e-11 71.6 120 39.2
MD07G1115400 Malus domestica HOM05D010926 ORTHO05D011735 8.8e-11 71.2 97 43.3
Prupe.2G143000 Prunus persica HOM05D012558 ORTHO05D012876 8.8e-11 71.2 135 37.8
Rhsim07G0114500 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.8e-11 71.2 109 41.3
Oeu015938.1 Olea europaea HOM05D009287 ORTHO05D008136 1.1e-10 70.9 113 44.2
FAN06G1921 Fragaria x ananassa HOM05D033618 ORTHO05D008136 1.5e-10 70.5 143 34.3
Phvul.008G075150 Phaseolus vulgaris HOM05D028937 ORTHO05D008136 1.5e-10 70.5 105 38.1
Ciclev10006726m.g Citrus clementina HOM05D010926 ORTHO05D011735 2.0e-10 70.1 131 29.8
PGSC0003DMG400044591 Solanum tuberosum HOM05D008848 ORTHO05D008136 2.0e-10 70.1 107 39.3
FAN06G2646 Fragaria x ananassa HOM05D006804 ORTHO05D012876 3.3e-10 69.3 125 32.0
FAN06G2981 Fragaria x ananassa HOM05D006804 ORTHO05D012876 3.3e-10 69.3 125 32.0
FAN11G2821 Fragaria x ananassa HOM05D015530 ORTHO05D008136 3.3e-10 69.3 84 45.2
Hma1.2p1_0316F.1_g122780 Hydrangea macrophylla HOM05D010926 ORTHO05D008136 3.3e-10 69.3 105 37.1
Sabra14G0045700 Salix brachista HOM05D010926 ORTHO05D011735 3.3e-10 69.3 121 33.1
Potri.001G135925 Populus trichocarpa HOM05D010926 ORTHO05D011735 4.4e-10 68.9 141 29.1
Potri.014G061133 Populus trichocarpa HOM05D010926 ORTHO05D011735 4.4e-10 68.9 141 29.1
Potri.014G061266 Populus trichocarpa HOM05D010926 ORTHO05D011735 4.4e-10 68.9 141 29.1
Rhsim07G0031400 Rhododendron simsii HOM05D010926 ORTHO05D011735 4.4e-10 68.9 127 35.4
FvH4_7g15661 Fragaria vesca HOM05D033618 ORTHO05D008136 5.7e-10 68.6 120 37.5
FAN03G2804 Fragaria x ananassa HOM05D012558 ORTHO05D012876 5.7e-10 68.6 125 31.2
Glyma.09G267900 Glycine max HOM05D028937 ORTHO05D008136 5.7e-10 68.6 102 39.2
Medtr8g028365 Medicago truncatula HOM05D008683 ORTHO05D010884 5.7e-10 68.6 92 43.5
Oeu026046.1 Olea europaea HOM05D009287 ORTHO05D008136 5.7e-10 68.6 111 42.3
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.7e-10 68.6 119 37.0
FAN06G1149 Fragaria x ananassa HOM05D027471 ORTHO05D012876 7.4e-10 68.2 129 31.8
PGSC0003DMG400026268 Solanum tuberosum HOM05D008848 ORTHO05D008136 9.7e-10 67.8 190 27.9
MD02G1210800 Malus domestica HOM05D010926 ORTHO05D011735 1.7e-09 67.0 102 43.1
Rhsim05G0036000 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.8e-09 66.2 138 33.3
DCAR_002190 Daucus carota HOM05D020340 ORTHO05D008136 3.7e-09 65.9 154 32.5
Dinv06361 Davidia involucrata HOM05D028634 ORTHO05D022500 3.7e-09 65.9 117 36.8
Rhsim05G0025300 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.7e-09 65.9 106 38.7
Ciclev10007031m.g Citrus clementina HOM05D010926 ORTHO05D011735 4.8e-09 65.5 83 34.9
Prupe.2G143100 Prunus persica HOM05D012558 ORTHO05D012876 4.8e-09 65.5 124 36.3
Oeu034177.1 Olea europaea HOM05D009287 ORTHO05D008136 6.3e-09 65.1 105 41.9
FAN01G0086 Fragaria x ananassa HOM05D027471 ORTHO05D012876 1.1e-08 64.3 129 31.0
Oeu026050.1 Olea europaea HOM05D009287 ORTHO05D008136 1.1e-08 64.3 113 39.8
Peaxi162Scf01083g00013 Petunia axillaris HOM05D008848 ORTHO05D008136 1.1e-08 64.3 159 30.8
Prupe.2G137400 Prunus persica HOM05D010926 ORTHO05D011735 1.4e-08 63.9 115 38.3
QL04p038305 Quercus lobata HOM05D010926 ORTHO05D011735 1.4e-08 63.9 149 31.5
FAN06G4246 Fragaria x ananassa HOM05D027471 ORTHO05D012876 1.8e-08 63.5 129 30.2
Glyma.07G061700 Glycine max HOM05D008683 ORTHO05D010884 2.4e-08 63.2 108 36.1
Glyma.07G061900 Glycine max HOM05D008683 ORTHO05D010884 2.4e-08 63.2 108 36.1
Medtr8g028300 Medicago truncatula HOM05D008683 ORTHO05D010884 2.4e-08 63.2 164 32.3
Phvul.010G103600 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 2.4e-08 63.2 117 34.2
Psat0s780g0080 Pisum sativum HOM05D008683 ORTHO05D010884 4.1e-08 62.4 155 32.3
Eucgr.D00561 Eucalyptus grandis HOM05D008848 ORTHO05D008136 5.3e-08 62.0 107 39.3
Manes.17G056250 Manihot esculenta HOM05D008848 ORTHO05D008136 5.3e-08 62.0 94 37.2
Phvul.010G072200 Phaseolus vulgaris HOM05D017052 ORTHO05D011735 5.3e-08 62.0 99 37.4
Phvul.010G103650 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 5.3e-08 62.0 117 33.3
Psat4g213640 Pisum sativum HOM05D008683 ORTHO05D010884 5.3e-08 62.0 99 38.4
TPR.G18156 Trifolium pratense HOM05D008683 ORTHO05D010884 5.3e-08 62.0 115 33.9
DCAR_006844 Daucus carota HOM05D020340 ORTHO05D008136 7.0e-08 61.6 120 35.8
Glyma.07G062000 Glycine max HOM05D008683 ORTHO05D010884 9.1e-08 61.2 110 33.6
Medtr4g027195 Medicago truncatula HOM05D017052 ORTHO05D011735 9.1e-08 61.2 113 31.0
Oeu010648.1 Olea europaea HOM05D009287 ORTHO05D008136 9.1e-08 61.2 104 38.5
Medtr8g028360 Medicago truncatula HOM05D008683 ORTHO05D010884 1.6e-07 60.5 166 30.7
Psat1g148400 Pisum sativum HOM05D008683 ORTHO05D010884 1.6e-07 60.5 150 29.3
Lalb_Chr07g0190261 Lupinus albus HOM05D017052 ORTHO05D011735 2.6e-07 59.7 99 33.3
Phvul.010G103450 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 2.6e-07 59.7 117 32.5
Phvul.010G103500 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 2.6e-07 59.7 117 32.5
Medtr8g028315 Medicago truncatula HOM05D008683 ORTHO05D010884 3.5e-07 59.3 143 32.9
DCAR_002189 Daucus carota HOM05D000455 ORTHO05D000434 4.5e-07 58.9 100 34.0
QL04p038362 Quercus lobata HOM05D010926 ORTHO05D011735 4.5e-07 58.9 117 34.2
PGSC0003DMG400033155 Solanum tuberosum HOM05D008848 ORTHO05D008136 4.5e-07 58.9 105 38.1
Glyma.07G066200 Glycine max HOM05D008683 ORTHO05D010884 7.7e-07 58.2 106 31.1
Medtr8g028350 Medicago truncatula HOM05D008683 ORTHO05D010884 7.7e-07 58.2 137 28.5
TPR.G22850 Trifolium pratense HOM05D008683 ORTHO05D010884 7.7e-07 58.2 169 30.2
Medtr8g028355 Medicago truncatula HOM05D008683 ORTHO05D010884 1.0e-06 57.8 120 34.2
Prupe.2G142700 Prunus persica HOM05D012558 ORTHO05D012876 1.0e-06 57.8 118 33.9
Prupe.2G180100 Prunus persica HOM05D015530 ORTHO05D008136 1.0e-06 57.8 92 39.1
DCAR_030935 Daucus carota HOM05D020340 ORTHO05D008136 1.3e-06 57.4 120 32.5
Dinv06358 Davidia involucrata HOM05D028634 ORTHO05D022500 1.3e-06 57.4 119 35.3
Medtr7g086850 Medicago truncatula HOM05D008683 ORTHO05D010884 1.3e-06 57.4 85 40.0
FAN03G1599 Fragaria x ananassa HOM05D012558 ORTHO05D012876 1.7e-06 57.0 130 31.5
Nitab4.5_0000190g0220 Nicotiana tabacum HOM05D008848 ORTHO05D049370 1.7e-06 57.0 120 30.8
Nitab4.5_0003050g0040 Nicotiana tabacum HOM05D008848 ORTHO05D008136 1.7e-06 57.0 83 38.6
Prupe.2G076600 Prunus persica HOM05D012558 ORTHO05D012876 1.7e-06 57.0 91 39.6
TPR.G22846 Trifolium pratense HOM05D008683 ORTHO05D010884 1.7e-06 57.0 178 28.1
Medtr8g028275 Medicago truncatula HOM05D008683 ORTHO05D010884 2.2e-06 56.6 123 30.9
Rhsim05G0034100 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.2e-06 56.6 96 38.5
FAN01G2192 Fragaria x ananassa HOM05D012558 ORTHO05D012876 2.9e-06 56.2 130 32.3
FAN06G0499 Fragaria x ananassa HOM05D012558 ORTHO05D012876 2.9e-06 56.2 133 32.3
Glyma.07G065900 Glycine max HOM05D008683 ORTHO05D010884 3.8e-06 55.8 87 35.6
FAN01G1700 Fragaria x ananassa HOM05D012558 ORTHO05D012876 5.0e-06 55.5 117 30.8
Actinidia12677 Actinidia chinensis HOM05D027244 ORTHO05D026415 6.5e-06 55.1 129 29.5
Glyma.01G135800 Glycine max HOM05D017052 ORTHO05D011735 6.5e-06 55.1 84 31.0
TPR.G18157 Trifolium pratense HOM05D008683 ORTHO05D010884 6.5e-06 55.1 83 38.6
FAN01G1745 Fragaria x ananassa HOM05D012558 ORTHO05D012876 8.5e-06 54.7 155 29.7
QL11p043863 Quercus lobata HOM05D028634 ORTHO05D022500 8.5e-06 54.7 124 27.4
Sabra13G0031000 Salix brachista HOM05D008789 ORTHO05D010785 8.5e-06 54.7 135 30.4


User provided reference genes

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