Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.2e-88 328.9 171 100.0
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.5e-79 299.7 170 90.6
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.3e-71 271.9 171 83.0
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 6.8e-69 264.2 172 79.7
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 6.4e-67 257.7 167 85.0
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.2e-65 253.4 172 80.2
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.9e-55 219.5 131 84.7
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.5e-47 192.6 125 80.0
Rhsim07G0111600 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.3e-39 165.2 94 90.4
Rhsim07G0112100 Rhododendron simsii HOM05D008848 ORTHO05D008136 6.6e-32 141.4 95 80.0
Actinidia31512 Actinidia chinensis HOM05D008848 ORTHO05D008136 3.3e-23 112.5 167 46.1
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 1.1e-21 107.5 138 44.2
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 5.8e-20 101.7 129 45.0
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 5.8e-20 101.7 129 45.0
QL07p012914 Quercus lobata HOM05D008848 ORTHO05D008136 6.5e-19 98.2 103 47.6
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 8.4e-19 97.8 136 41.9
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 8.4e-19 97.8 173 38.7
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.1e-18 97.4 148 37.8
QL07p012771 Quercus lobata HOM05D008848 ORTHO05D008136 2.5e-18 96.3 103 47.6
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 3.2e-18 95.9 130 44.6
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 5.5e-18 95.1 152 38.8
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 5.5e-18 95.1 152 37.5
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.5e-18 95.1 144 41.0
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 1.2e-17 94.0 157 36.3
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 1.6e-17 93.6 144 40.3
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 3.5e-17 92.4 101 51.5
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 3.5e-17 92.4 151 37.7
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 6.0e-17 91.7 123 43.1
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.0e-16 90.9 150 38.7
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 1.3e-16 90.5 107 43.9
Prupe.2G180200 Prunus persica HOM05D015530 ORTHO05D008136 8.7e-16 87.8 158 38.6
Prupe.2G180000 Prunus persica HOM05D015530 ORTHO05D008136 2.5e-15 86.3 151 40.4
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 4.3e-15 85.5 112 43.8
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 5.7e-15 85.1 118 44.1
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 1.6e-14 83.6 162 37.7
Oeu034457.1 Olea europaea HOM05D009287 ORTHO05D008136 2.8e-14 82.8 129 44.2
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 3.7e-14 82.4 143 34.3
Oeu020785.1 Olea europaea HOM05D009287 ORTHO05D008136 4.8e-14 82.0 131 43.5
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.8e-14 82.0 144 37.5
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 8.2e-14 81.3 129 40.3
FAN06G1921 Fragaria x ananassa HOM05D033618 ORTHO05D008136 8.2e-14 81.3 156 37.8
Oeu020786.1 Olea europaea HOM05D009287 ORTHO05D008136 8.2e-14 81.3 116 45.7
Oeu036307.1 Olea europaea HOM05D009287 ORTHO05D008136 1.1e-13 80.9 144 37.5
Rhsim07G0114400 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-13 80.5 128 39.8
Glyma.18G222000 Glycine max HOM05D028937 ORTHO05D008136 1.8e-13 80.1 101 41.6
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.8e-13 80.1 144 36.1
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.8e-13 80.1 128 39.8
Oeu020784.1 Olea europaea HOM05D009287 ORTHO05D008136 2.4e-13 79.7 130 43.8
Rhsim07G0113500 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.4e-13 79.7 130 40.8
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 4.1e-13 79.0 128 39.1
GSVIVG01019271001 Vitis vinifera HOM05D008848 ORTHO05D008136 6.9e-13 78.2 169 30.8
Oeu020787.1 Olea europaea HOM05D009287 ORTHO05D008136 1.2e-12 77.4 129 42.6
GSVIVG01001261001 Vitis vinifera HOM05D008848 ORTHO05D008136 1.2e-12 77.4 120 40.8
Medtr7g075160 Medicago truncatula HOM05D028937 ORTHO05D008136 1.5e-12 77.0 112 37.5
Oeu020788.1 Olea europaea HOM05D009287 ORTHO05D008136 1.5e-12 77.0 128 40.6
Ciclev10006601m.g Citrus clementina HOM05D010926 ORTHO05D011735 2.0e-12 76.6 103 37.9
FvH4_3g38201 Fragaria vesca HOM05D015530 ORTHO05D008136 2.0e-12 76.6 114 39.5
Peaxi162Scf00102g00938 Petunia axillaris HOM05D008848 ORTHO05D008136 2.0e-12 76.6 106 41.5
FAN21G0420 Fragaria x ananassa HOM05D015530 ORTHO05D008136 2.6e-12 76.3 114 38.6
Rhsim07G0114200 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.5e-12 75.5 132 37.9
Lsat_1_v5_gn_9_77681 Lactuca sativa HOM05D008848 ORTHO05D008136 5.8e-12 75.1 138 34.8
FvH4_7g15661 Fragaria vesca HOM05D033618 ORTHO05D008136 7.6e-12 74.7 126 42.1
FAN06G4503 Fragaria x ananassa HOM05D015530 ORTHO05D008136 7.6e-12 74.7 118 39.8
Phvul.008G075150 Phaseolus vulgaris HOM05D028937 ORTHO05D008136 7.6e-12 74.7 114 37.7
Prupe.2G180300 Prunus persica HOM05D015530 ORTHO05D008136 7.6e-12 74.7 101 42.6
Rhsim01G0128400 Rhododendron simsii HOM05D009466 ORTHO05D008136 7.6e-12 74.7 128 36.7
Ciclev10006726m.g Citrus clementina HOM05D010926 ORTHO05D011735 1.0e-11 74.3 128 34.4
Peaxi162Scf01083g00013 Petunia axillaris HOM05D008848 ORTHO05D008136 1.3e-11 73.9 162 31.5
Glyma.09G267900 Glycine max HOM05D028937 ORTHO05D008136 1.7e-11 73.6 95 42.1
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.7e-11 73.6 116 38.8
Rhsim05G0036000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.7e-11 73.6 120 39.2
PGSC0003DMG400044591 Solanum tuberosum HOM05D008848 ORTHO05D008136 1.7e-11 73.6 107 39.3
Rhsim05G0025300 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.2e-11 73.2 103 41.7
Rhsim07G0114100 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.2e-11 73.2 128 39.1
Oeu018043.1 Olea europaea HOM05D009287 ORTHO05D008136 5.0e-11 72.0 161 36.0
Rhsim07G0112900 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.0e-11 72.0 118 38.1
Rhsim07G0114500 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.4e-10 70.5 116 38.8
Oeu015942.1 Olea europaea HOM05D009287 ORTHO05D008136 1.9e-10 70.1 123 41.5
Medtr8g028350 Medicago truncatula HOM05D008683 ORTHO05D010884 4.2e-10 68.9 109 35.8
Medtr8g028300 Medicago truncatula HOM05D008683 ORTHO05D010884 7.1e-10 68.2 163 33.1
Oeu026046.1 Olea europaea HOM05D009287 ORTHO05D008136 7.1e-10 68.2 161 34.2
Psat4g213640 Pisum sativum HOM05D008683 ORTHO05D010884 7.1e-10 68.2 99 43.4
Potri.014G061133 Populus trichocarpa HOM05D010926 ORTHO05D011735 7.1e-10 68.2 127 31.5
Prupe.2G143000 Prunus persica HOM05D012558 ORTHO05D012876 7.1e-10 68.2 106 40.6
Sabra14G0045000 Salix brachista HOM05D010926 ORTHO05D011735 7.1e-10 68.2 124 31.5
Phvul.010G103600 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.2e-09 67.4 117 35.9
TPR.G18156 Trifolium pratense HOM05D008683 ORTHO05D010884 1.2e-09 67.4 108 37.0
DCAR_002190 Daucus carota HOM05D020340 ORTHO05D008136 1.6e-09 67.0 151 31.8
Oeu015938.1 Olea europaea HOM05D009287 ORTHO05D008136 1.6e-09 67.0 113 43.4
FAN06G2646 Fragaria x ananassa HOM05D006804 ORTHO05D012876 2.1e-09 66.6 122 32.0
FAN06G2981 Fragaria x ananassa HOM05D006804 ORTHO05D012876 2.1e-09 66.6 122 32.0
Medtr8g028360 Medicago truncatula HOM05D008683 ORTHO05D010884 2.1e-09 66.6 121 37.2
Phvul.010G103650 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 2.1e-09 66.6 117 35.0
PGSC0003DMG400033155 Solanum tuberosum HOM05D008848 ORTHO05D008136 2.1e-09 66.6 147 36.1
FAN06G1149 Fragaria x ananassa HOM05D027471 ORTHO05D012876 2.7e-09 66.2 104 38.5
Glyma.07G066200 Glycine max HOM05D008683 ORTHO05D010884 2.7e-09 66.2 115 36.5
Potri.001G135925 Populus trichocarpa HOM05D010926 ORTHO05D011735 2.7e-09 66.2 127 31.5
Potri.014G061266 Populus trichocarpa HOM05D010926 ORTHO05D011735 2.7e-09 66.2 127 31.5
PGSC0003DMG400026268 Solanum tuberosum HOM05D008848 ORTHO05D008136 2.7e-09 66.2 142 33.8
Prupe.2G180100 Prunus persica HOM05D015530 ORTHO05D008136 3.5e-09 65.9 104 38.5
QL04p038305 Quercus lobata HOM05D010926 ORTHO05D011735 3.5e-09 65.9 118 33.9
Dinv06361 Davidia involucrata HOM05D028634 ORTHO05D022500 4.6e-09 65.5 130 34.6
Glyma.07G061700 Glycine max HOM05D008683 ORTHO05D010884 4.6e-09 65.5 104 41.3
Glyma.07G061900 Glycine max HOM05D008683 ORTHO05D010884 4.6e-09 65.5 104 41.3
Hma1.2p1_0316F.1_g122780 Hydrangea macrophylla HOM05D010926 ORTHO05D008136 4.6e-09 65.5 86 41.9
DCAR_006844 Daucus carota HOM05D020340 ORTHO05D008136 6.1e-09 65.1 119 35.3
FAN03G2804 Fragaria x ananassa HOM05D012558 ORTHO05D012876 6.1e-09 65.1 119 31.9
Medtr7g086850 Medicago truncatula HOM05D008683 ORTHO05D010884 7.9e-09 64.7 117 35.0
Rhsim07G0031400 Rhododendron simsii HOM05D010926 ORTHO05D011735 7.9e-09 64.7 140 32.9
Medtr8g028365 Medicago truncatula HOM05D008683 ORTHO05D010884 1.0e-08 64.3 137 35.0
Psat1g148400 Pisum sativum HOM05D008683 ORTHO05D010884 1.0e-08 64.3 148 31.1
Oeu026050.1 Olea europaea HOM05D009287 ORTHO05D008136 1.3e-08 63.9 157 33.1
Phvul.010G103450 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.3e-08 63.9 117 34.2
Phvul.010G103500 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 1.3e-08 63.9 117 34.2
Nitab4.5_0003050g0040 Nicotiana tabacum HOM05D008848 ORTHO05D008136 1.8e-08 63.5 86 37.2
Rhsim05G0034100 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.8e-08 63.5 96 40.6
Sabra14G0045700 Salix brachista HOM05D010926 ORTHO05D011735 1.8e-08 63.5 123 32.5
TPR.G22850 Trifolium pratense HOM05D008683 ORTHO05D010884 2.3e-08 63.2 136 33.8
Medtr8g028355 Medicago truncatula HOM05D008683 ORTHO05D010884 3.0e-08 62.8 129 34.9
MD07G1115400 Malus domestica HOM05D010926 ORTHO05D011735 3.9e-08 62.4 103 41.7
Medtr8g028315 Medicago truncatula HOM05D008683 ORTHO05D010884 3.9e-08 62.4 139 29.5
Prupe.2G143100 Prunus persica HOM05D012558 ORTHO05D012876 3.9e-08 62.4 102 35.3
Rhsim07G0113900 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.9e-08 62.4 100 43.0
Actinidia12677 Actinidia chinensis HOM05D027244 ORTHO05D026415 5.1e-08 62.0 105 33.3
FAN01G0086 Fragaria x ananassa HOM05D027471 ORTHO05D012876 5.1e-08 62.0 104 37.5
FAN11G2821 Fragaria x ananassa HOM05D015530 ORTHO05D008136 5.1e-08 62.0 84 42.9
Oeu010648.1 Olea europaea HOM05D009287 ORTHO05D008136 5.1e-08 62.0 152 32.2
Psat0s780g0080 Pisum sativum HOM05D008683 ORTHO05D010884 5.1e-08 62.0 173 28.3
QL04p038362 Quercus lobata HOM05D010926 ORTHO05D011735 6.7e-08 61.6 86 40.7
FAN06G4246 Fragaria x ananassa HOM05D027471 ORTHO05D012876 8.7e-08 61.2 104 36.5
Phvul.010G072200 Phaseolus vulgaris HOM05D017052 ORTHO05D011735 8.7e-08 61.2 97 38.1
TPR.G18157 Trifolium pratense HOM05D008683 ORTHO05D010884 8.7e-08 61.2 87 39.1
Glyma.07G062000 Glycine max HOM05D008683 ORTHO05D010884 1.5e-07 60.5 112 33.0
MD02G1210800 Malus domestica HOM05D010926 ORTHO05D011735 1.5e-07 60.5 103 42.7
Medtr4g027195 Medicago truncatula HOM05D017052 ORTHO05D011735 1.5e-07 60.5 87 34.5
Oeu034177.1 Olea europaea HOM05D009287 ORTHO05D008136 1.9e-07 60.1 104 41.3
Peaxi162Scf00214g00011 Petunia axillaris HOM05D008848 ORTHO05D008136 1.9e-07 60.1 86 44.2
FAN06G4280 Fragaria x ananassa HOM05D033618 ORTHO05D008136 3.3e-07 59.3 95 43.2
Prupe.2G076600 Prunus persica HOM05D012558 ORTHO05D012876 3.3e-07 59.3 91 39.6
Ciclev10007031m.g Citrus clementina HOM05D010926 ORTHO05D011735 4.3e-07 58.9 83 33.7
DCAR_030931 Daucus carota HOM05D020340 ORTHO05D008136 4.3e-07 58.9 156 31.4
Eucgr.D00561 Eucalyptus grandis HOM05D008848 ORTHO05D008136 4.3e-07 58.9 107 38.3
TPR.G22846 Trifolium pratense HOM05D008683 ORTHO05D010884 4.3e-07 58.9 130 32.3
VMungo0331G0622 Vigna mungo HOM05D008683 ORTHO05D010884 5.7e-07 58.5 138 27.5
VMungo1114G0001 Vigna mungo HOM05D008683 ORTHO05D010884 5.7e-07 58.5 119 34.5
Lalb_Chr07g0190261 Lupinus albus HOM05D017052 ORTHO05D011735 7.4e-07 58.2 99 31.3
Sabra13G0031000 Salix brachista HOM05D008789 ORTHO05D010785 7.4e-07 58.2 125 32.0
DCAR_002189 Daucus carota HOM05D000455 ORTHO05D000434 9.7e-07 57.8 123 30.9
DCAR_030935 Daucus carota HOM05D020340 ORTHO05D008136 9.7e-07 57.8 128 30.5
Medtr4g027225 Medicago truncatula HOM05D017052 ORTHO05D011735 1.6e-06 57.0 132 31.1
Manes.17G056250 Manihot esculenta HOM05D008848 ORTHO05D008136 2.2e-06 56.6 81 40.7
FAN03G1599 Fragaria x ananassa HOM05D012558 ORTHO05D012876 2.8e-06 56.2 131 33.6
VMungo0331G0348 Vigna mungo HOM05D008683 ORTHO05D010884 2.8e-06 56.2 138 26.8
Glyma.07G065900 Glycine max HOM05D008683 ORTHO05D010884 3.7e-06 55.8 87 37.9
Prupe.2G137400 Prunus persica HOM05D010926 ORTHO05D011735 6.3e-06 55.1 115 34.8
Rhsim07G0113400 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.3e-06 55.1 84 39.3
Nitab4.5_0000190g0220 Nicotiana tabacum HOM05D008848 ORTHO05D049370 8.2e-06 54.7 123 30.1
Sopen06g020940 Solanum pennellii HOM05D008848 ORTHO05D008136 8.2e-06 54.7 68 44.1


User provided reference genes

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