Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 0.0e+00 1646.7 808 100.0
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 0.0e+00 1589.7 808 97.2
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 0.0e+00 1349.7 809 84.1
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 0.0e+00 1115.1 820 70.2
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 0.0e+00 1082.8 820 68.7
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 3.0e-300 1035.0 824 64.9
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 1.0e-284 983.4 813 63.0
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.1e-283 979.9 819 61.7
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 4.5e-280 968.0 810 61.5
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 3.8e-279 964.9 810 61.4
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 1.9e-278 962.6 818 60.9
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 9.4e-278 960.3 828 60.0
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 2.1e-277 959.1 809 60.4
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 5.2e-276 954.5 824 61.5
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 2.8e-274 948.7 818 60.5
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 5.3e-273 944.5 805 59.9
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 7.2e-270 934.1 826 58.6
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 1.2e-267 926.8 807 59.0
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 1.2e-267 926.8 816 58.9
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 3.4e-267 925.2 816 58.7
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 7.5e-267 924.1 818 59.8
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.3e-266 923.3 821 59.8
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 6.3e-266 921.0 861 57.6
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 4.1e-265 918.3 832 58.1
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 5.3e-265 917.9 822 57.3
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.7e-264 915.6 813 58.8
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 1.0e-263 913.7 815 59.8
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 1.0e-263 913.7 832 57.8
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.8e-263 911.8 826 59.6
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 8.5e-263 910.6 659 70.4
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 1.5e-262 909.8 654 70.3
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 3.6e-261 905.2 811 57.2
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 4.7e-261 904.8 832 56.2
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 3.0e-260 902.1 821 58.2
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 8.8e-260 900.6 812 58.4
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 5.7e-259 897.9 816 58.5
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 1.3e-258 896.7 830 57.0
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.9e-258 894.8 813 58.3
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 8.3e-258 894.0 813 58.5
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 4.1e-257 891.7 813 56.8
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 1.6e-256 889.8 834 56.8
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 2.0e-256 889.4 812 56.7
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 7.7e-256 887.5 819 57.8
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 1.0e-255 887.1 817 56.1
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.3e-255 886.7 813 58.3
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.3e-255 886.7 813 58.1
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 1.5e-254 883.2 820 56.8
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.6e-253 879.8 855 54.6
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 4.7e-253 878.2 813 57.1
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 8.0e-253 877.5 868 52.5
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 1.0e-252 877.1 815 56.6
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 5.4e-249 864.8 812 56.4
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 1.0e-247 860.5 820 56.2
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 1.1e-246 857.1 812 56.0
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 5.6e-246 854.7 816 56.4
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 6.1e-245 851.3 822 55.7
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 1.0e-244 850.5 829 54.9
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 2.3e-244 849.4 811 54.7
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 1.3e-242 843.6 833 53.3
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 3.2e-241 839.0 813 54.7
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 9.2e-241 837.4 803 55.0
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 1.6e-240 836.6 834 52.8
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 7.3e-238 827.8 817 53.4
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 4.7e-237 825.1 828 53.5
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 1.8e-236 823.2 820 52.8
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 2.3e-236 822.8 812 54.1
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 2.0e-235 819.7 819 53.4
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 4.4e-235 818.5 762 56.6
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 6.4e-234 814.7 818 52.8
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 1.4e-233 813.5 817 53.5
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 5.4e-233 811.6 819 53.5
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 4.6e-232 808.5 819 52.6
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 2.5e-230 802.7 821 51.5
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 1.2e-229 800.4 825 52.5
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 2.8e-229 799.3 817 52.5
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 1.8e-228 796.6 821 52.4
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 3.1e-228 795.8 819 51.5
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 4.1e-225 785.4 820 52.3
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 3.5e-224 782.3 822 51.3
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 2.3e-223 779.6 819 53.4
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 1.1e-222 777.3 822 52.1
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 2.8e-221 772.7 807 52.4
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.2e-219 767.3 776 53.1
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.4e-217 760.4 809 51.5
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 3.5e-216 755.7 810 52.0
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 5.1e-215 751.9 801 50.8
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 6.4e-202 708.4 822 47.3
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 6.0e-200 701.8 801 46.3
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 9.3e-193 677.9 605 59.2
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 4.6e-192 675.6 688 52.3
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 2.5e-190 669.8 810 47.9
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 5.3e-188 662.1 663 54.4
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.2e-168 597.8 816 47.4
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 6.7e-167 592.0 824 42.5
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 1.1e-161 574.7 625 50.7
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 6.1e-152 542.3 813 41.6
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 4.0e-127 459.9 815 37.1
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 1.7e-93 348.2 413 47.0
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 3.8e-93 347.1 872 32.0
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 7.6e-86 322.8 257 63.0
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 2.4e-84 317.8 251 67.3
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 9.3e-84 315.8 294 56.1
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 3.5e-83 313.9 287 57.1
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 6.0e-83 313.2 289 56.4
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 5.8e-78 296.6 865 28.7
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 1.9e-76 291.6 252 61.1
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.6e-67 260.8 266 53.0
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.1e-47 194.5 176 58.0
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 1.6e-43 182.2 206 48.5
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 8.8e-42 176.4 174 51.7
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 8.8e-42 176.4 211 47.4
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.1e-39 169.5 150 58.7
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-37 162.2 1030 21.9
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 8.0e-35 153.3 260 36.9
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 5.7e-33 147.1 87 78.2
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 1.4e-18 99.4 119 47.1
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 3.9e-13 81.3 166 32.5
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 9.5e-12 76.6 68 55.9
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.1e-10 73.2 50 70.0
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 5.2e-10 70.9 49 67.3
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 5.2e-10 70.9 50 64.0
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 2.6e-09 68.6 154 29.2


User provided reference genes

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