Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 8.3e-84 313.5 145 100.0
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 6.0e-66 254.2 146 80.1
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 3.6e-63 245.0 193 62.7
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 2.0e-61 239.2 144 76.4
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 2.0e-61 239.2 134 80.6
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 9.9e-61 236.9 147 74.1
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 3.7e-60 235.0 145 74.5
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 1.1e-59 233.4 143 74.8
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 4.1e-59 231.5 146 74.0
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 3.5e-58 228.4 145 71.0
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 4.6e-58 228.0 131 77.9
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 3.0e-57 225.3 147 72.1
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 1.9e-56 222.6 145 71.0
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 1.9e-56 222.6 143 69.9
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 2.5e-56 222.2 149 67.8
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 3.3e-56 221.9 145 73.8
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 4.3e-56 221.5 114 84.2
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 3.6e-55 218.4 145 69.7
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 8.1e-55 217.2 149 68.5
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 8.1e-55 217.2 147 69.4
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 3.1e-54 215.3 148 67.6
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 1.2e-53 213.4 147 67.3
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 1.5e-53 213.0 146 66.4
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 2.0e-53 212.6 145 68.3
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 5.8e-53 211.1 151 64.9
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 5.8e-53 211.1 104 84.6
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 5.8e-53 211.1 147 68.0
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 9.9e-53 210.3 147 63.9
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 9.9e-53 210.3 104 85.6
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 3.8e-52 208.4 148 65.5
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 4.9e-52 208.0 148 65.5
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 6.4e-52 207.6 151 64.2
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 8.4e-52 207.2 145 66.2
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.1e-51 206.8 148 64.9
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 1.9e-51 206.1 128 73.4
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 1.9e-51 206.1 104 81.7
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 2.4e-51 205.7 149 65.1
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 2.7e-50 202.2 147 64.6
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 3.5e-50 201.8 134 68.7
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 7.8e-50 200.7 126 68.3
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 1.0e-49 200.3 140 62.9
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 1.0e-49 200.3 104 79.8
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 1.0e-49 200.3 104 79.8
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 1.3e-49 199.9 150 62.7
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 1.7e-49 199.5 104 80.8
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 6.6e-49 197.6 148 58.8
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 6.6e-49 197.6 134 66.4
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 1.1e-48 196.8 135 65.2
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 1.1e-48 196.8 158 60.1
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 1.1e-48 196.8 143 64.3
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 1.5e-48 196.4 145 64.1
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 1.9e-48 196.1 144 66.0
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.5e-48 195.7 146 63.0
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 5.6e-48 194.5 106 76.4
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 4.7e-47 191.4 123 67.5
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 1.1e-46 190.3 91 89.0
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 2.4e-46 189.1 119 67.2
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 1.2e-45 186.8 118 68.6
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 1.7e-44 183.0 104 74.0
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.7e-44 183.0 106 71.7
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 1.9e-40 169.5 149 57.0
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 5.6e-40 167.9 104 68.3
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 6.2e-39 164.5 100 68.0
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 1.4e-38 163.3 88 78.4
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 9.3e-35 150.6 97 69.1
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 9.3e-35 150.6 76 82.9
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 9.3e-35 150.6 82 79.3
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 1.0e-33 147.1 77 79.2
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 5.8e-29 131.3 73 71.2
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 7.6e-29 131.0 73 71.2
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 3.9e-25 118.6 103 57.3
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 2.3e-17 92.8 51 72.5
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 2.8e-07 59.3 38 60.5
Medtr8g036830 Medicago truncatula HOM05D008019 ORTHO05D010184 4.8e-07 58.5 57 45.6
Lalb_Chr19g0132141 Lupinus albus HOM05D008019 ORTHO05D010184 1.4e-06 57.0 28 78.6


User provided reference genes

Program Settings