Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 5.8e-113 411.0 220 100.0
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 6.1e-54 214.9 137 85.4
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.4e-45 187.2 139 82.0
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 3.3e-44 182.6 137 75.2
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 7.5e-44 181.4 137 73.0
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 9.7e-44 181.0 137 73.0
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 2.2e-43 179.9 137 78.1
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 2.2e-43 179.9 133 75.2
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 3.7e-43 179.1 132 75.8
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 6.3e-43 178.3 133 74.4
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 2.4e-42 176.4 133 76.7
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.1e-42 176.0 137 70.1
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.1e-42 176.0 137 70.1
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 5.3e-42 175.3 133 72.9
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.2e-41 174.1 136 72.1
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 1.2e-41 174.1 128 77.3
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 2.0e-41 173.3 128 75.0
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 2.7e-41 172.9 132 72.7
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 2.7e-41 172.9 119 79.0
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 1.0e-40 171.0 132 75.0
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 1.0e-40 171.0 132 72.7
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.3e-40 170.6 133 66.9
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.7e-40 170.2 133 66.9
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.7e-40 170.2 130 73.1
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 2.2e-40 169.9 137 70.1
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 2.9e-40 169.5 137 70.1
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 3.8e-40 169.1 118 75.4
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 3.8e-40 169.1 116 76.7
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 6.5e-40 168.3 119 73.9
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 6.5e-40 168.3 137 69.3
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 6.5e-40 168.3 136 68.4
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 1.1e-39 167.5 116 75.9
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.1e-39 167.5 113 79.6
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 1.1e-39 167.5 134 71.6
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 1.1e-39 167.5 127 74.0
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 1.5e-39 167.2 130 71.5
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 1.5e-39 167.2 133 72.2
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 1.5e-39 167.2 127 73.2
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.9e-39 166.8 122 76.2
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 3.2e-39 166.0 136 68.4
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 5.5e-39 165.2 113 78.8
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 5.5e-39 165.2 123 71.5
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 7.2e-39 164.9 123 71.5
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 9.4e-39 164.5 130 70.0
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 9.4e-39 164.5 122 73.0
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 1.2e-38 164.1 137 68.6
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.6e-38 163.7 111 80.2
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 2.7e-38 162.9 118 75.4
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 4.7e-38 162.2 127 72.4
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 4.7e-38 162.2 127 72.4
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 4.7e-38 162.2 131 71.0
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 6.1e-38 161.8 130 68.5
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 8.0e-38 161.4 111 79.3
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 8.0e-38 161.4 113 76.1
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 1.0e-37 161.0 126 72.2
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.0e-37 161.0 138 67.4
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.0e-37 161.0 113 77.0
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 1.4e-37 160.6 122 73.0
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 1.8e-37 160.2 120 73.3
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 3.0e-37 159.5 116 77.6
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 5.2e-37 158.7 107 79.4
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 5.2e-37 158.7 109 78.9
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 5.2e-37 158.7 134 67.2
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 1.2e-36 157.5 112 77.7
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 1.2e-36 157.5 112 77.7
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 1.2e-36 157.5 129 70.5
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 1.2e-36 157.5 128 67.2
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 1.5e-36 157.1 113 74.3
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 1.5e-36 157.1 146 63.0
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 2.0e-36 156.8 113 75.2
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 2.6e-36 156.4 161 59.6
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 3.4e-36 156.0 114 74.6
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 4.4e-36 155.6 116 72.4
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 5.7e-36 155.2 112 75.9
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 5.7e-36 155.2 112 75.9
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 5.7e-36 155.2 112 75.9
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 9.8e-36 154.5 127 68.5
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.3e-35 154.1 114 73.7
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 2.2e-35 153.3 114 73.7
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 2.8e-35 152.9 113 73.5
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 8.3e-35 151.4 137 66.4
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 1.1e-34 151.0 116 71.6
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 1.8e-34 150.2 126 65.9
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 5.4e-34 148.7 134 65.7
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 7.0e-34 148.3 118 69.5
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 9.1e-34 147.9 137 65.7
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.2e-33 147.5 119 69.7
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 1.6e-33 147.1 133 61.7
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 3.5e-33 146.0 118 69.5
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 5.5e-31 138.7 122 64.8
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 3.6e-30 136.0 97 74.2
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 1.0e-29 134.4 118 59.3
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 3.0e-29 132.9 113 67.3
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 4.4e-28 129.0 124 62.9
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 2.8e-27 126.3 95 74.7
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 5.4e-26 122.1 127 63.0
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 7.0e-26 121.7 116 56.9
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 7.8e-25 118.2 113 60.2
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 7.8e-25 118.2 109 62.4
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 4.3e-23 112.5 73 80.8
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 8.0e-22 108.2 110 58.2
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 9.2e-18 94.7 94 61.7
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 9.2e-18 94.7 66 72.7
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 5.0e-16 89.0 109 45.9
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 5.0e-16 89.0 114 43.0
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-14 84.0 100 41.0
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 8.9e-13 78.2 51 82.4
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 1.7e-08 63.9 49 67.3
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 3.6e-06 56.2 68 50.0


User provided reference genes

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