Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0049900 Rhododendron simsii HOM05D008423 ORTHO05D010599 1.3e-67 259.6 131 100.0
Actinidia31712 Actinidia chinensis HOM05D008423 ORTHO05D010599 3.4e-36 155.2 132 62.9
vmacro13611 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 2.6e-28 129.0 94 74.5
Hma1.2p1_0505F.1_g168150 Hydrangea macrophylla HOM05D008423 ORTHO05D010599 4.9e-19 98.2 126 47.6
Nitab4.5_0000050g0280 Nicotiana tabacum HOM05D008423 ORTHO05D010599 4.2e-18 95.1 131 43.5
vmacro13610 Vaccinium macrocarpon HOM05D000806 ORTHO05D002320 1.6e-17 93.2 79 65.8
Potri.001G230200 Populus trichocarpa HOM05D008423 ORTHO05D010599 6.0e-17 91.3 119 47.1
MD02G1319200 Malus domestica HOM05D008423 ORTHO05D010599 8.7e-16 87.4 116 47.4
Peaxi162Scf00245g01314 Petunia axillaris HOM05D008423 ORTHO05D010599 1.9e-15 86.3 132 45.5
Manes.10G151900 Manihot esculenta HOM05D008423 ORTHO05D010599 2.5e-15 85.9 85 52.9
CANSAT11G0957 Cannabis sativa HOM05D008423 ORTHO05D010599 1.3e-14 83.6 114 44.7
QL04p001438 Quercus lobata HOM05D008423 ORTHO05D010599 1.3e-14 83.6 140 44.3
Nn7g36010 Nelumbo nucifera HOM05D008423 ORTHO05D010599 2.1e-14 82.8 122 42.6
Solyc10g045320.2 Solanum lycopersicum HOM05D008423 ORTHO05D010599 2.1e-14 82.8 131 42.0
Sopen10g014490 Solanum pennellii HOM05D008423 ORTHO05D010599 4.8e-14 81.6 130 40.8
Lj3g0025495 Lotus japonicus HOM05D008423 ORTHO05D010599 1.8e-13 79.7 120 46.7
Prupe.2G003000 Prunus persica HOM05D008423 ORTHO05D010599 1.8e-13 79.7 82 47.6
Migut.N01658 Erythranthe guttata HOM05D008423 ORTHO05D010599 6.9e-13 77.8 134 42.5
GSVIVG01001359001 Vitis vinifera HOM05D008423 ORTHO05D010599 6.9e-13 77.8 122 46.7
QL04p001302 Quercus lobata HOM05D008423 ORTHO05D010599 1.5e-12 76.6 136 43.4
RcHm_v2.0_Chr1g0313281 Rosa chinensis HOM05D008423 ORTHO05D010599 1.0e-11 73.9 72 52.8
MSTRG.28099 Avicennia marina HOM05D008423 ORTHO05D010599 1.3e-11 73.6 131 43.5
Lalb_Chr25g0283631 Lupinus albus HOM05D008423 ORTHO05D010599 1.7e-11 73.2 84 48.8
TPR.G16173 Trifolium pratense HOM05D008423 ORTHO05D010599 2.2e-11 72.8 89 46.1
PSO339G5978 Papaver somniferum HOM05D008423 ORTHO05D010599 3.8e-11 72.0 123 42.3
Phvul.005G041500 Phaseolus vulgaris HOM05D008423 ORTHO05D010599 5.0e-11 71.6 134 41.8
COL.COLO4_25062 Corchorus olitorius HOM05D008423 ORTHO05D010599 6.5e-11 71.2 109 40.4
VMungo1080G1057 Vigna mungo HOM05D008423 ORTHO05D010599 1.1e-10 70.5 96 46.9
SGA_v2.0_scaffold4G02233 Striga asiatica HOM05D008423 ORTHO05D010599 1.4e-10 70.1 137 41.6
PSO384G0182 Papaver somniferum HOM05D008423 ORTHO05D010599 1.9e-10 69.7 123 40.7
Aqoxy148s005 Aquilegia oxysepala HOM05D008423 ORTHO05D010599 2.5e-10 69.3 91 46.2
Glyma.08G157600 Glycine max HOM05D008423 ORTHO05D010599 4.2e-10 68.6 97 47.4
Psat1g127160 Pisum sativum HOM05D008423 ORTHO05D010599 4.2e-10 68.6 121 42.1
FAN01G1593 Fragaria x ananassa HOM05D008423 ORTHO05D010599 7.2e-10 67.8 111 37.8
Lsat_1_v5_gn_7_35900 Lactuca sativa HOM05D008423 ORTHO05D010599 7.2e-10 67.8 131 40.5
FAN03G2952 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.2e-09 67.0 111 37.8
Medtr2g061490 Medicago truncatula HOM05D008423 ORTHO05D010599 1.2e-09 67.0 97 43.3
Medtr2g061510 Medicago truncatula HOM05D008423 ORTHO05D010599 1.2e-09 67.0 97 43.3
FvH4_7g00090 Fragaria vesca HOM05D008423 ORTHO05D010599 2.1e-09 66.2 111 36.9
FAN06G2169 Fragaria x ananassa HOM05D008423 ORTHO05D010599 2.1e-09 66.2 111 36.9
Sed0026701 Sechium edule HOM05D008423 ORTHO05D010599 2.1e-09 66.2 116 40.5
ECA236G1240 Erigeron canadensis HOM05D008423 ORTHO05D010599 1.0e-08 63.9 126 37.3
Duzib114G0357 Durio zibethinus HOM05D008423 ORTHO05D010599 1.1e-07 60.5 73 43.8
TWI73G0904 Tripterygium wilfordii HOM05D008423 ORTHO05D010599 1.1e-07 60.5 82 42.7
SalBow4G0198 Salvia bowleyana HOM05D008423 ORTHO05D010599 1.9e-07 59.7 124 38.7
Ciclev10033102m.g Citrus clementina HOM05D008423 ORTHO05D010599 4.3e-07 58.5 91 44.0
Cc02_g26950 Coffea canephora HOM05D008423 ORTHO05D010599 4.3e-07 58.5 134 37.3
ClCG09G003740 Citrullus lanatus HOM05D008423 ORTHO05D010599 9.7e-07 57.4 86 43.0
HanXRQChr15g0480651 Helianthus annuus HOM05D008423 ORTHO05D010599 9.7e-07 57.4 127 36.2
CDE08G1651 Ceratophyllum demersum HOM05D000059 ORTHO05D010744 2.2e-06 56.2 115 35.7
Thecc.01G416500 Theobroma cacao HOM05D008423 ORTHO05D010599 3.7e-06 55.5 89 37.1


User provided reference genes

Program Settings