Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0046200 Rhododendron simsii HOM05D007511 ORTHO05D003753 1.5e-122 443.0 244 100.0
vmacro13587 Vaccinium macrocarpon HOM05D007511 ORTHO05D003753 1.7e-44 183.7 121 79.3
Rhsim01G0134200 Rhododendron simsii HOM05D007511 ORTHO05D003753 3.6e-31 139.4 123 61.8
Rhsim01G0134700 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.7e-31 139.0 124 61.3
CSS0038510 Camellia sinensis var. sinensis HOM05D007511 ORTHO05D003753 3.0e-25 119.8 126 54.0
SGA_v2.0_scaffold5G03086 Striga asiatica HOM05D007511 ORTHO05D003753 1.3e-17 94.4 107 43.9
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 8.6e-17 91.7 128 45.3
Migut.B01440 Erythranthe guttata HOM05D007511 ORTHO05D003753 4.3e-16 89.4 91 46.2
Hma1.2p1_0915F.1_g236420 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 9.5e-16 88.2 133 43.6
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 9.5e-16 88.2 127 41.7
Peaxi162Scf01343g00114 Petunia axillaris HOM05D007511 ORTHO05D003753 1.6e-15 87.4 122 43.4
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 6.2e-15 85.5 121 43.0
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 1.1e-14 84.7 126 40.5
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 3.1e-14 83.2 101 46.5
PGSC0003DMG400043768 Solanum tuberosum HOM05D007511 ORTHO05D003753 3.1e-14 83.2 107 44.9
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 4.0e-14 82.8 120 40.0
Sopen01g032800 Solanum pennellii HOM05D007511 ORTHO05D003753 6.8e-14 82.0 107 43.9
HanXRQChr04g0119711 Helianthus annuus HOM05D007511 ORTHO05D003753 8.9e-14 81.6 102 45.1
Sopen10g009620 Solanum pennellii HOM05D007511 ORTHO05D025904 8.9e-14 81.6 87 50.6
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 1.2e-13 81.3 126 38.9
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 1.2e-13 81.3 123 42.3
Nitab4.5_0004800g0110 Nicotiana tabacum HOM05D000001 ORTHO05D011953 1.5e-13 80.9 108 45.4
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 3.4e-13 79.7 131 38.2
Lsat_1_v5_gn_7_35641 Lactuca sativa HOM05D007511 ORTHO05D003753 5.8e-13 79.0 150 37.3
Solyc10g024480.1 Solanum lycopersicum HOM05D007511 ORTHO05D003753 5.8e-13 79.0 115 40.9
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 1.3e-12 77.8 129 34.1
Hma1.2p1_0353F.1_g133330 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 3.7e-12 76.3 108 41.7
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 4.9e-12 75.9 136 38.2
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 1.1e-11 74.7 129 33.3
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 2.4e-11 73.6 129 33.3
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 4.1e-11 72.8 136 39.0
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 9.2e-11 71.6 141 36.2
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 1.6e-10 70.9 134 31.3
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 1.6e-10 70.9 138 37.7
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 2.7e-10 70.1 138 37.7
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 1.0e-09 68.2 139 37.4
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 2.3e-09 67.0 131 35.9
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 5.1e-09 65.9 68 47.1
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 5.1e-09 65.9 132 36.4
Peaxi162Scf00245g00034 Petunia axillaris HOM05D030085 ORTHO05D025904 5.1e-09 65.9 92 42.4
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 8.6e-09 65.1 126 33.3
Aqoxy5G00551 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 1.5e-08 64.3 117 34.2
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 1.5e-08 64.3 136 30.9
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 1.9e-08 63.9 127 33.9
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 1.9e-08 63.9 123 34.1
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 2.5e-08 63.5 125 32.8
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 3.3e-08 63.2 122 35.2
CDE08G1405 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 4.3e-08 62.8 126 34.1
Eucgr.D00980 Eucalyptus grandis HOM05D007511 ORTHO05D003753 4.3e-08 62.8 125 34.4
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 7.3e-08 62.0 128 32.0
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 2.1e-07 60.5 135 32.6
Medtr8g011160 Medicago truncatula HOM05D007511 ORTHO05D003753 3.6e-07 59.7 125 33.6
Nn3g19224 Nelumbo nucifera HOM05D007511 ORTHO05D003753 3.6e-07 59.7 131 31.3
Ca_23172_v3 Cicer arietinum L. HOM05D007511 ORTHO05D003753 6.2e-07 58.9 119 34.5
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 1.1e-06 58.2 83 38.6
CDE02G0326 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 1.4e-06 57.8 125 31.2
Migut.N01683 Erythranthe guttata HOM05D007511 ORTHO05D003753 1.4e-06 57.8 91 40.7
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 5.2e-06 55.8 68 38.2
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 5.2e-06 55.8 120 35.8
PSO782G3115 Papaver somniferum HOM05D007511 ORTHO05D003753 6.8e-06 55.5 68 35.3
SalBow4G0080 Salvia bowleyana HOM05D007511 ORTHO05D003753 6.8e-06 55.5 100 34.0
SalBow4G2364 Salvia bowleyana HOM05D007511 ORTHO05D003753 6.8e-06 55.5 100 34.0
Thecc.05G230200 Theobroma cacao HOM05D007511 ORTHO05D003753 6.8e-06 55.5 107 33.6
TPR.G24583 Trifolium pratense HOM05D007511 ORTHO05D003753 6.8e-06 55.5 127 33.1
AT5G17590 Arabidopsis thaliana HOM05D007511 ORTHO05D003753 8.9e-06 55.1 130 32.3


User provided reference genes

Program Settings