Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 4.9e-187 657.9 397 100.0
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 1.2e-169 600.1 334 92.5
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 2.8e-158 562.4 402 80.3
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 5.3e-157 558.1 397 78.1
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 1.3e-147 526.9 328 82.3
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 3.6e-145 518.8 328 81.7
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 3.7e-134 482.3 339 74.6
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 1.0e-131 474.2 326 75.2
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 8.5e-131 471.1 332 72.6
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 8.5e-131 471.1 326 73.9
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 4.2e-130 468.8 326 73.0
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 6.1e-129 464.9 332 72.3
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 5.2e-128 461.8 325 75.1
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 7.4e-127 458.0 316 74.7
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 9.7e-127 457.6 334 71.3
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 1.3e-126 457.2 328 70.1
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 1.7e-126 456.8 349 68.8
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 2.8e-126 456.1 358 67.3
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 6.3e-126 454.9 325 70.8
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 8.2e-126 454.5 329 71.1
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 3.1e-125 452.6 329 69.9
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 3.1e-125 452.6 338 71.0
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 1.2e-124 450.7 319 72.1
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 2.6e-124 449.5 324 72.2
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 3.5e-124 449.1 329 70.5
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 5.9e-124 448.4 355 67.6
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 1.7e-123 446.8 336 69.3
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 2.2e-123 446.4 329 71.4
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 3.8e-123 445.7 321 70.1
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 5.0e-123 445.3 314 72.3
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 8.5e-123 444.5 327 69.1
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 8.5e-123 444.5 330 68.8
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 1.5e-122 443.7 325 71.1
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 1.2e-121 440.7 325 70.5
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 2.1e-121 439.9 332 68.1
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 2.3e-120 436.4 332 67.8
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 5.2e-120 435.3 331 69.2
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 8.8e-120 434.5 320 71.9
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 8.8e-120 434.5 326 68.4
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 8.8e-120 434.5 329 70.5
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 1.2e-119 434.1 326 67.8
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 1.5e-119 433.7 330 69.7
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 1.5e-119 433.7 328 69.8
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 2.6e-119 433.0 330 69.4
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 3.4e-119 432.6 328 69.2
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 3.4e-119 432.6 339 67.8
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 9.7e-119 431.0 325 70.5
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 9.7e-119 431.0 332 70.5
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 9.7e-119 431.0 332 70.8
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 1.3e-118 430.6 329 70.5
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 1.3e-118 430.6 327 70.3
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 1.7e-118 430.3 327 67.6
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 1.7e-118 430.3 327 69.7
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 2.2e-118 429.9 325 70.5
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 3.7e-118 429.1 330 67.9
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 8.3e-118 427.9 331 66.5
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.1e-117 427.6 339 66.4
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 1.1e-117 427.6 325 69.5
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 1.4e-117 427.2 327 67.9
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.4e-117 427.2 339 66.1
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 1.8e-117 426.8 319 71.8
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 1.8e-117 426.8 329 68.1
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 2.4e-117 426.4 325 70.2
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 2.4e-117 426.4 339 66.4
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 2.4e-117 426.4 326 67.5
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 5.3e-117 425.2 328 67.7
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 1.6e-116 423.7 327 66.1
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 5.9e-116 421.8 331 65.9
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 5.9e-116 421.8 331 65.9
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 5.9e-116 421.8 288 75.3
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 1.7e-115 420.2 326 66.3
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 1.7e-115 420.2 314 70.4
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 2.2e-115 419.9 323 67.5
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 6.5e-115 418.3 334 65.3
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 6.5e-115 418.3 323 65.9
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 3.2e-114 416.0 286 75.5
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 3.2e-114 416.0 326 65.6
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 5.5e-114 415.2 333 65.5
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 5.5e-114 415.2 330 67.0
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 9.4e-114 414.5 330 64.8
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 2.7e-113 412.9 327 66.1
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 4.7e-113 412.1 284 73.6
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 6.1e-113 411.8 312 67.6
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 8.0e-113 411.4 368 60.9
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 2.3e-112 409.8 329 66.6
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 1.5e-111 407.1 327 67.3
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 2.0e-111 406.8 332 63.6
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 2.0e-111 406.8 339 63.7
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 2.6e-111 406.4 338 64.2
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 1.7e-110 403.7 329 64.1
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 2.8e-110 402.9 301 68.8
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 4.8e-110 402.1 339 62.5
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 6.3e-110 401.7 327 65.4
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 2.4e-109 399.8 332 62.7
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 5.0e-107 392.1 293 68.9
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 1.5e-106 390.6 335 63.3
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 1.9e-106 390.2 309 66.0
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 1.2e-105 387.5 350 60.6
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 4.7e-105 385.6 356 61.0
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 1.2e-103 380.9 326 61.7
ECA234G3220 Erigeron canadensis HOM05D001638 ORTHO05D005197 2.8e-102 376.3 289 67.8
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.8e-102 376.3 446 50.4
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 1.0e-99 367.9 347 59.1
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 2.1e-97 360.1 298 62.4
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 2.6e-95 353.2 308 60.7
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 3.7e-94 349.4 324 59.9
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 4.9e-94 349.0 298 60.4
Nitab4.5_0000914g0150 Nicotiana tabacum HOM05D001638 ORTHO05D005197 1.5e-90 337.4 292 65.1
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 7.3e-90 335.1 339 53.4
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 2.3e-88 330.1 305 59.7
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 6.4e-86 322.0 308 58.4
Nitab4.5_0010229g0010 Nicotiana tabacum HOM05D001638 ORTHO05D005197 2.7e-84 316.6 225 74.2
SGA_v2.0_scaffold131G34466 Striga asiatica HOM05D001638 ORTHO05D005197 4.0e-72 276.2 214 65.9
MD07G1102000 Malus domestica HOM05D001638 ORTHO05D005197 6.6e-67 258.8 216 65.3
Mapoly0029s0122 Marchantia polymorpha HOM05D001638 ORTHO05D005197 7.3e-66 255.4 336 43.8
Pp3c5_7370 Physcomitrium patens HOM05D001638 ORTHO05D005197 6.4e-62 242.3 323 41.8
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 7.9e-52 208.8 308 45.1
Atru.chr5.164 Acer truncatum HOM05D001638 ORTHO05D005197 3.9e-51 206.5 157 68.2
Actinidia12156 Actinidia chinensis HOM05D001638 ORTHO05D005197 2.1e-49 200.7 116 84.5
AUR62013726 Chenopodium quinoa HOM05D001638 ORTHO05D005197 1.2e-47 194.9 134 74.6
FAN06G4892 Fragaria x ananassa HOM05D001638 ORTHO05D005197 4.5e-47 193.0 154 66.2
FAN03G2111 Fragaria x ananassa HOM05D001638 ORTHO05D001690 5.5e-45 186.0 156 64.1
AL4G38750 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 1.8e-40 171.0 159 58.5
Haze_17173 Corylus avellana HOM05D001638 ORTHO05D005197 4.5e-39 166.4 215 49.3
Atru.chr5.165 Acer truncatum HOM05D001638 ORTHO05D005197 7.6e-39 165.6 111 77.5
arahy.Tifrunner.gnm1.ann1.XG8PKW Arachis hypogaea HOM05D001638 ORTHO05D005197 5.0e-38 162.9 174 53.4
Cre13.g587000 Chlamydomonas reinhardtii HOM05D001638 ORTHO05D005197 1.1e-37 161.8 385 31.4
MCO04G285 Micromonas commoda HOM05D001638 ORTHO05D005197 2.5e-37 160.6 361 33.2
SMO141G0070 Selaginella moellendorffii HOM05D001638 ORTHO05D005197 5.5e-37 159.5 260 38.1
MD02G1263900 Malus domestica HOM05D001638 ORTHO05D005197 2.7e-28 130.6 98 66.3
Actinidia12157 Actinidia chinensis HOM05D001638 ORTHO05D005197 8.8e-27 125.6 75 82.7
Actinidia12155 Actinidia chinensis HOM05D001638 ORTHO05D005197 4.3e-26 123.2 81 79.0
MD07G1101900 Malus domestica HOM05D001638 ORTHO05D005197 2.8e-25 120.6 165 43.6
Cpa.g.sc116.74 Carica papaya HOM05D001638 ORTHO05D005197 3.7e-25 120.2 85 72.9
Cpa.g.c42599 Carica papaya HOM05D001638 ORTHO05D005197 1.4e-19 101.7 62 80.6
AagrBONN_evm.TU.Sc2ySwM_368.1521 Anthoceros agrestis HOM05D001638 ORTHO05D005197 3.0e-19 100.5 96 55.2
CBR_g1066 Chara braunii HOM05D001638 ORTHO05D005197 3.0e-19 100.5 158 41.1
MD02G1264000 Malus domestica HOM05D001638 ORTHO05D005197 8.8e-19 99.0 69 71.0
MD02G1264200 Malus domestica HOM05D001638 ORTHO05D005197 1.1e-18 98.6 68 73.5
FAN06G4261 Fragaria x ananassa HOM05D001638 ORTHO05D005197 1.5e-18 98.2 178 40.4
arahy.Tifrunner.gnm1.ann1.HIFV4E Arachis hypogaea HOM05D001638 ORTHO05D005197 2.6e-18 97.4 177 36.7
Oeu051899.1 Olea europaea HOM05D001638 ORTHO05D005197 9.7e-18 95.5 59 79.7
arahy.Tifrunner.gnm1.ann1.XV6DNZ Arachis hypogaea HOM05D001638 ORTHO05D005197 2.2e-17 94.4 56 82.1
PRCOL_00005874 Prasinoderma coloniale HOM05D001638 ORTHO05D005197 6.3e-17 92.8 337 27.6
FvH4_7g09370 Fragaria vesca HOM05D001638 ORTHO05D005197 9.1e-16 89.0 134 43.3
MD07G1102300 Malus domestica HOM05D001638 ORTHO05D005197 9.1e-16 89.0 95 53.7
Oeu021607.1 Olea europaea HOM05D001638 ORTHO05D005197 9.1e-16 89.0 59 72.9
arahy.Tifrunner.gnm1.ann1.11FR17 Arachis hypogaea HOM05D001638 ORTHO05D005197 3.5e-15 87.0 61 68.9
Cfa024988 Carpinus fangiana HOM05D001638 ORTHO05D124161 8.0e-12 75.9 326 27.6
FAN06G2650 Fragaria x ananassa HOM05D001638 ORTHO05D005197 8.0e-12 75.9 89 50.6
Sed0021805 Sechium edule HOM05D001638 ORTHO05D005197 7.5e-10 69.3 110 44.5
CBR_g1068 Chara braunii HOM05D001638 ORTHO05D005197 1.4e-08 65.1 118 31.4
MD07G1073400 Malus domestica HOM05D001638 ORTHO05D005197 1.6e-07 61.6 60 51.7
arahy.Tifrunner.gnm1.ann1.R2G04T Arachis hypogaea HOM05D001638 ORTHO05D005197 7.7e-07 59.3 33 84.8
CSS0018530 Camellia sinensis var. sinensis HOM05D015837 ORTHO05D005197 8.5e-06 55.8 52 55.8


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