Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 4.0e-142 508.1 251 100.0
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 1.5e-120 436.4 254 86.6
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 8.1e-103 377.5 250 74.8
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 5.2e-102 374.8 250 74.8
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 1.5e-101 373.2 247 74.5
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.9e-100 369.0 248 76.2
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 6.4e-100 367.9 220 80.0
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 6.4e-100 367.9 244 75.0
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 8.4e-100 367.5 256 73.8
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 2.4e-99 365.9 246 74.0
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 4.2e-99 365.2 242 76.9
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 6.0e-98 361.3 251 73.7
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.3e-97 360.1 246 74.8
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.7e-97 359.8 250 72.4
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.3e-97 359.4 250 72.0
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 3.0e-97 359.0 250 72.0
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 3.0e-97 359.0 255 71.4
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 3.9e-97 358.6 244 74.2
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 3.9e-97 358.6 207 82.1
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 3.9e-97 358.6 248 72.2
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 6.6e-97 357.8 233 74.2
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 6.6e-97 357.8 247 73.3
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 6.6e-97 357.8 244 74.2
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 8.7e-97 357.5 196 85.2
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 1.9e-96 356.3 252 73.0
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 3.3e-96 355.5 248 71.4
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 3.3e-96 355.5 228 75.9
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 5.6e-96 354.8 246 72.4
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 7.3e-96 354.4 205 82.4
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 7.3e-96 354.4 195 83.6
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 9.6e-96 354.0 247 73.7
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 1.3e-95 353.6 249 72.3
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 1.6e-95 353.2 230 74.8
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 1.6e-95 353.2 253 71.1
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 1.6e-95 353.2 245 72.2
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 2.1e-95 352.8 246 72.0
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 2.1e-95 352.8 249 70.7
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 3.6e-95 352.1 201 79.6
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 3.6e-95 352.1 249 71.9
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 3.6e-95 352.1 248 71.4
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 4.8e-95 351.7 246 72.0
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 8.1e-95 350.9 212 77.4
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 3.1e-94 349.0 243 71.2
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 6.9e-94 347.8 253 70.4
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 6.9e-94 347.8 251 71.3
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 9.0e-94 347.4 226 74.3
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 9.0e-94 347.4 222 75.7
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 9.0e-94 347.4 228 74.1
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 1.2e-93 347.1 239 71.1
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 1.5e-93 346.7 246 71.1
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 1.5e-93 346.7 283 65.7
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 2.0e-93 346.3 249 69.5
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 2.0e-93 346.3 195 82.1
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 2.6e-93 345.9 228 73.7
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 2.6e-93 345.9 246 71.1
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 2.6e-93 345.9 197 82.2
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 7.6e-93 344.4 206 79.1
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 7.6e-93 344.4 238 72.3
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 1.3e-92 343.6 250 69.6
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 1.7e-92 343.2 211 78.2
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 1.7e-92 343.2 258 69.0
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 1.7e-92 343.2 253 70.0
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 4.9e-92 341.7 226 73.5
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 1.4e-91 340.1 196 81.1
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 1.4e-91 340.1 258 68.2
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 3.2e-91 339.0 255 68.2
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 9.3e-91 337.4 194 81.4
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 2.1e-90 336.3 244 71.7
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 6.0e-90 334.7 248 68.5
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 2.3e-89 332.8 246 68.3
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 1.1e-88 330.5 249 69.5
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 1.5e-88 330.1 232 71.1
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 3.6e-87 325.5 245 68.6
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 6.2e-87 324.7 193 77.2
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 8.1e-87 324.3 227 73.1
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 1.4e-86 323.6 235 70.2
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 7.6e-85 317.8 247 63.2
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 7.1e-83 311.2 255 65.5
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 2.1e-82 309.7 181 80.1
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.1e-82 309.7 188 73.4
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 5.1e-81 305.1 206 74.3
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 3.3e-80 302.4 199 72.9
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 4.8e-79 298.5 244 65.6
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.4e-78 296.2 239 65.3
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 2.0e-77 293.1 253 60.5
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.0e-77 293.1 243 60.1
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.6e-77 292.7 175 74.3
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 5.8e-77 291.6 197 72.6
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 1.9e-75 286.6 200 67.5
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 4.2e-75 285.4 218 64.2
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 2.5e-72 276.2 205 69.8
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 2.0e-69 266.5 196 66.3
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 3.2e-67 259.2 252 58.3
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 7.9e-66 254.6 258 55.0
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.5e-64 249.6 148 77.7
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 1.1e-62 244.2 185 68.1
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 6.7e-57 224.9 173 61.8
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.2e-55 219.9 202 59.9
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.7e-55 219.2 243 53.5
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 8.2e-55 218.0 137 76.6
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 6.5e-52 208.4 225 49.3
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 4.2e-51 205.7 199 54.8
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 9.7e-48 194.5 200 54.5
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 5.9e-45 185.3 165 62.4
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.0e-41 174.5 149 54.4
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.3e-41 173.3 105 76.2
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 3.3e-40 169.5 103 74.8
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 8.0e-26 121.7 211 38.4
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 6.8e-25 118.6 71 80.3
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 2.0e-24 117.1 68 75.0
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 1.3e-12 77.8 48 77.1


User provided reference genes

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