Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 0.0e+00 1212.2 633 100.0
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 7.1e-164 581.6 644 56.1
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.1e-159 567.8 644 55.1
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 5.1e-154 548.9 634 53.9
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 4.3e-137 492.7 647 48.4
vmacro13232 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 1.7e-136 490.7 369 74.8
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.1e-124 451.4 592 49.0
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 9.4e-124 448.4 639 45.7
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 1.6e-123 447.6 643 46.2
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 4.7e-123 446.0 639 46.8
CSS0041346 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 9.7e-121 438.3 537 53.1
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 3.8e-117 426.4 641 44.5
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 1.1e-116 424.9 648 44.8
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 1.6e-115 421.0 636 44.5
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 5.2e-114 416.0 644 43.6
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 6.8e-114 415.6 645 42.9
Peaxi162Scf00020g01410 Petunia axillaris HOM05D004687 ORTHO05D006002 8.8e-114 415.2 641 44.1
Cfa003875 Carpinus fangiana HOM05D004687 ORTHO05D006002 3.7e-112 409.8 606 44.7
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 1.1e-111 408.3 646 44.6
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.2e-110 404.8 592 45.6
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 1.7e-109 401.0 617 43.3
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 8.5e-109 398.7 687 41.9
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 2.5e-108 397.1 631 43.9
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 1.2e-107 394.8 739 39.5
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 8.0e-107 392.1 608 43.1
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 1.4e-106 391.3 641 42.9
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 1.4e-106 391.3 653 41.7
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 1.7e-104 384.4 641 42.6
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 5.4e-103 379.4 629 42.1
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 1.2e-102 378.3 635 41.6
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 1.6e-102 377.9 629 42.0
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 1.0e-101 375.2 642 41.3
Nitab4.5_0009238g0010 Nicotiana tabacum HOM05D004687 ORTHO05D006002 8.6e-101 372.1 640 42.7
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 1.6e-99 367.9 633 40.3
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 2.1e-99 367.5 643 41.7
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 4.7e-99 366.3 634 39.7
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 3.0e-98 363.6 666 39.3
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 6.8e-98 362.5 636 41.0
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 2.0e-97 360.9 641 40.1
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 2.6e-97 360.5 645 41.4
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 7.5e-97 359.0 646 39.8
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 7.5e-97 359.0 640 40.8
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 2.2e-96 357.5 645 39.5
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 6.4e-96 355.9 639 41.2
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 6.4e-96 355.9 603 42.0
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 8.3e-96 355.5 637 38.9
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 1.4e-95 354.8 642 39.1
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 1.8e-95 354.4 642 40.5
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 2.4e-95 354.0 636 40.6
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 2.4e-95 354.0 645 40.0
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 4.1e-95 353.2 635 41.6
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 4.6e-94 349.7 632 39.2
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 1.7e-93 347.8 643 39.0
Peaxi162Scf00403g00830 Petunia axillaris HOM05D004687 ORTHO05D006002 1.7e-93 347.8 573 43.5
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 6.6e-93 345.9 628 39.0
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 6.6e-93 345.9 628 39.0
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 1.9e-92 344.4 657 39.0
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 4.3e-92 343.2 633 39.8
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.2e-91 341.7 628 38.7
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 6.2e-91 339.3 631 38.4
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 6.8e-90 335.9 641 40.6
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 8.9e-90 335.5 631 39.0
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 2.0e-89 334.3 647 40.2
PGSC0003DMG400033881 Solanum tuberosum HOM05D004687 ORTHO05D006002 2.6e-89 334.0 561 42.2
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 9.8e-89 332.0 556 41.7
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 8.3e-88 328.9 645 38.0
Sopen05g028410 Solanum pennellii HOM05D004687 ORTHO05D006002 8.3e-88 328.9 556 41.0
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 2.0e-86 324.3 690 36.4
Haze_15561 Corylus avellana HOM05D004687 ORTHO05D006002 3.0e-85 320.5 639 37.9
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 5.0e-85 319.7 642 37.9
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 2.1e-83 314.3 644 37.4
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 3.6e-83 313.5 631 38.5
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 8.1e-83 312.4 629 38.5
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 2.3e-82 310.8 629 37.7
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 1.1e-79 302.0 664 36.7
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 7.8e-78 295.8 632 36.6
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 1.5e-73 281.6 648 38.0
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 2.6e-73 280.8 629 35.9
vmacro13233 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 1.2e-70 271.9 186 78.0
TPR.G28289 Trifolium pratense HOM05D004687 ORTHO05D006002 4.3e-68 263.5 612 36.3
unitig_699.g19806 Utricularia gibba HOM05D004687 ORTHO05D006002 1.2e-67 261.9 660 33.8
Ah.05g180180 Amaranthus hybridus HOM05D004687 ORTHO05D006002 1.8e-66 258.1 397 42.6
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 9.9e-65 252.3 661 32.5
AUR62004410 Chenopodium quinoa HOM05D004687 ORTHO05D006002 2.2e-64 251.1 353 43.1
Actinidia10067 Actinidia chinensis HOM05D004687 ORTHO05D006002 1.1e-63 248.8 420 44.3
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 7.1e-63 246.1 647 33.5
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 2.7e-62 244.2 642 32.7
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 6.0e-62 243.0 636 32.4
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 6.0e-62 243.0 643 32.8
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 1.3e-61 241.9 637 34.1
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 1.7e-61 241.5 651 33.0
EL10Ac1g00358 Beta vulgaris HOM05D004687 ORTHO05D006002 1.1e-60 238.8 582 35.4
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 2.5e-60 237.7 641 32.3
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 7.3e-60 236.1 636 32.1
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 2.1e-59 234.6 631 34.2
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 2.8e-59 234.2 557 34.1
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 1.1e-58 232.3 635 33.1
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 1.8e-58 231.5 628 33.3
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 2.4e-58 231.1 635 32.4
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 2.4e-58 231.1 635 32.3
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 4.0e-58 230.3 639 32.7
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 1.2e-57 228.8 635 32.3
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 1.5e-57 228.4 639 32.6
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 4.5e-57 226.9 635 32.0
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 4.9e-56 223.4 628 33.0
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 4.9e-56 223.4 628 33.0
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 4.9e-56 223.4 628 33.0
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 6.4e-56 223.0 563 33.0
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 9.3e-55 219.2 649 32.7
Nitab4.5_0002262g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 6.0e-54 216.5 562 33.5
FAN01G0098 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.1e-53 213.4 532 34.0
Os08g0151700 Oryza sativa ssp. japonica HOM05D004687 ORTHO05D006002 3.1e-50 204.1 655 29.2
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 4.5e-49 200.3 652 28.8
Gohir.A11G092200 Gossypium hirsutum HOM05D004687 ORTHO05D006002 7.6e-49 199.5 491 35.4
Lalb_Chr17g0339021 Lupinus albus HOM05D004687 ORTHO05D006002 3.2e-47 194.1 212 51.9
CsaV3_6G000900 Cucumis sativus L. HOM05D004687 ORTHO05D006002 1.0e-45 189.1 554 33.4
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 4.3e-44 183.7 635 30.4
FAN03G2011 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.7e-43 180.6 455 34.9
SGA_v2.0_scaffold95G28804 Striga asiatica HOM05D004687 ORTHO05D006002 1.4e-42 178.7 224 47.8
AUR62022616 Chenopodium quinoa HOM05D004687 ORTHO05D006002 5.3e-42 176.8 555 31.5
Actinidia20138 Actinidia chinensis HOM05D004687 ORTHO05D006002 7.9e-38 162.9 120 69.2
Pp3c23_12760 Physcomitrium patens HOM05D004687 ORTHO05D006002 1.8e-37 161.8 665 25.9
Nitab4.5_0003779g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 6.7e-37 159.8 526 30.2
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 2.1e-35 154.8 119 61.3
FAN19G0767 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.3e-34 150.2 306 35.9
Lalb_Chr17g0339031 Lupinus albus HOM05D004687 ORTHO05D006002 5.3e-34 150.2 367 34.9
FAN28G2978 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.6e-33 147.9 306 35.3
Sopen01g038880 Solanum pennellii HOM05D004687 ORTHO05D006002 4.5e-33 147.1 328 36.9
MD01G1071100 Malus domestica HOM05D004687 ORTHO05D006002 8.5e-32 142.9 104 64.4
SMO147G0044 Selaginella moellendorffii HOM05D004687 ORTHO05D006002 8.5e-32 142.9 314 31.5
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 1.4e-31 142.1 654 27.2
Potri.002G164000 Populus trichocarpa HOM05D004687 ORTHO05D006002 3.6e-30 137.5 349 35.8
FvH4_1g19860 Fragaria vesca HOM05D004687 ORTHO05D006002 7.9e-30 136.3 652 26.2
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 8.2e-27 126.3 119 49.6
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 4.1e-26 124.0 652 26.1
SHI13366 Sapria himalayana HOM05D004687 ORTHO05D006002 4.1e-26 124.0 166 44.0
SHI13367 Sapria himalayana HOM05D004687 ORTHO05D006002 7.7e-25 119.8 107 61.7
CDE11G0743 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 2.2e-19 101.7 520 27.9
COL.COLO4_21921 Corchorus olitorius HOM05D004687 ORTHO05D006002 8.2e-19 99.8 153 37.9
CBR_g45680 Chara braunii HOM05D004687 ORTHO05D006002 2.2e-16 91.7 347 26.8
FAN23G1626 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.1e-14 85.1 560 24.5
PSO541G1518 Papaver somniferum HOM05D004687 ORTHO05D006002 1.4e-13 82.4 154 33.1
Mapoly0091s0017 Marchantia polymorpha HOM05D004687 ORTHO05D006002 2.2e-08 65.1 336 21.4
ATR0804G028 Amborella trichopoda HOM05D004687 ORTHO05D006002 5.0e-08 63.9 113 38.1
SGA_v2.0_scaffold95G28808 Striga asiatica HOM05D005821 ORTHO05D006649 9.4e-07 59.7 84 46.4
Ca_03421_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 8.0e-06 56.6 129 37.2


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