Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 1.5e-305 1052.0 507 100.0
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 6.8e-266 920.2 530 86.4
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 9.5e-244 846.7 507 81.9
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 5.2e-242 840.9 519 79.4
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.2e-241 839.7 508 81.3
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.8e-234 815.8 480 82.5
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 1.6e-230 802.7 510 78.2
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 1.6e-230 802.7 465 81.7
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 3.6e-227 791.6 508 76.2
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 8.9e-226 786.9 512 75.2
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 4.4e-225 784.6 522 74.5
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 2.2e-224 782.3 486 77.2
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 3.2e-223 778.5 511 75.0
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 7.1e-223 777.3 510 74.1
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 7.1e-223 777.3 460 79.8
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 9.2e-223 776.9 487 75.2
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 1.2e-222 776.5 465 80.4
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 1.2e-222 776.5 481 77.1
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.2e-222 776.5 481 77.1
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 2.7e-222 775.4 478 76.8
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 4.6e-222 774.6 513 72.7
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 6.0e-222 774.2 510 74.5
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 2.3e-221 772.3 520 72.1
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 3.0e-221 771.9 472 78.0
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 8.7e-221 770.4 487 75.8
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.5e-220 769.6 508 72.8
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 3.3e-220 768.5 504 72.8
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 7.3e-220 767.3 506 74.7
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 2.1e-219 765.8 498 74.1
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 8.1e-219 763.8 495 74.7
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 8.1e-219 763.8 500 74.6
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 4.4e-217 758.1 510 72.4
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 1.7e-216 756.1 499 72.5
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 2.9e-216 755.4 520 71.0
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 6.4e-216 754.2 502 73.3
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 8.4e-216 753.8 470 76.6
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 1.1e-215 753.4 532 71.2
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 3.2e-215 751.9 511 72.8
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 3.2e-215 751.9 496 73.4
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 4.2e-215 751.5 510 72.7
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 9.3e-215 750.4 513 71.2
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 6.0e-214 747.7 453 79.0
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 6.0e-214 747.7 500 74.0
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 7.8e-214 747.3 492 72.2
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 1.3e-213 746.5 510 71.6
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 1.7e-213 746.1 493 72.8
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 2.3e-213 745.7 478 74.7
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 3.9e-213 745.0 498 72.3
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 5.1e-213 744.6 501 71.9
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 6.6e-213 744.2 507 71.0
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 1.5e-212 743.0 496 71.2
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 1.5e-212 743.0 508 71.9
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 1.9e-212 742.7 508 72.0
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 1.9e-212 742.7 488 72.5
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 9.6e-212 740.3 452 75.4
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 9.6e-212 740.3 499 71.5
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 9.6e-212 740.3 516 70.9
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 1.3e-211 740.0 503 72.4
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 6.2e-211 737.6 456 76.1
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 8.1e-211 737.3 455 74.9
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.1e-210 736.9 500 69.6
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 1.8e-210 736.1 456 75.7
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 2.4e-210 735.7 456 75.9
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 3.1e-210 735.3 488 71.9
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 5.3e-210 734.6 489 72.0
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.5e-209 733.0 446 77.6
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 2.0e-209 732.6 499 70.9
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 2.0e-209 732.6 478 72.8
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 2.0e-209 732.6 516 68.8
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 3.4e-209 731.9 452 75.4
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 4.5e-209 731.5 519 68.2
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 5.8e-209 731.1 482 72.2
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 5.8e-209 731.1 493 70.0
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 9.9e-209 730.3 488 72.5
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 2.9e-208 728.8 488 71.1
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 3.2e-207 725.3 452 75.2
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 9.3e-207 723.8 506 68.8
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 2.1e-206 722.6 452 74.8
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 3.0e-205 718.8 519 68.4
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 3.3e-204 715.3 474 72.2
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 4.3e-204 714.9 447 74.0
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 2.1e-203 712.6 456 73.2
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 2.8e-203 712.2 493 70.2
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 4.8e-203 711.4 506 68.8
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 2.0e-201 706.1 509 66.8
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 2.9e-200 702.2 452 72.3
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 1.4e-199 699.9 451 71.4
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 3.5e-198 695.3 503 66.4
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 3.3e-196 688.7 511 65.2
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 9.6e-196 687.2 452 72.6
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 4.3e-188 661.8 412 74.5
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 1.4e-186 656.8 457 70.2
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 2.0e-185 652.9 503 65.4
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 1.0e-184 650.6 460 69.8
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 4.8e-179 631.7 480 61.9
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.1e-178 630.6 493 62.5
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 2.1e-174 616.3 474 63.7
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 3.3e-172 609.0 445 62.9
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.5e-169 600.1 362 77.9
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 3.5e-169 599.0 446 63.7
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 2.3e-165 586.3 513 59.1
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 3.0e-165 585.9 392 71.7
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 4.1e-162 575.5 404 70.5
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 5.7e-140 501.9 471 58.8
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 6.3e-139 498.4 326 73.3
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 1.4e-133 480.7 468 52.4
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.3e-120 437.6 315 70.5
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 4.6e-113 412.5 478 46.4
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 3.0e-104 383.3 288 66.3
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 3.4e-100 369.8 464 45.0
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 9.3e-82 308.5 450 39.6
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 4.0e-40 170.2 226 41.2
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 8.8e-40 169.1 100 77.0
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 2.6e-31 141.0 95 69.5
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 2.6e-31 141.0 95 69.5
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 2.6e-31 141.0 95 69.5
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 2.6e-31 141.0 95 69.5
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 3.1e-29 134.0 277 33.2
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 1.2e-23 115.5 78 62.8
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 2.1e-17 94.7 57 71.9
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 4.1e-13 80.5 43 88.4
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 1.5e-10 72.0 68 58.8
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.1e-08 65.9 41 82.9
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 1.8e-08 65.1 40 70.0
BcaC08g45232 Brassica carinata HOM05D000289 ORTHO05D000208 8.3e-06 56.2 45 53.3


User provided reference genes

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