Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim07G0008500 Rhododendron simsii HOM05D001461 ORTHO05D005534 1.4e-90 336.3 167 100.0
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 2.6e-49 199.1 167 63.5
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 2.2e-48 196.1 167 60.5
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 1.2e-46 190.3 166 59.6
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 1.2e-46 190.3 167 61.1
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 1.2e-46 190.3 165 59.4
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 1.6e-46 189.9 166 60.8
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 1.6e-46 189.9 167 59.3
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 3.5e-46 188.7 166 60.8
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 3.5e-46 188.7 167 61.1
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 3.5e-46 188.7 167 61.7
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 3.5e-46 188.7 166 63.3
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 4.6e-46 188.3 167 58.7
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 4.6e-46 188.3 167 58.1
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 1.0e-45 187.2 165 60.0
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 1.0e-45 187.2 167 58.7
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 1.0e-45 187.2 167 58.7
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 1.0e-45 187.2 167 58.7
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 1.3e-45 186.8 167 59.9
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 1.8e-45 186.4 164 57.9
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 2.3e-45 186.0 169 60.9
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 2.3e-45 186.0 166 59.0
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 3.0e-45 185.7 167 58.7
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 3.0e-45 185.7 167 59.3
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 3.0e-45 185.7 167 59.3
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 3.0e-45 185.7 167 59.3
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 3.9e-45 185.3 167 58.1
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 5.1e-45 184.9 166 59.6
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 5.1e-45 184.9 167 57.5
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 5.1e-45 184.9 166 59.0
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 6.7e-45 184.5 166 59.6
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 6.7e-45 184.5 166 59.6
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 6.7e-45 184.5 166 58.4
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 6.7e-45 184.5 167 57.5
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 8.7e-45 184.1 166 57.2
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 8.7e-45 184.1 166 57.8
VMungo1215G2099 Vigna mungo HOM05D001461 ORTHO05D005534 8.7e-45 184.1 167 56.9
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 1.1e-44 183.7 166 57.8
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 1.1e-44 183.7 167 56.9
Phvul.002G161800 Phaseolus vulgaris HOM05D001461 ORTHO05D005534 1.5e-44 183.3 167 56.9
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 1.5e-44 183.3 166 59.6
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 1.5e-44 183.3 166 58.4
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 1.9e-44 183.0 166 58.4
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 1.9e-44 183.0 166 57.2
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 2.5e-44 182.6 167 55.7
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 2.5e-44 182.6 167 57.5
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 3.3e-44 182.2 165 59.4
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 4.3e-44 181.8 167 55.7
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 4.3e-44 181.8 163 57.1
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 4.3e-44 181.8 167 56.9
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 5.7e-44 181.4 166 58.4
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 5.7e-44 181.4 166 58.4
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 7.4e-44 181.0 165 58.2
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 1.3e-43 180.3 165 57.0
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 2.2e-43 179.5 167 57.5
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 2.2e-43 179.5 167 57.5
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 2.2e-43 179.5 166 57.2
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 2.8e-43 179.1 167 55.7
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 2.8e-43 179.1 166 57.8
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 2.8e-43 179.1 166 57.2
Zm00001eb376350 Zea mays HOM05D001461 ORTHO05D005534 2.8e-43 179.1 167 55.7
Zm00001eb376190 Zea mays HOM05D001461 ORTHO05D005534 3.7e-43 178.7 166 56.0
Zm00001eb376220 Zea mays HOM05D001461 ORTHO05D005534 3.7e-43 178.7 166 56.0
Zm00001eb376310 Zea mays HOM05D001461 ORTHO05D005534 3.7e-43 178.7 166 56.0
Zm00001eb376910 Zea mays HOM05D001461 ORTHO05D005534 3.7e-43 178.7 166 56.0
Zm00001eb376940 Zea mays HOM05D001461 ORTHO05D005534 3.7e-43 178.7 166 56.0
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 4.8e-43 178.3 166 56.6
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 4.8e-43 178.3 165 56.4
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 6.3e-43 177.9 166 57.2
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 8.2e-43 177.6 166 57.2
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 1.1e-42 177.2 166 57.2
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 1.8e-42 176.4 166 57.2
Zm00001eb376260 Zea mays HOM05D001461 ORTHO05D005534 1.8e-42 176.4 166 55.4
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 2.4e-42 176.0 166 55.4
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 2.4e-42 176.0 165 57.0
Os06g0158700 Oryza sativa ssp. japonica HOM05D001461 ORTHO05D005534 3.1e-42 175.6 165 55.2
SGA_v2.0_scaffold4G02266 Striga asiatica HOM05D001461 ORTHO05D005534 3.1e-42 175.6 166 56.6
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 4.1e-42 175.3 166 54.8
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 4.1e-42 175.3 168 57.1
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 4.1e-42 175.3 166 56.6
SGA_v2.0_scaffold95G28797 Striga asiatica HOM05D001461 ORTHO05D005534 5.3e-42 174.9 166 56.0
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 5.9e-41 171.4 165 55.8
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 1.0e-40 170.6 163 57.1
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 1.0e-40 170.6 162 55.6
EL10Ac1g00327 Beta vulgaris HOM05D001461 ORTHO05D005534 2.9e-40 169.1 165 54.5
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 2.9e-40 169.1 166 55.4
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 8.5e-40 167.5 163 56.4
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 8.5e-40 167.5 149 60.4
Lj4g0014781 Lotus japonicus HOM05D001461 ORTHO05D005534 2.5e-39 166.0 167 55.1
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 3.2e-39 165.6 164 53.0
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 3.2e-39 165.6 163 52.8
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 3.2e-39 165.6 165 52.7
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 5.5e-39 164.9 165 53.9
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 5.5e-39 164.9 165 52.1
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 5.5e-39 164.9 165 52.1
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 5.5e-39 164.9 165 52.1
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 5.5e-39 164.9 165 52.1
AUR62004435 Chenopodium quinoa HOM05D001461 ORTHO05D005534 5.5e-39 164.9 165 52.1
AUR62023513 Chenopodium quinoa HOM05D001461 ORTHO05D005534 5.5e-39 164.9 165 52.1
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 7.2e-39 164.5 165 52.1
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 7.2e-39 164.5 165 52.1
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 7.2e-39 164.5 165 52.1
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 9.3e-39 164.1 164 54.3
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 9.3e-39 164.1 163 54.6
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 1.2e-38 163.7 163 54.0
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 1.6e-38 163.3 165 50.9
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 1.6e-38 163.3 165 51.5
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 1.6e-38 163.3 165 51.5
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 2.7e-38 162.5 165 51.5
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 4.6e-38 161.8 165 50.9
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 4.6e-38 161.8 165 50.9
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 4.6e-38 161.8 165 50.9
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 1.0e-37 160.6 165 50.3
Sc01g0010020 Simmondsia chinensis HOM05D001461 ORTHO05D005534 1.0e-37 160.6 165 52.7
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 1.4e-37 160.2 167 50.3
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 3.0e-37 159.1 166 52.4
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.7e-35 153.3 148 57.4
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 1.7e-35 153.3 148 57.4
Carub.0007s3383 Capsella rubella HOM05D001461 ORTHO05D005534 1.7e-35 153.3 165 50.9
Sc01g0003060 Simmondsia chinensis HOM05D001461 ORTHO05D005534 2.8e-35 152.5 167 52.1
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 3.7e-35 152.1 149 55.7
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 8.2e-35 151.0 148 54.1
TPR.G32972 Trifolium pratense HOM05D001461 ORTHO05D005534 6.9e-34 147.9 146 54.8
Lj4g0009029 Lotus japonicus HOM05D001461 ORTHO05D005534 5.9e-33 144.8 167 50.3
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 1.0e-32 144.1 181 45.3
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 3.8e-32 142.1 147 52.4
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 1.1e-31 140.6 147 53.1
HPP92_002836 Vanilla planifolia HOM05D001461 ORTHO05D005534 5.5e-31 138.3 151 49.0
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 1.6e-30 136.7 147 51.0
Ah.07g196880 Amaranthus hybridus HOM05D001461 ORTHO05D005534 2.3e-29 132.9 147 49.0
SMO364G0470 Selaginella moellendorffii HOM05D001461 ORTHO05D005534 3.3e-28 129.0 164 42.1
Pp3c1_2350 Physcomitrium patens HOM05D001461 ORTHO05D005534 1.3e-27 127.1 163 41.7
vmacro13208 Vaccinium macrocarpon HOM05D001461 ORTHO05D005534 1.4e-26 123.6 80 76.2
Mapoly0143s0026 Marchantia polymorpha HOM05D001461 ORTHO05D005534 6.9e-26 121.3 164 38.4
AagrBONN_evm.TU.Sc2ySwM_344.4522 Anthoceros agrestis HOM05D001461 ORTHO05D005534 9.1e-26 120.9 160 41.2
Hund27230 Selenicereus undatus HOM05D001461 ORTHO05D005534 5.9e-25 118.2 150 46.7
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 2.5e-23 112.8 59 86.4
arahy.Tifrunner.gnm1.ann1.F4HMTZ Arachis hypogaea HOM05D001461 ORTHO05D005534 4.2e-23 112.1 58 89.7
MD08G1130100 Malus domestica HOM05D001461 ORTHO05D005534 5.5e-23 111.7 158 44.3
Lj9C594G4 Lonicera japonica HOM05D001461 ORTHO05D005534 7.2e-23 111.3 59 86.4
FAN13G0962 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.1e-22 109.8 59 84.7
arahy.Tifrunner.gnm1.ann1.NAT0LD Arachis hypogaea HOM05D001461 ORTHO05D005534 3.6e-22 109.0 56 89.3
RcHm_v2.0_Chr5g0061641 Rosa chinensis HOM05D001461 ORTHO05D005534 1.0e-21 107.5 59 83.1
MD08G1128900 Malus domestica HOM05D001461 ORTHO05D005534 1.4e-21 107.1 145 44.1
Glyma.06G264500 Glycine max HOM05D001461 ORTHO05D005534 1.8e-21 106.7 113 48.7
Ciclev10022889m.g Citrus clementina HOM05D001461 ORTHO05D005534 2.3e-21 106.3 59 84.7
Zm00001eb376250 Zea mays HOM05D001461 ORTHO05D005534 5.2e-21 105.1 59 81.4
Actinidia28489 Actinidia chinensis HOM05D001461 ORTHO05D005534 1.5e-20 103.6 52 90.4
arahy.Tifrunner.gnm1.ann1.2LVS12 Arachis hypogaea HOM05D001461 ORTHO05D005534 2.0e-20 103.2 83 63.9
Glyma.05G213500 Glycine max HOM05D001461 ORTHO05D005534 2.0e-20 103.2 59 79.7
Oeu063667.1 Olea europaea HOM05D001461 ORTHO05D005534 1.3e-19 100.5 168 41.7
QL02p032078 Quercus lobata HOM05D001461 ORTHO05D005534 1.3e-19 100.5 66 72.7
Zm00001eb376320 Zea mays HOM05D001461 ORTHO05D005534 2.2e-19 99.8 51 84.3
Cfa012281 Carpinus fangiana HOM05D001461 ORTHO05D005534 1.4e-18 97.1 50 86.0
MD14G1117200 Malus domestica HOM05D001461 ORTHO05D005534 9.1e-18 94.4 52 78.8
MCO07G452 Micromonas commoda HOM05D001461 ORTHO05D005534 2.0e-12 76.6 164 32.9
Solyc07g061860.3 Solanum lycopersicum HOM05D001461 ORTHO05D051078 4.4e-12 75.5 72 54.2
PRCOL_00003773 Prasinoderma coloniale HOM05D001461 ORTHO05D005534 5.7e-12 75.1 90 41.1
Glyma.08G020100 Glycine max HOM05D001461 ORTHO05D005534 1.1e-10 70.9 50 72.0
Sopen07g030150 Solanum pennellii HOM05D018748 ORTHO05D009630 1.2e-09 67.4 35 88.6


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