Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 0.0e+00 1224.2 609 100.0
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 3.5e-301 1037.7 622 84.6
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 4.9e-255 884.4 614 73.8
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 7.7e-232 807.4 614 69.4
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 8.6e-191 671.0 606 60.6
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 1.4e-185 653.7 607 56.2
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 5.4e-185 651.7 602 57.0
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.2e-184 650.6 602 57.5
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 8.6e-183 644.4 609 56.3
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 1.5e-182 643.7 608 56.9
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 1.9e-182 643.3 601 56.4
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 2.5e-182 642.9 613 56.9
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 3.3e-182 642.5 602 56.8
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 1.6e-181 640.2 608 56.1
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 2.1e-181 639.8 615 56.3
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 2.8e-181 639.4 609 56.8
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 4.7e-181 638.6 603 55.4
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 4.0e-180 635.6 607 55.8
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 1.5e-179 633.6 606 56.1
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 2.0e-179 633.3 601 55.9
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 2.6e-179 632.9 609 55.7
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 2.9e-178 629.4 608 55.9
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 1.9e-177 626.7 603 55.9
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 2.7e-176 622.9 601 55.2
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 6.0e-176 621.7 602 55.5
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 5.1e-175 618.6 603 55.1
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 1.5e-174 617.1 609 55.5
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 1.9e-174 616.7 705 51.6
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 2.1e-173 613.2 615 55.1
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 1.4e-172 610.5 607 53.0
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 2.0e-171 606.7 604 55.3
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 2.6e-171 606.3 605 54.4
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 4.4e-171 605.5 621 53.1
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 1.7e-170 603.6 613 53.8
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 3.8e-170 602.4 603 55.4
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 6.4e-170 601.7 610 53.6
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 1.2e-168 597.4 602 54.0
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 1.2e-168 597.4 603 53.1
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 3.5e-168 595.9 603 53.2
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 6.0e-168 595.1 607 53.9
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 1.7e-167 593.6 604 54.5
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 6.6e-167 591.7 602 53.3
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 3.3e-166 589.3 577 54.2
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 1.4e-164 583.9 608 52.6
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 1.8e-164 583.6 604 52.8
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 1.5e-163 580.5 606 51.0
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 2.6e-163 579.7 609 52.1
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 3.4e-163 579.3 607 52.6
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 9.9e-163 577.8 606 50.7
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 1.9e-161 573.5 604 50.8
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 1.9e-161 573.5 603 51.4
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 6.0e-160 568.5 603 50.7
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 7.8e-160 568.2 610 50.3
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 1.0e-159 567.8 604 50.3
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 3.9e-159 565.8 655 48.2
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 2.5e-158 563.1 603 50.7
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 5.6e-158 562.0 657 48.2
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 3.6e-157 559.3 638 50.5
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 8.4e-154 548.1 601 50.7
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 7.1e-153 545.0 611 49.4
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 6.0e-152 542.0 542 53.9
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.8e-151 540.4 604 50.0
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 4.3e-150 535.8 555 53.7
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 4.0e-148 529.3 542 53.3
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 1.7e-146 523.9 573 50.4
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 2.2e-146 523.5 603 47.9
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 3.8e-146 522.7 563 51.3
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 4.9e-146 522.3 619 49.4
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 2.2e-138 496.9 601 47.8
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 4.9e-138 495.7 583 48.0
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 9.3e-137 491.5 553 49.7
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 2.4e-132 476.9 385 62.6
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 2.2e-130 470.3 451 56.3
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 8.5e-130 468.4 560 47.5
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.6e-125 454.1 542 48.2
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 2.9e-122 443.4 631 43.9
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 5.0e-114 416.0 406 58.4
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 7.2e-113 412.1 357 58.8
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.1e-110 404.8 458 48.3
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.6e-107 394.4 603 41.3
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.9e-105 387.5 621 37.5
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 1.4e-103 381.3 415 54.0
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 4.2e-97 359.8 603 38.0
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 4.1e-92 343.2 301 59.8
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 8.0e-88 328.9 298 57.4
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 2.2e-85 320.9 297 57.6
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 1.1e-84 318.5 396 45.7
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 1.5e-81 308.1 468 40.6
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 1.1e-73 282.0 308 50.6
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 4.4e-70 270.0 268 55.2
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 2.0e-67 261.2 464 39.0
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 3.3e-65 253.8 213 61.0
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 6.4e-53 213.0 235 49.8
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 2.4e-52 211.1 257 46.3
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 3.1e-47 194.1 127 70.1
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 2.4e-44 184.5 185 53.0
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 6.6e-42 176.4 218 45.0
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 6.6e-42 176.4 218 45.0
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 9.6e-41 172.6 247 44.1
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 7.6e-38 162.9 96 79.2
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 9.9e-38 162.5 117 59.8
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 2.1e-35 154.8 195 47.2
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.5e-33 147.9 217 42.4
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 4.2e-28 130.6 101 60.4
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 1.9e-25 121.7 153 47.7
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 7.9e-19 99.8 158 38.6
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 8.7e-18 96.3 161 39.8
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 5.7e-09 67.0 386 23.3
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 7.4e-09 66.6 115 40.0


User provided reference genes

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