Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 6.5e-88 327.4 171 100.0
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 5.8e-44 181.4 208 57.2
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 1.7e-40 169.9 205 51.7
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 5.1e-40 168.3 192 55.2
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.3e-38 163.7 201 51.7
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 9.0e-37 157.5 210 50.5
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 1.5e-36 156.8 210 49.0
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 2.0e-36 156.4 212 48.1
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.2e-35 152.9 209 50.2
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 2.9e-35 152.5 204 50.0
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 3.8e-35 152.1 198 51.5
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 1.9e-34 149.8 204 50.0
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 3.2e-34 149.1 184 51.6
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 3.2e-34 149.1 207 50.7
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 5.4e-34 148.3 210 48.6
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 2.7e-33 146.0 201 51.2
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 4.6e-33 145.2 208 50.0
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 4.6e-33 145.2 202 47.0
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.7e-32 143.3 215 45.6
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 5.1e-32 141.7 204 49.5
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 5.6e-31 138.3 189 48.7
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.3e-30 137.1 221 42.5
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.3e-30 137.1 203 45.3
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 2.1e-30 136.3 211 48.3
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 2.1e-30 136.3 209 47.4
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.8e-30 136.0 221 42.1
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 3.6e-30 135.6 221 42.1
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.1e-30 134.4 215 42.8
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.1e-30 134.4 215 42.8
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 8.1e-30 134.4 209 45.0
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 1.1e-29 134.0 211 44.1
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 1.8e-29 133.3 208 48.1
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 3.1e-29 132.5 201 46.3
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 4.0e-29 132.1 192 47.9
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 6.9e-29 131.3 198 45.5
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 6.9e-29 131.3 191 47.1
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 9.9e-28 127.5 201 45.3
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 1.7e-27 126.7 219 44.3
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 3.8e-27 125.6 210 41.4
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 4.9e-27 125.2 179 47.5
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 8.4e-27 124.4 194 46.4
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 1.4e-26 123.6 201 45.3
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 2.4e-26 122.9 219 42.0
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 3.2e-26 122.5 206 43.2
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 7.1e-26 121.3 221 41.6
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 7.1e-26 121.3 189 46.0
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 9.3e-26 120.9 185 44.3
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 9.3e-26 120.9 211 42.2
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 2.7e-25 119.4 132 55.3
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 2.7e-25 119.4 223 41.3
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 3.5e-25 119.0 189 44.4
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 3.5e-25 119.0 190 45.3
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 1.8e-24 116.7 206 40.8
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 3.0e-24 115.9 182 43.4
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 3.9e-24 115.5 184 40.8
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 3.9e-24 115.5 200 42.0
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 8.7e-24 114.4 182 42.9
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 1.5e-23 113.6 190 44.2
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 1.5e-23 113.6 184 44.6
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 3.3e-23 112.5 202 40.1
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 5.6e-23 111.7 196 42.9
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 9.6e-23 110.9 194 47.4
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 1.3e-22 110.5 189 41.3
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 4.8e-22 108.6 150 50.0
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 1.4e-21 107.1 172 44.2
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 2.4e-21 106.3 185 43.8
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 4.0e-21 105.5 185 40.5
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 6.9e-21 104.8 191 43.5
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 9.0e-21 104.4 225 37.8
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 1.2e-20 104.0 169 42.0
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.2e-20 104.0 184 42.4
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 3.4e-20 102.4 189 43.4
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 3.4e-20 102.4 172 43.6
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 3.4e-20 102.4 174 46.0
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 5.8e-20 101.7 199 40.7
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 5.8e-20 101.7 194 41.2
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 1.0e-19 100.9 239 34.3
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 1.3e-19 100.5 197 41.6
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 1.1e-18 97.4 178 39.9
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 3.2e-18 95.9 168 41.7
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 4.2e-18 95.5 182 42.3
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 9.3e-18 94.4 184 39.7
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 2.1e-17 93.2 176 39.2
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 4.6e-17 92.0 167 39.5
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 7.4e-15 84.7 184 37.5
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 2.1e-14 83.2 237 35.0
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.1e-14 83.2 146 41.1
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 1.2e-12 77.4 210 31.9
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 1.2e-12 77.4 172 37.2
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.0e-11 74.3 37 91.9
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 1.7e-11 73.6 104 45.2
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 2.1e-09 66.6 144 40.3
ATR0317G118 Amborella trichopoda HOM05D007542 ORTHO05D009519 3.9e-08 62.4 60 48.3
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 3.9e-08 62.4 231 26.4
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 6.7e-08 61.6 141 35.5
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 2.5e-07 59.7 60 48.3
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 4.3e-07 58.9 147 32.7


User provided reference genes

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