Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0220100 Rhododendron simsii HOM05D008549 ORTHO05D010234 3.7e-247 857.8 455 100.0
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 5.3e-145 518.5 314 84.7
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 4.4e-123 445.7 304 77.0
Rhsim01G0076100 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.0e-96 355.5 243 76.1
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.1e-81 308.1 298 54.0
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 7.1e-81 305.4 298 53.7
vmacro14701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 6.9e-76 288.9 191 71.2
vmacro14771 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 6.9e-76 288.9 191 71.2
Rhsim01G0162500 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.4e-75 286.2 155 94.2
Rhsim01G0162400 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.6e-75 285.4 151 96.0
RhsimUnG0047100 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.7e-64 250.4 133 94.7
Rhsim04G0237400 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.5e-62 244.6 133 92.5
Rhsim04G0237300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.5e-57 226.1 166 71.1
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.4e-49 201.4 129 76.7
Rhsim12G0160000 Rhododendron simsii HOM05D008549 ORTHO05D030004 2.8e-37 160.6 118 82.2
Rhsim12G0092900 Rhododendron simsii HOM05D009300 ORTHO05D010234 4.1e-36 156.8 290 33.8
vmacro12701 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 1.4e-33 148.3 116 64.7
Rhsim02G0149700 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-29 135.2 124 62.1
Rhsim09G0201400 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.9e-26 124.0 118 62.7
RhsimUnG0192100 Rhododendron simsii HOM05D008549 ORTHO05D000001 6.5e-26 122.9 122 60.7
vmacro12141 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.6e-24 118.2 292 29.1
CSS0005216 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.0e-23 115.5 157 40.8
CSS0029580 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.8e-23 114.8 157 40.1
CSS0037861 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.8e-23 114.8 157 40.1
CSS0039359 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.8e-23 114.8 157 40.1
Rhsim01G0098600 Rhododendron simsii HOM05D008549 ORTHO05D009599 1.8e-23 114.8 76 84.2
Rhsim02G0138000 Rhododendron simsii HOM05D009300 ORTHO05D010234 2.3e-23 114.4 178 37.6
CSS0023015 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 1.1e-22 112.1 158 41.1
Rhsim12G0118200 Rhododendron simsii HOM05D000812 ORTHO05D000672 1.3e-21 108.6 104 61.5
QL04p082690 Quercus lobata HOM05D007798 ORTHO05D009882 1.7e-21 108.2 283 30.7
CSS0027932 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 4.8e-21 106.7 160 38.8
Rhsim09G0134800 Rhododendron simsii HOM05D000001 ORTHO05D000003 8.2e-21 105.9 76 73.7
CSS0037204 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.2e-19 102.1 238 31.9
vmacro12139 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 1.6e-19 101.7 219 29.2
QL05p078054 Quercus lobata HOM05D007798 ORTHO05D009882 2.0e-19 101.3 288 29.2
QL02p083298 Quercus lobata HOM05D007798 ORTHO05D009882 2.6e-19 100.9 285 28.8
Rhsim01G0079600 Rhododendron simsii HOM05D008549 ORTHO05D009599 2.6e-19 100.9 76 73.7
QL05p006610 Quercus lobata HOM05D007798 ORTHO05D009882 4.5e-19 100.1 294 28.9
vmacro00531 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.5e-19 100.1 321 25.9
Rhsim01G0041200 Rhododendron simsii HOM05D000741 ORTHO05D000506 1.0e-18 99.0 66 78.8
Rhsim12G0123800 Rhododendron simsii HOM05D000323 ORTHO05D000201 1.0e-18 99.0 65 80.0
QL05p075545 Quercus lobata HOM05D007798 ORTHO05D009882 1.7e-18 98.2 285 27.7
Rhsim04G0116700 Rhododendron simsii HOM05D008549 ORTHO05D010234 1.7e-18 98.2 47 91.5
vmacro14328 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 3.8e-18 97.1 279 29.0
CSS0047616 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 1.5e-17 95.1 230 30.0
Rhsim03G0038000 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.9e-17 94.7 309 26.5
CSS0010902 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 3.2e-17 94.0 196 35.7
Rhsim11G0057000 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.2e-17 94.0 267 29.6
CSS0007178 Camellia sinensis var. sinensis HOM05D009300 ORTHO05D010234 4.2e-17 93.6 238 30.7
CSS0004305 Camellia sinensis var. sinensis HOM05D017338 ORTHO05D010234 2.1e-16 91.3 121 42.1
Rhsim01G0150700 Rhododendron simsii HOM05D007798 ORTHO05D009882 1.0e-15 89.0 302 27.2
Rhsim10G0126600 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.0e-15 89.0 269 27.9
Rhsim06G0127000 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.0e-15 87.0 272 27.9
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 5.2e-15 86.7 62 74.2
Rhsim06G0076200 Rhododendron simsii HOM05D000107 ORTHO05D009882 9.7e-14 82.4 267 27.7
RhsimUnG0074200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.2e-13 81.3 353 24.9
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.3e-13 79.7 301 25.2
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.3e-13 79.7 301 25.2
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.3e-13 79.7 301 25.2
Rhsim07G0158800 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.3e-13 79.7 292 26.7
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 8.3e-13 79.3 301 24.9
Rhsim01G0156700 Rhododendron simsii HOM05D007798 ORTHO05D009882 8.3e-13 79.3 302 26.8
RhsimUnG0101600 Rhododendron simsii HOM05D009300 ORTHO05D010234 8.3e-13 79.3 258 24.4
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-12 79.0 300 24.3
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.4e-12 78.6 299 24.7
Rhsim11G0014100 Rhododendron simsii HOM05D009300 ORTHO05D010234 5.3e-12 76.6 112 33.0
Rhsim01G0194500 Rhododendron simsii HOM05D000189 ORTHO05D000474 7.0e-12 76.3 40 97.5
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 9.1e-12 75.9 301 24.9
Dinv11320 Davidia involucrata HOM05D000791 ORTHO05D000669 4.2e-09 67.0 270 25.2
Rhsim11G0024200 Rhododendron simsii HOM05D009565 ORTHO05D012252 4.2e-09 67.0 87 34.5
Rhsim04G0140300 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.4e-09 65.9 158 31.0
RhsimUnG0068400 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.4e-09 65.9 158 31.0
Rhsim04G0111400 Rhododendron simsii HOM05D009565 ORTHO05D012252 1.6e-08 65.1 180 25.6
Rhsim01G0102200 Rhododendron simsii HOM05D009565 ORTHO05D012252 3.6e-08 63.9 218 25.2
vmacro13454 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 6.1e-08 63.2 300 22.7
EL10Ac8g19925 Beta vulgaris HOM05D000107 ORTHO05D000062 1.8e-07 61.6 152 29.6
Sed0000006 Sechium edule HOM05D000791 ORTHO05D001863 1.8e-07 61.6 282 24.1
Migut.B01385 Erythranthe guttata HOM05D023261 ORTHO05D000669 3.0e-07 60.8 272 25.7
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 4.0e-07 60.5 279 24.4
FvH4_3g22812 Fragaria vesca HOM05D023520 ORTHO05D025365 3.4e-06 57.4 231 22.1
vmacro13356 Vaccinium macrocarpon HOM05D009300 ORTHO05D010234 4.4e-06 57.0 207 23.2
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 9.8e-06 55.8 215 22.3


User provided reference genes

Program Settings