Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 2.0e-145 519.2 288 100.0
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 1.3e-107 393.7 268 73.5
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 2.8e-107 392.5 268 75.0
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 1.1e-100 370.5 269 71.7
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 3.1e-90 335.9 268 64.2
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 3.1e-90 335.9 268 64.2
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 1.4e-87 327.0 273 61.2
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 3.2e-87 325.9 268 60.1
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 1.6e-86 323.6 268 59.7
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 7.9e-86 321.2 268 61.2
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 8.7e-85 317.8 211 74.4
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 1.1e-84 317.4 273 58.2
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 2.5e-84 316.2 268 59.7
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 1.6e-83 313.5 268 60.4
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 2.1e-83 313.2 268 59.3
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 2.4e-82 309.7 265 60.8
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 5.3e-82 308.5 273 57.9
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 7.6e-81 304.7 269 59.9
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 5.0e-80 302.0 268 57.1
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 6.5e-80 301.6 273 56.4
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 8.5e-80 301.2 270 58.1
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 3.2e-79 299.3 268 55.6
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 7.2e-79 298.1 268 56.7
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 2.7e-78 296.2 269 59.1
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 4.6e-78 295.4 278 55.8
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 7.9e-78 294.7 272 55.1
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 1.8e-77 293.5 268 56.7
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 2.3e-77 293.1 268 54.9
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 3.0e-77 292.7 270 55.6
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 8.7e-77 291.2 268 54.5
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 8.7e-77 291.2 269 55.4
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.1e-76 290.8 268 56.7
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 1.9e-76 290.0 270 56.3
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.9e-76 290.0 273 53.8
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 2.5e-76 289.7 268 56.3
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 2.5e-76 289.7 273 54.9
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 3.3e-76 289.3 270 54.8
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 4.3e-76 288.9 274 54.4
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 7.4e-76 288.1 274 57.3
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 7.4e-76 288.1 270 55.9
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 1.6e-75 287.0 268 55.2
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 1.6e-75 287.0 269 55.4
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 2.8e-75 286.2 268 55.6
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 3.7e-75 285.8 272 56.2
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 6.3e-75 285.0 268 57.1
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 6.3e-75 285.0 268 53.7
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 1.1e-74 284.3 288 53.5
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 1.5e-73 280.4 268 54.1
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 2.6e-73 279.6 268 54.9
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 2.9e-72 276.2 269 52.4
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 3.8e-72 275.8 268 52.2
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 1.1e-71 274.2 268 51.5
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 1.9e-71 273.5 266 54.1
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 1.6e-70 270.4 268 49.3
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 1.6e-70 270.4 269 55.0
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 2.1e-70 270.0 268 51.1
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 2.7e-70 269.6 268 53.7
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 2.7e-70 269.6 265 55.5
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 4.6e-70 268.9 268 50.7
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 4.6e-70 268.9 268 51.5
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 1.4e-69 267.3 268 53.7
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 1.4e-69 267.3 268 50.7
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 2.3e-69 266.5 267 50.2
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 3.0e-69 266.2 268 50.4
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 3.9e-69 265.8 268 54.1
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 5.1e-69 265.4 269 52.4
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 5.1e-69 265.4 198 65.2
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 6.7e-69 265.0 268 53.4
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 8.8e-69 264.6 269 52.8
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 8.8e-69 264.6 269 52.8
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 8.8e-69 264.6 266 51.9
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 1.1e-68 264.2 268 50.4
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 1.1e-68 264.2 273 51.3
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 1.5e-68 263.8 268 51.5
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 2.6e-68 263.1 268 51.5
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 3.3e-68 262.7 269 52.8
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 3.3e-68 262.7 268 52.2
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 4.4e-68 262.3 268 50.4
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 5.7e-68 261.9 269 52.0
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 2.2e-67 260.0 267 52.4
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 4.8e-67 258.8 273 50.9
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 3.1e-66 256.1 275 48.4
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 3.4e-65 252.7 211 59.7
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 2.9e-64 249.6 268 53.0
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 7.2e-63 245.0 199 59.3
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 3.6e-62 242.7 296 44.9
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 3.9e-61 239.2 208 55.3
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 1.8e-58 230.3 268 47.4
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 2.6e-57 226.5 192 57.3
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 6.5e-56 221.9 208 54.8
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 5.7e-52 208.8 273 44.0
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 4.8e-51 205.7 274 44.2
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 7.0e-50 201.8 286 42.0
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 1.3e-48 197.6 265 43.4
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 6.5e-48 195.3 200 51.5
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 8.0e-46 188.3 211 46.9
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 2.6e-44 183.3 203 50.2
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 1.2e-38 164.5 199 43.7
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 1.5e-31 141.0 129 58.1
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.3e-29 133.7 198 41.4
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 8.9e-29 131.7 338 29.6
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 1.2e-28 131.3 192 39.6
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 9.8e-28 128.3 118 51.7
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 6.4e-19 99.0 189 32.8
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 7.3e-15 85.5 120 36.7
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 4.9e-11 72.8 101 37.6
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 4.6e-09 66.2 69 55.1
Medtr0152s0050 Medicago truncatula HOM05D007013 ORTHO05D008999 1.6e-06 57.8 70 40.0


User provided reference genes

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