Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0215000 Rhododendron simsii HOM05D011640 ORTHO05D010391 1.7e-76 289.3 149 100.0
vmacro11741 Vaccinium macrocarpon HOM05D011640 ORTHO05D010391 3.3e-51 205.3 137 75.9
Actinidia32256 Actinidia chinensis HOM05D011640 ORTHO05D010391 5.6e-27 124.8 141 54.6
Actinidia05084 Actinidia chinensis HOM05D011640 ORTHO05D010391 4.9e-15 85.1 100 51.0
Actinidia08341 Actinidia chinensis HOM05D011640 ORTHO05D010391 4.9e-15 85.1 100 51.0
Dinv40772 Davidia involucrata HOM05D009499 ORTHO05D010391 3.9e-12 75.5 71 64.8
Aqoxy4G01859 Aquilegia oxysepala HOM05D032181 ORTHO05D010391 6.7e-12 74.7 142 34.5
CiPaw.12G131500 Carya illinoinensis HOM05D009499 ORTHO05D010391 3.3e-11 72.4 119 38.7
GSVIVG01037677001 Vitis vinifera HOM05D009499 ORTHO05D010391 3.3e-11 72.4 129 34.9
QL08p009388 Quercus lobata HOM05D009499 ORTHO05D010391 1.3e-10 70.5 120 40.0
Cfa020318 Carpinus fangiana HOM05D009499 ORTHO05D010391 1.6e-10 70.1 115 40.9
PSO675G3371 Papaver somniferum HOM05D032181 ORTHO05D010391 1.8e-09 66.6 118 42.4
PSO541G2221 Papaver somniferum HOM05D032181 ORTHO05D010391 2.4e-09 66.2 118 39.8
Gohir.D01G068400 Gossypium hirsutum HOM05D009499 ORTHO05D010391 3.1e-09 65.9 120 40.8
Gorai.002G090400 Gossypium raimondii HOM05D009499 ORTHO05D010391 3.1e-09 65.9 120 40.8
Nitab4.5_0002287g0020 Nicotiana tabacum HOM05D011640 ORTHO05D010391 5.3e-09 65.1 124 38.7
Gohir.A01G081300 Gossypium hirsutum HOM05D009499 ORTHO05D010391 6.9e-09 64.7 120 38.3
TPR.G1202 Trifolium pratense HOM05D009499 ORTHO05D010391 9.0e-09 64.3 120 38.3
Lsat_1_v5_gn_5_2940 Lactuca sativa HOM05D001434 ORTHO05D004586 1.5e-08 63.5 70 48.6
Oeu062582.1 Olea europaea HOM05D011640 ORTHO05D010391 1.5e-08 63.5 66 48.5
Peaxi162Scf00235g00428 Petunia axillaris HOM05D011640 ORTHO05D010391 2.0e-08 63.2 102 43.1
Cc05_g13990 Coffea canephora HOM05D011640 ORTHO05D010391 2.6e-08 62.8 118 37.3
COL.COLO4_09684 Corchorus olitorius HOM05D009499 ORTHO05D010391 4.5e-08 62.0 112 40.2
ECA246G2289 Erigeron canadensis HOM05D011640 ORTHO05D010391 4.5e-08 62.0 101 39.6
Nitab4.5_0000328g0050 Nicotiana tabacum HOM05D011640 ORTHO05D010391 4.5e-08 62.0 124 35.5
Psat0s3384g0080 Pisum sativum HOM05D009499 ORTHO05D010391 4.5e-08 62.0 123 35.0
MSTRG.6933 Avicennia marina HOM05D023005 ORTHO05D010391 1.3e-07 60.5 115 37.4
AUR62020407 Chenopodium quinoa HOM05D038550 ORTHO05D010391 1.7e-07 60.1 149 37.6
Medtr5g093240 Medicago truncatula HOM05D009499 ORTHO05D010391 6.4e-07 58.2 118 36.4
Potri.004G068600 Populus trichocarpa HOM05D009499 ORTHO05D010391 6.4e-07 58.2 107 39.3
Solyc07g064760.2 Solanum lycopersicum HOM05D011640 ORTHO05D010391 6.4e-07 58.2 56 53.6
HanXRQChr05g0159421 Helianthus annuus HOM05D011640 ORTHO05D010391 8.4e-07 57.8 91 38.5
Lalb_Chr04g0248321 Lupinus albus HOM05D009499 ORTHO05D010391 8.4e-07 57.8 117 34.2
Glyma.14G022200 Glycine max HOM05D009499 ORTHO05D010391 1.1e-06 57.4 123 39.0
Nn1g07174 Nelumbo nucifera HOM05D011640 ORTHO05D010391 1.1e-06 57.4 112 38.4
Sopen07g032950 Solanum pennellii HOM05D011640 ORTHO05D010391 1.1e-06 57.4 121 34.7
TWI38G1660 Tripterygium wilfordii HOM05D009499 ORTHO05D010391 1.4e-06 57.0 141 34.8
EL10Ac4g07773 Beta vulgaris HOM05D038550 ORTHO05D010391 1.9e-06 56.6 147 36.1
PGR031G3037 Punica granatum HOM05D009499 ORTHO05D010391 1.9e-06 56.6 162 35.2
Thecc.07G033200 Theobroma cacao HOM05D009499 ORTHO05D010391 4.2e-06 55.5 107 31.8
LjContig00272g0017445 Lotus japonicus HOM05D009499 ORTHO05D010391 5.5e-06 55.1 116 36.2
AUR62015811 Chenopodium quinoa HOM05D038550 ORTHO05D010391 9.3e-06 54.3 149 36.2


User provided reference genes

Program Settings