Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 0.0e+00 1122.5 590 100.0
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 9.6e-272 939.9 595 81.8
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 1.3e-239 833.2 608 74.0
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 2.9e-228 795.4 593 70.5
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.3e-223 780.0 599 68.6
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 4.8e-223 778.1 597 71.7
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 2.1e-218 762.7 598 67.9
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 8.8e-217 757.3 615 66.0
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 8.8e-217 757.3 601 66.9
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 8.8e-217 757.3 552 72.6
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 2.2e-212 742.7 595 67.9
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 9.5e-211 737.3 609 67.0
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 1.2e-208 730.3 606 66.3
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 2.0e-205 719.5 593 63.1
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 5.9e-205 718.0 603 65.3
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 1.3e-204 716.8 603 65.5
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.7e-204 716.5 604 62.7
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 2.9e-204 715.7 630 60.5
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 1.9e-203 713.0 607 64.7
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 3.3e-203 712.2 611 64.3
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 3.3e-203 712.2 603 63.3
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 5.6e-203 711.4 603 66.0
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 9.5e-203 710.7 593 62.2
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 1.6e-202 709.9 593 64.8
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 1.0e-201 707.2 592 62.0
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 3.0e-201 705.7 587 64.1
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 4.0e-201 705.3 604 64.9
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 5.2e-201 704.9 591 64.5
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 6.8e-201 704.5 599 63.3
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 1.2e-200 703.7 610 63.1
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 3.4e-200 702.2 611 59.7
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 7.5e-200 701.0 617 61.1
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 2.2e-199 699.5 608 63.3
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 1.4e-198 696.8 613 63.6
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 2.4e-198 696.0 609 60.4
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 9.2e-198 694.1 605 63.0
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 1.6e-197 693.3 598 60.2
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.5e-197 692.2 603 63.3
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 5.9e-197 691.4 602 63.3
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 4.7e-194 681.8 612 58.3
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 6.2e-194 681.4 617 58.7
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 1.0e-193 680.6 621 59.6
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.0e-193 680.6 610 58.4
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 3.1e-193 679.1 600 58.8
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 5.2e-193 678.3 628 59.1
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 8.9e-193 677.6 594 60.9
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 4.4e-192 675.2 557 60.3
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 5.8e-192 674.9 610 57.9
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 9.8e-192 674.1 614 63.7
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 2.9e-191 672.5 608 59.2
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 6.4e-191 671.4 618 61.2
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 8.3e-191 671.0 619 58.2
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 1.9e-190 669.8 600 61.7
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 3.2e-190 669.1 623 55.5
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 3.2e-190 669.1 539 62.7
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.6e-189 666.8 556 64.4
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 1.6e-189 666.8 488 70.1
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 4.6e-189 665.2 619 58.0
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 4.6e-189 665.2 605 57.9
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 6.0e-189 664.8 616 55.7
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 1.0e-188 664.1 616 61.5
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 1.7e-188 663.3 623 55.1
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.7e-188 663.3 641 55.9
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 3.9e-188 662.1 597 59.6
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 1.9e-187 659.8 602 60.8
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 1.9e-187 659.8 600 57.5
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.5e-187 659.4 554 63.0
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 2.5e-187 659.4 618 57.1
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 5.6e-187 658.3 602 57.6
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 2.8e-186 656.0 592 60.6
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 1.4e-182 643.7 613 58.4
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 1.9e-182 643.3 613 56.3
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 2.4e-182 642.9 619 57.8
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 3.2e-182 642.5 618 57.3
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 5.4e-182 641.7 491 73.7
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 7.1e-182 641.3 619 56.1
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 9.2e-182 641.0 621 56.5
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 9.2e-182 641.0 614 55.5
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 2.1e-181 639.8 609 55.8
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 2.1e-181 639.8 609 55.8
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 3.0e-180 636.0 611 55.3
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 6.6e-180 634.8 589 56.4
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 1.5e-179 633.6 617 55.1
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.6e-178 630.2 610 56.1
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 3.6e-178 629.0 628 57.2
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 4.7e-178 628.6 623 56.0
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 6.2e-178 628.2 474 65.4
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 4.0e-177 625.5 618 55.8
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 4.4e-176 622.1 604 54.6
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 9.2e-174 614.4 539 58.1
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 9.9e-168 594.3 614 54.2
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 8.4e-167 591.3 598 53.8
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.9e-159 566.2 615 53.7
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.4e-158 563.1 642 49.8
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 2.2e-143 513.5 374 64.7
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 1.6e-141 507.3 599 48.4
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 3.0e-140 503.1 384 64.8
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 2.5e-139 500.0 543 49.9
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 1.1e-137 494.6 627 45.9
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 5.7e-131 472.2 416 62.5
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.4e-105 387.1 338 64.5
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 2.1e-101 374.0 339 58.1
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 2.0e-83 314.3 460 37.8
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 2.0e-51 208.0 436 36.9
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 3.4e-51 207.2 454 36.8
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 2.3e-47 194.5 247 40.5
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 2.4e-44 184.5 472 34.3
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 7.6e-43 179.5 443 28.7
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 5.8e-35 153.3 90 75.6
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 1.2e-32 145.6 89 79.8
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.1e-32 144.8 89 71.9
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 6.7e-23 113.2 74 71.6
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 5.7e-22 110.2 70 72.9
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.4e-20 104.8 58 77.6
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 9.0e-20 102.8 62 74.2
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 9.0e-20 102.8 161 32.3
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 8.2e-13 79.7 46 80.4


User provided reference genes

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