Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 6.1e-239 830.5 440 100.0
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 3.0e-137 492.7 430 65.1
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 5.9e-133 478.4 424 63.0
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 7.7e-133 478.0 424 63.0
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 2.3e-108 396.7 316 65.2
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 9.5e-107 391.3 401 54.6
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 9.5e-107 391.3 413 53.5
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 6.8e-105 385.2 379 55.9
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 1.5e-104 384.0 397 53.4
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 2.6e-104 383.3 409 53.8
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 4.4e-104 382.5 416 52.9
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 4.4e-104 382.5 419 52.5
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 7.5e-104 381.7 382 55.2
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 8.3e-103 378.3 321 61.1
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 1.2e-101 374.4 410 50.5
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 2.0e-101 373.6 417 52.0
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 3.5e-101 372.9 417 52.8
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 1.7e-100 370.5 423 50.1
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.7e-100 370.5 411 49.4
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 1.7e-100 370.5 404 52.5
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 5.0e-100 369.0 410 51.5
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 5.0e-100 369.0 420 51.7
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 1.1e-99 367.9 323 59.1
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 1.9e-99 367.1 414 52.2
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 2.5e-99 366.7 417 51.8
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 5.6e-99 365.5 414 50.7
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 5.6e-99 365.5 448 49.6
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 6.2e-98 362.1 367 53.1
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 8.0e-98 361.7 428 49.1
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 1.1e-97 361.3 404 49.3
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 1.1e-97 361.3 323 57.9
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.1e-97 359.8 411 48.7
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 1.2e-96 357.8 353 54.7
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 1.2e-96 357.8 326 55.8
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 1.5e-96 357.5 362 53.6
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 2.6e-96 356.7 305 60.3
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 4.4e-96 355.9 370 53.8
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 5.8e-96 355.5 406 50.2
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 5.8e-96 355.5 413 50.4
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 9.8e-96 354.8 313 58.8
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 2.9e-95 353.2 313 58.8
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 4.9e-95 352.4 324 58.6
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 8.3e-95 351.7 413 51.1
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 8.3e-95 351.7 420 48.8
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 1.1e-94 351.3 405 49.9
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 2.4e-94 350.1 329 56.8
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 2.4e-94 350.1 423 48.9
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 2.4e-94 350.1 307 58.0
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 9.2e-94 348.2 330 55.2
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 1.7e-92 344.0 327 55.7
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 1.9e-91 340.5 404 49.0
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 1.9e-91 340.5 320 56.9
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.9e-91 340.5 412 48.8
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 2.5e-91 340.1 408 49.0
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 3.3e-91 339.7 406 48.8
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 5.6e-91 339.0 322 56.2
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 7.3e-91 338.6 442 46.8
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 7.3e-91 338.6 406 48.3
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 9.5e-91 338.2 401 49.1
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 2.8e-90 336.7 406 49.0
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 3.6e-90 336.3 324 54.0
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 4.7e-90 335.9 307 59.3
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 1.4e-89 334.3 406 48.5
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 2.3e-89 333.6 321 53.9
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 5.2e-89 332.4 404 47.3
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 6.8e-89 332.0 406 48.0
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 6.8e-89 332.0 408 48.5
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 3.4e-88 329.7 324 53.7
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 4.4e-88 329.3 393 48.9
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 4.4e-88 329.3 316 56.3
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 7.6e-88 328.6 409 46.9
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.3e-87 327.8 337 52.2
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.7e-87 327.4 437 45.3
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.7e-87 327.4 398 46.7
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 4.9e-87 325.9 320 53.4
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 1.1e-86 324.7 327 54.1
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 1.1e-86 324.7 327 54.1
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 1.1e-86 324.7 371 48.8
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.9e-86 323.9 426 46.9
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 9.2e-86 321.6 292 55.8
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 6.0e-85 318.9 309 54.4
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 1.7e-84 317.4 303 52.8
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 5.1e-84 315.8 408 46.6
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 5.1e-84 315.8 424 46.5
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 5.1e-84 315.8 296 55.7
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 1.1e-83 314.7 411 44.8
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 5.6e-83 312.4 373 47.7
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 4.7e-82 309.3 302 54.0
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.4e-81 307.8 321 51.1
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 3.1e-81 306.6 397 46.1
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 5.8e-80 302.4 245 62.9
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 1.9e-78 297.4 322 48.4
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 1.0e-76 291.6 400 47.2
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.7e-76 290.8 406 44.1
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 3.3e-75 286.6 250 58.4
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 2.7e-69 266.9 340 44.7
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 1.9e-67 260.8 245 58.0
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 8.1e-66 255.4 245 57.6
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 3.1e-65 253.4 317 43.8
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 7.6e-64 248.8 180 70.6
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 1.1e-57 228.4 336 39.3
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 7.6e-56 222.2 177 68.9
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.2e-53 214.9 273 48.4
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 2.9e-47 193.7 186 53.2
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 4.2e-46 189.9 164 61.6
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 3.9e-44 183.3 181 50.3
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 2.4e-41 174.1 218 39.4
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 5.9e-40 169.5 341 34.3
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 3.8e-39 166.8 271 38.0
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.4e-38 164.9 108 70.4
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 3.9e-36 156.8 222 41.0
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 1.7e-34 151.4 204 45.1
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 2.4e-33 147.5 146 56.2
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 5.3e-33 146.4 206 37.9
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 9.1e-33 145.6 150 52.7
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-32 145.2 150 54.0
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-31 141.7 137 56.2
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 8.5e-31 139.0 150 52.7
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 3.2e-30 137.1 139 54.0
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.7e-29 134.0 173 47.4
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 3.6e-29 133.7 135 54.1
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 3.0e-28 130.6 169 47.3
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 5.1e-28 129.8 179 42.5
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 2.0e-19 101.3 228 29.4
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 1.0e-15 89.0 118 40.7
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 2.2e-07 61.2 110 37.3


User provided reference genes

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