Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 3.0e-66 255.0 124 100.0
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 1.1e-31 140.2 134 63.4
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 6.7e-26 120.9 138 54.3
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 6.7e-26 120.9 138 54.3
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 6.3e-24 114.4 133 55.6
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 8.2e-24 114.0 127 55.1
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 7.7e-22 107.5 130 51.5
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 1.3e-21 106.7 142 49.3
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.3e-21 106.7 142 48.6
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 3.8e-21 105.1 140 50.0
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.8e-21 105.1 134 51.5
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 6.5e-21 104.4 134 51.5
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 6.5e-21 104.4 134 51.5
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 1.1e-20 103.6 143 47.6
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.5e-20 102.4 134 50.7
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 4.2e-20 101.7 132 49.2
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 1.2e-19 100.1 139 47.5
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 2.7e-19 99.0 127 46.5
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 3.6e-19 98.6 132 50.0
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 3.6e-19 98.6 137 49.6
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 3.6e-19 98.6 141 47.5
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 4.7e-19 98.2 134 50.0
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 6.1e-19 97.8 134 49.3
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 8.0e-19 97.4 137 46.0
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 8.0e-19 97.4 149 47.0
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 1.0e-18 97.1 143 47.6
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 1.4e-18 96.7 139 46.8
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 1.4e-18 96.7 128 49.2
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 4.0e-18 95.1 138 45.7
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 5.2e-18 94.7 136 45.6
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 5.2e-18 94.7 145 49.7
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 5.2e-18 94.7 125 50.4
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 6.8e-18 94.4 134 45.5
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 6.8e-18 94.4 130 46.9
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 8.8e-18 94.0 143 45.5
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 8.8e-18 94.0 142 51.4
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 8.8e-18 94.0 133 48.1
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 1.2e-17 93.6 117 46.2
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 1.2e-17 93.6 130 42.3
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 4.4e-17 91.7 130 43.1
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 4.4e-17 91.7 143 44.8
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 4.4e-17 91.7 124 46.0
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 9.8e-17 90.5 117 44.4
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 1.3e-16 90.1 122 48.4
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.7e-16 89.7 117 44.4
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 6.3e-16 87.8 135 46.7
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.1e-15 87.0 127 48.0
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.1e-15 87.0 117 43.6
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 1.1e-15 87.0 135 43.0
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 1.4e-15 86.7 98 53.1
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 2.4e-15 85.9 144 46.5
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 3.1e-15 85.5 118 44.9
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 9.1e-15 84.0 127 47.2
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 1.2e-14 83.6 145 46.9
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 2.7e-14 82.4 140 42.1
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 1.0e-13 80.5 104 47.1
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 2.9e-13 79.0 133 40.6
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 5.0e-13 78.2 121 40.5
Lj4g0016348 Lotus japonicus HOM05D007398 ORTHO05D004912 2.5e-12 75.9 129 37.2
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 3.2e-12 75.5 133 47.4
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 3.2e-12 75.5 129 44.2
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.2e-11 73.6 121 41.3
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 1.2e-11 73.6 119 42.0
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 2.1e-11 72.8 129 44.2
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 2.7e-11 72.4 118 41.5
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 2.7e-11 72.4 149 42.3
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 6.1e-11 71.2 129 39.5
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 8.0e-11 70.9 125 41.6
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 1.4e-10 70.1 110 42.7
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 4.0e-10 68.6 102 47.1
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 5.2e-10 68.2 125 39.2
Potri.006G052300 Populus trichocarpa HOM05D007398 ORTHO05D004912 6.8e-10 67.8 104 42.3
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 1.2e-09 67.0 94 48.9
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 1.5e-09 66.6 126 38.1
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 1.5e-09 66.6 126 38.1
Zm00001eb273730 Zea mays HOM05D007398 ORTHO05D004912 3.4e-09 65.5 132 38.6
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 4.4e-09 65.1 113 44.2
Solyc02g080560.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 5.7e-09 64.7 102 45.1
ATR0794G061 Amborella trichopoda HOM05D007398 ORTHO05D004912 7.5e-09 64.3 140 33.6
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 7.5e-09 64.3 122 38.5
Sopen02g025260 Solanum pennellii HOM05D011575 ORTHO05D004912 7.5e-09 64.3 102 45.1
Haze_06802 Corylus avellana HOM05D061810 ORTHO05D004912 1.3e-08 63.5 90 45.6
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 2.8e-08 62.4 121 38.8
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 4.9e-08 61.6 124 37.1
Zm00001eb207520 Zea mays HOM05D067159 ORTHO05D050012 4.9e-08 61.6 104 40.4
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 1.4e-07 60.1 93 43.0
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 1.4e-07 60.1 124 38.7
SEGI_01426 Sequoiadendron giganteum HOM05D007398 ORTHO05D004912 1.8e-07 59.7 97 39.2
CDE01G0169 Ceratophyllum demersum HOM05D001264 ORTHO05D001167 4.1e-07 58.5 129 36.4
VMungo0647G2151 Vigna mungo HOM05D011727 ORTHO05D004912 5.4e-07 58.2 89 40.4
Medtr8g468960 Medicago truncatula HOM05D011727 ORTHO05D004912 9.2e-07 57.4 91 44.0
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 9.2e-07 57.4 126 34.1
Migut.H01572 Erythranthe guttata HOM05D011575 ORTHO05D004912 1.2e-06 57.0 103 38.8
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 3.5e-06 55.5 127 33.1


User provided reference genes

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