Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0159700 Rhododendron simsii HOM05D002846 ORTHO05D002692 4.4e-71 271.2 135 100.0
RhsimUnG0010900 Rhododendron simsii HOM05D002846 ORTHO05D002692 5.7e-63 244.2 123 100.0
vmacro12218 Vaccinium macrocarpon HOM05D002846 ORTHO05D002692 3.6e-33 145.2 126 65.9
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 3.8e-22 108.6 127 59.8
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 2.6e-15 85.9 126 47.6
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 4.5e-15 85.1 114 51.8
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.1e-13 80.5 109 53.2
CSS0028377 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 1.4e-13 80.1 124 43.5
Dinv02736 Davidia involucrata HOM05D002846 ORTHO05D002692 9.3e-13 77.4 121 46.3
Actinidia09707 Actinidia chinensis HOM05D002846 ORTHO05D002692 2.7e-12 75.9 125 47.2
Potri.002G230300 Populus trichocarpa HOM05D002846 ORTHO05D002692 2.7e-12 75.9 133 44.4
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 2.7e-12 75.9 133 44.4
Lj1A758T10 Lonicera japonica HOM05D002846 ORTHO05D002692 6.0e-12 74.7 109 47.7
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.0e-11 73.9 121 43.8
Lj3g0014799 Lotus japonicus HOM05D002846 ORTHO05D002692 1.3e-11 73.6 125 44.8
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 1.3e-11 73.6 113 46.0
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 3.0e-11 72.4 115 42.6
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 3.9e-11 72.0 129 45.7
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 6.7e-11 71.2 129 43.4
Lalb_Chr24g0393141 Lupinus albus HOM05D002846 ORTHO05D002692 8.7e-11 70.9 113 45.1
Manes.12G075700 Manihot esculenta HOM05D002846 ORTHO05D002692 8.7e-11 70.9 121 40.5
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 8.7e-11 70.9 123 43.1
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 1.1e-10 70.5 121 44.6
Glyma.13G308000 Glycine max HOM05D002846 ORTHO05D002692 1.5e-10 70.1 129 44.2
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 1.5e-10 70.1 135 42.2
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.5e-10 70.1 107 46.7
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 1.5e-10 70.1 111 46.8
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 1.9e-10 69.7 114 44.7
Glyma.06G303502 Glycine max HOM05D002846 ORTHO05D002692 2.5e-10 69.3 115 45.2
Glyma.12G100400 Glycine max HOM05D002846 ORTHO05D002692 2.5e-10 69.3 115 45.2
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 2.5e-10 69.3 106 48.1
Lalb_Chr03g0028801 Lupinus albus HOM05D002846 ORTHO05D002692 3.3e-10 68.9 112 44.6
Nn1g03606 Nelumbo nucifera HOM05D002846 ORTHO05D002692 3.3e-10 68.9 107 48.6
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 4.3e-10 68.6 129 46.5
PGSC0003DMG400005270 Solanum tuberosum HOM05D002846 ORTHO05D002692 5.6e-10 68.2 107 45.8
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 7.4e-10 67.8 112 43.8
HanXRQChr15g0496381 Helianthus annuus HOM05D002846 ORTHO05D002692 9.6e-10 67.4 120 44.2
MD17G1094800 Malus domestica HOM05D002846 ORTHO05D002692 9.6e-10 67.4 109 45.9
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 9.6e-10 67.4 111 43.2
Hma1.2p1_0249F.1_g102340 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.3e-09 67.0 113 41.6
VMungo1080G0378 Vigna mungo HOM05D002846 ORTHO05D002692 2.1e-09 66.2 135 41.5
TWI36G0639 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 2.8e-09 65.9 107 45.8
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 3.7e-09 65.5 111 45.9
Nitab4.5_0000006g0090 Nicotiana tabacum HOM05D002846 ORTHO05D002692 3.7e-09 65.5 111 47.7
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 3.7e-09 65.5 128 43.8
VMungo0971G0001 Vigna mungo HOM05D002846 ORTHO05D002692 3.7e-09 65.5 120 45.0
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 4.8e-09 65.1 130 41.5
FAN05G4571 Fragaria x ananassa HOM05D002846 ORTHO05D002692 4.8e-09 65.1 115 43.5
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 4.8e-09 65.1 131 36.6
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 6.2e-09 64.7 127 40.2
PSO210G5289 Papaver somniferum HOM05D002846 ORTHO05D002692 8.2e-09 64.3 125 39.2
DCAR_019769 Daucus carota HOM05D002846 ORTHO05D002692 1.1e-08 63.9 119 39.5
Oeu041933.1 Olea europaea HOM05D002846 ORTHO05D002692 1.1e-08 63.9 119 42.9
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 1.4e-08 63.5 115 44.3
Sopen12g001770 Solanum pennellii HOM05D002846 ORTHO05D002692 1.4e-08 63.5 131 38.2
Phvul.011G105200 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 1.8e-08 63.2 115 42.6
Solyc12g005820.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 1.8e-08 63.2 131 37.4
Lj3g0002811 Lotus japonicus HOM05D002846 ORTHO05D002692 2.4e-08 62.8 117 42.7
Medtr4g046870 Medicago truncatula HOM05D002846 ORTHO05D002692 2.4e-08 62.8 112 45.5
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 2.4e-08 62.8 140 42.9
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 3.1e-08 62.4 148 39.2
EL10Ac9g20666 Beta vulgaris HOM05D002846 ORTHO05D002692 3.1e-08 62.4 131 40.5
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 3.1e-08 62.4 132 40.2
FAN02G4078 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.1e-08 62.4 120 41.7
Hund01143 Selenicereus undatus HOM05D002846 ORTHO05D002692 3.1e-08 62.4 129 40.3
BcaB06g26277 Brassica carinata HOM05D002846 ORTHO05D002692 4.0e-08 62.0 113 45.1
Lalb_Chr19g0135751 Lupinus albus HOM05D002846 ORTHO05D002692 4.0e-08 62.0 107 45.8
MD09G1107000 Malus domestica HOM05D002846 ORTHO05D002692 4.0e-08 62.0 126 42.1
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 4.0e-08 62.0 110 44.5
PGSC0003DMG400025494 Solanum tuberosum HOM05D002846 ORTHO05D002692 4.0e-08 62.0 110 45.5
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 5.3e-08 61.6 120 40.8
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 5.3e-08 61.6 115 42.6
BcaB04g20571 Brassica carinata HOM05D002846 ORTHO05D002692 6.9e-08 61.2 112 43.8
FAN09G0250 Fragaria x ananassa HOM05D002846 ORTHO05D002692 6.9e-08 61.2 120 41.7
MBI18_g03004_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 6.9e-08 61.2 107 43.9
Nitab4.5_0001176g0060 Nicotiana tabacum HOM05D002846 ORTHO05D002692 6.9e-08 61.2 111 45.0
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 9.0e-08 60.8 136 42.6
Sp3g19720 Schrenkiella parvula HOM05D002846 ORTHO05D002692 9.0e-08 60.8 115 45.2
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.2e-07 60.5 120 40.0
Duzib268G1153 Durio zibethinus HOM05D002846 ORTHO05D002692 1.5e-07 60.1 120 40.0
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.5e-07 60.1 110 40.9
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 1.5e-07 60.1 106 48.1
Peaxi162Scf00462g00005 Petunia axillaris HOM05D002846 ORTHO05D002692 1.5e-07 60.1 117 43.6
A05p27020 Brassica napus HOM05D002846 ORTHO05D002692 2.0e-07 59.7 112 42.9
C05p41700 Brassica napus HOM05D002846 ORTHO05D002692 2.0e-07 59.7 112 43.8
BolC5t32905H Brassica oleracea HOM05D002846 ORTHO05D002692 2.0e-07 59.7 112 43.8
BraA05t21588Z Brassica rapa HOM05D002846 ORTHO05D002692 2.0e-07 59.7 112 42.9
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 2.0e-07 59.7 109 45.0
ECA233G0087 Erigeron canadensis HOM05D002846 ORTHO05D002692 2.0e-07 59.7 117 38.5
Oeu036754.1 Olea europaea HOM05D002846 ORTHO05D002692 2.0e-07 59.7 107 42.1
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 2.0e-07 59.7 139 41.7
BcaC01g03489 Brassica carinata HOM05D002846 ORTHO05D002692 2.6e-07 59.3 116 45.7
A01p33250 Brassica napus HOM05D002846 ORTHO05D002692 2.6e-07 59.3 112 44.6
A03p42420 Brassica napus HOM05D002846 ORTHO05D002692 2.6e-07 59.3 116 45.7
C03p51900 Brassica napus HOM05D002846 ORTHO05D002692 2.6e-07 59.3 116 45.7
BolC3t17475H Brassica oleracea HOM05D002846 ORTHO05D002692 2.6e-07 59.3 116 45.7
BraA01t03443Z Brassica rapa HOM05D002846 ORTHO05D002692 2.6e-07 59.3 112 44.6
BraA03t13394Z Brassica rapa HOM05D002846 ORTHO05D002692 2.6e-07 59.3 116 45.7
Carub.0003s2176 Capsella rubella HOM05D002846 ORTHO05D002692 2.6e-07 59.3 108 43.5
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 2.6e-07 59.3 114 43.0
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 3.4e-07 58.9 108 43.5
Nitab4.5_0001884g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 3.4e-07 58.9 106 45.3
RcHm_v2.0_Chr2g0159761 Rosa chinensis HOM05D002846 ORTHO05D002692 4.5e-07 58.5 120 39.2
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 5.8e-07 58.2 108 43.5
EL10Ac4g07933 Beta vulgaris HOM05D019198 ORTHO05D002692 5.8e-07 58.2 129 34.9
BcaC05g28139 Brassica carinata HOM05D002846 ORTHO05D002692 5.8e-07 58.2 111 43.2
CiPaw.11G185800 Carya illinoinensis HOM05D002846 ORTHO05D002692 5.8e-07 58.2 112 40.2
Thhalv10021505m.g Eutrema salsugineum HOM05D002846 ORTHO05D002692 5.8e-07 58.2 116 41.4
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 5.8e-07 58.2 116 37.1
Gorai.005G150200 Gossypium raimondii HOM05D002846 ORTHO05D002692 5.8e-07 58.2 107 43.0
MBI02_g23957_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 5.8e-07 58.2 107 42.1
Prupe.3G218700 Prunus persica HOM05D002846 ORTHO05D002692 5.8e-07 58.2 110 43.6
BcaB04g19182 Brassica carinata HOM05D002846 ORTHO05D002692 7.6e-07 57.8 116 44.0
CiPaw.04G116900 Carya illinoinensis HOM05D002846 ORTHO05D002692 1.0e-06 57.4 129 42.6
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 1.0e-06 57.4 120 39.2
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 1.3e-06 57.0 108 41.7
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.7e-06 56.6 110 40.9
C01p42460 Brassica napus HOM05D002846 ORTHO05D002692 2.2e-06 56.2 112 43.8
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 2.2e-06 56.2 110 40.9
Actinidia05119 Actinidia chinensis HOM05D002846 ORTHO05D002692 2.9e-06 55.8 114 39.5
Nitab4.5_0002083g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.9e-06 55.8 109 44.0
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 2.9e-06 55.8 119 40.3
Ca_26241_v3 Cicer arietinum L. HOM05D002846 ORTHO05D002692 3.8e-06 55.5 114 41.2
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 3.8e-06 55.5 111 44.1
Phvul.011G136900 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 3.8e-06 55.5 119 39.5
Sed0021551 Sechium edule HOM05D002846 ORTHO05D002692 3.8e-06 55.5 142 33.1
CAN.G1151.1 Capsicum annuum HOM05D002846 ORTHO05D002692 4.9e-06 55.1 121 43.0
CiPaw.11G185600 Carya illinoinensis HOM05D002846 ORTHO05D002692 4.9e-06 55.1 112 38.4
PGR042G0859 Punica granatum HOM05D002846 ORTHO05D002692 4.9e-06 55.1 112 40.2
CARHR097660 Cardamine hirsuta HOM05D002846 ORTHO05D002692 6.5e-06 54.7 111 40.5
Peaxi162Scf00407g00210 Petunia axillaris HOM05D002846 ORTHO05D002692 6.5e-06 54.7 118 39.8
QL08p033485 Quercus lobata HOM05D002846 ORTHO05D002692 6.5e-06 54.7 118 40.7
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 6.5e-06 54.7 119 41.2
TWI39G1011 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 6.5e-06 54.7 120 38.3
HPP92_004138 Vanilla planifolia HOM05D002846 ORTHO05D002692 6.5e-06 54.7 116 42.2
VMungo1127G2104 Vigna mungo HOM05D002846 ORTHO05D002692 8.4e-06 54.3 115 39.1


User provided reference genes

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