Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0147900 Rhododendron simsii HOM05D066857 ORTHO05D000041 8.4e-137 490.3 246 100.0
Rhsim06G0148100 Rhododendron simsii HOM05D000325 ORTHO05D000583 1.9e-27 127.1 80 85.0
Rhsim06G0147300 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.0e-25 121.3 80 78.8
vmacro12276 Vaccinium macrocarpon HOM05D000325 ORTHO05D000583 8.7e-25 118.2 80 75.0
Rhsim09G0086900 Rhododendron simsii HOM05D066857 ORTHO05D339524 1.2e-21 107.8 66 84.8
vmacro12272 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 2.0e-21 107.1 80 71.2
vmacro12278 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 2.3e-17 93.6 67 70.1
vmacro12236 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 8.7e-17 91.7 79 59.5
CSS0021032 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D000583 8.1e-15 85.1 72 63.9
CSS0026601 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 1.8e-14 84.0 62 64.5
Rhsim06G0147800 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.4e-14 83.6 82 54.9
vmacro12277 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 3.1e-14 83.2 78 59.0
Rhsim06G0147500 Rhododendron simsii HOM05D000097 ORTHO05D000041 6.9e-14 82.0 82 53.7
Rhsim06G0147700 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.2e-12 77.0 82 51.2
CSS0025841 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 1.9e-11 73.9 66 53.0
Dinv23672 Davidia involucrata HOM05D000097 ORTHO05D000041 4.2e-11 72.8 71 47.9
Dinv23670 Davidia involucrata HOM05D000097 ORTHO05D000041 5.5e-11 72.4 139 32.4
Oeu048165.1 Olea europaea HOM05D000325 ORTHO05D000583 2.1e-10 70.5 47 70.2
Hma1.2p1_2179F.1_g316220 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 2.7e-10 70.1 91 47.3
Dinv12911 Davidia involucrata HOM05D000325 ORTHO05D000583 4.6e-10 69.3 91 46.2
CSS0041661 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 1.0e-09 68.2 76 43.4
Dinv13945 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-09 67.8 62 51.6
Hma1.2p1_0875F.1_g231340 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.8e-09 67.4 68 47.1
Hma1.2p1_0875F.1_g231360 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 2.3e-09 67.0 103 40.8
Oeu029932.1 Olea europaea HOM05D000325 ORTHO05D000583 1.1e-08 64.7 47 61.7
Dinv13946 Davidia involucrata HOM05D000097 ORTHO05D000041 4.3e-08 62.8 62 45.2
Dinv23668 Davidia involucrata HOM05D000097 ORTHO05D000041 7.4e-08 62.0 60 51.7
Dinv23674 Davidia involucrata HOM05D000097 ORTHO05D000041 7.4e-08 62.0 65 47.7
Dinv23673 Davidia involucrata HOM05D000097 ORTHO05D000041 9.6e-08 61.6 60 51.7
Dinv13944 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-07 61.2 79 44.3
Hma1.2p1_0875F.1_g231350 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.3e-07 61.2 68 44.1
Hma1.2p1_1176F.1_g264290 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.3e-07 61.2 68 44.1
Hma1.2p1_1475F.1_g285780 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 1.6e-07 60.8 68 44.1
Dinv20111 Davidia involucrata HOM05D000097 ORTHO05D000041 2.1e-07 60.5 62 40.3
Dinv20112 Davidia involucrata HOM05D000097 ORTHO05D000041 2.1e-07 60.5 57 45.6
Lsat_1_v5_gn_4_61781 Lactuca sativa HOM05D000097 ORTHO05D000041 4.8e-07 59.3 75 41.3
Lj8A114G38 Lonicera japonica HOM05D000325 ORTHO05D000583 4.8e-07 59.3 52 57.7
DCAR_027551 Daucus carota HOM05D000097 ORTHO05D000041 8.1e-07 58.5 69 44.9
Actinidia11052 Actinidia chinensis HOM05D000325 ORTHO05D000583 1.1e-06 58.2 93 40.9
Cfa000150 Carpinus fangiana HOM05D000097 ORTHO05D000041 1.1e-06 58.2 72 41.7
HanXRQChr17g0558831 Helianthus annuus HOM05D000097 ORTHO05D000041 1.1e-06 58.2 80 37.5
Peaxi162Scf00132g00525 Petunia axillaris HOM05D000325 ORTHO05D000583 1.8e-06 57.4 45 57.8
Migut.H01064 Erythranthe guttata HOM05D000325 ORTHO05D000583 2.4e-06 57.0 44 63.6
CAN.G248.40 Capsicum annuum HOM05D000325 ORTHO05D000583 4.0e-06 56.2 45 53.3
Potri.006G281700 Populus trichocarpa HOM05D000097 ORTHO05D000041 5.3e-06 55.8 57 49.1
Potri.011G016200 Populus trichocarpa HOM05D000097 ORTHO05D000041 5.3e-06 55.8 57 49.1
Cfa000149 Carpinus fangiana HOM05D000097 ORTHO05D000041 6.9e-06 55.5 115 28.7
Lsat_1_v5_gn_7_15241 Lactuca sativa HOM05D000097 ORTHO05D000041 9.0e-06 55.1 63 41.3
Potri.006G281600 Populus trichocarpa HOM05D000097 ORTHO05D000041 9.0e-06 55.1 57 45.6
Potri.011G016300 Populus trichocarpa HOM05D000097 ORTHO05D000041 9.0e-06 55.1 57 45.6


User provided reference genes

Program Settings