Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0147600 Rhododendron simsii HOM05D007230 ORTHO05D022123 3.5e-86 321.6 165 100.0
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.2e-76 288.5 164 92.1
Rhsim05G0139800 Rhododendron simsii HOM05D007230 ORTHO05D004756 9.8e-73 276.9 166 87.3
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.3e-61 239.2 164 77.4
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 7.8e-54 214.2 164 75.6
Rhsim11G0119100 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.3e-53 213.4 112 92.0
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.6e-27 125.6 160 48.8
CSS0016168 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-25 120.6 166 48.2
CSS0043112 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-25 120.6 166 48.2
CSS0024569 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.0e-25 119.8 166 48.2
CSS0042753 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 3.4e-25 119.0 166 47.6
Rhsim04G0107400 Rhododendron simsii HOM05D007230 ORTHO05D004756 2.1e-22 109.8 159 45.3
Rhsim08G0173500 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.6e-14 83.6 146 40.4
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 3.9e-13 79.0 96 46.9
CSS0015235 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 7.4e-12 74.7 130 41.5
CSS0045907 Camellia sinensis var. sinensis HOM05D001396 ORTHO05D000493 1.6e-11 73.6 130 41.5
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.8e-11 72.0 101 41.6
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 5.3e-10 68.6 106 39.6
Rhsim11G0089400 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.0e-08 64.3 49 67.3
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 2.9e-08 62.8 53 60.4
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 2.9e-08 62.8 139 36.7
Psat2g117040 Pisum sativum HOM05D007230 ORTHO05D004756 2.9e-08 62.8 53 60.4
Psat5g096840 Pisum sativum HOM05D007230 ORTHO05D004756 3.8e-08 62.4 53 58.5
SHI02490 Sapria himalayana HOM05D000002 ORTHO05D000001 8.4e-08 61.2 73 49.3
CSS0004716 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 1.1e-07 60.8 41 75.6
Psat5g083840 Pisum sativum HOM05D007230 ORTHO05D004756 1.9e-07 60.1 50 60.0
COL.COLO4_04631 Corchorus olitorius HOM05D007230 ORTHO05D022123 3.2e-07 59.3 123 37.4
COL.COLO4_28935 Corchorus olitorius HOM05D007230 ORTHO05D004756 4.2e-07 58.9 108 32.4
SHI41657 Sapria himalayana HOM05D000002 ORTHO05D004756 5.5e-07 58.5 89 38.2
CSS0042954 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 7.1e-07 58.2 62 59.7
SHI11692 Sapria himalayana HOM05D000002 ORTHO05D000001 7.1e-07 58.2 89 38.2
SHI45862 Sapria himalayana HOM05D007230 ORTHO05D004756 7.1e-07 58.2 89 38.2
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-07 57.8 89 38.2
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 9.3e-07 57.8 89 38.2
SHI12633 Sapria himalayana HOM05D000002 ORTHO05D004756 1.2e-06 57.4 89 38.2
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 1.2e-06 57.4 89 37.1
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 57.4 89 38.2
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 1.6e-06 57.0 89 38.2
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 57.0 89 38.2
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-06 56.6 119 31.9
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 2.1e-06 56.6 119 31.9
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 56.6 89 37.1
SHI17244 Sapria himalayana HOM05D007230 ORTHO05D004756 2.1e-06 56.6 88 36.4
PSO675G6160 Papaver somniferum HOM05D000002 ORTHO05D004756 3.5e-06 55.8 86 39.5
CSS0005903 Camellia sinensis var. sinensis HOM05D029954 ORTHO05D022123 4.6e-06 55.5 62 56.5
MELO3C029836.2 Cucumis melo HOM05D007230 ORTHO05D004756 4.6e-06 55.5 130 29.2
SHI03218 Sapria himalayana HOM05D007230 ORTHO05D004756 4.6e-06 55.5 55 52.7
SHI11549 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-06 55.5 89 37.1
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 6.0e-06 55.1 55 50.9
CAN.G183.8 Capsicum annuum HOM05D007908 ORTHO05D009653 7.9e-06 54.7 99 35.4
MELO3C030315.2 Cucumis melo HOM05D007230 ORTHO05D004756 7.9e-06 54.7 56 51.8
QL08p048522 Quercus lobata HOM05D000002 ORTHO05D000001 7.9e-06 54.7 65 47.7
SHI29623 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-06 54.7 88 36.4


User provided reference genes

Program Settings