Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0145500 Rhododendron simsii HOM05D000264 ORTHO05D000152 4.3e-79 298.1 172 100.0
Rhsim06G0144800 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.6e-78 296.2 172 99.4
Rhsim06G0144600 Rhododendron simsii HOM05D000264 ORTHO05D000152 6.7e-32 141.4 107 78.5
Rhsim06G0145300 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.2e-26 122.5 95 75.8
Dinv23656 Davidia involucrata HOM05D000264 ORTHO05D000152 4.2e-18 95.5 106 57.5
Actinidia11042 Actinidia chinensis HOM05D000264 ORTHO05D000152 2.7e-17 92.8 107 54.2
CSS0049254 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 8.8e-16 87.8 101 50.5
Dinv01341 Davidia involucrata HOM05D000264 ORTHO05D000152 8.2e-14 81.3 101 49.5
Dinv02176 Davidia involucrata HOM05D000264 ORTHO05D000152 8.2e-14 81.3 101 49.5
Actinidia11041 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.1e-13 80.9 53 71.7
CSS0000780 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.1e-13 79.3 99 46.5
CSS0018607 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.1e-13 79.3 99 46.5
Prupe.3G153800 Prunus persica HOM05D000264 ORTHO05D000152 3.1e-13 79.3 106 45.3
QL08p039639 Quercus lobata HOM05D000264 ORTHO05D000152 3.1e-13 79.3 99 46.5
Migut.H01079 Erythranthe guttata HOM05D000264 ORTHO05D000152 1.5e-12 77.0 135 40.0
FAN18G1722 Fragaria x ananassa HOM05D000264 ORTHO05D000152 1.5e-12 77.0 152 42.1
Hma1.2p1_0213F.1_g090340 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 2.0e-12 76.6 107 45.8
QL08p038422 Quercus lobata HOM05D000264 ORTHO05D000152 7.7e-12 74.7 99 44.4
Actinidia11043 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.0e-11 74.3 142 37.3
Prupe.3G135100 Prunus persica HOM05D000264 ORTHO05D000152 1.7e-11 73.6 101 46.5
GSVIVG01030360001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.2e-11 73.2 106 49.1
Dinv26423 Davidia involucrata HOM05D000264 ORTHO05D000152 3.8e-11 72.4 142 38.7
Hma1.2p1_0213F.1_g090330 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 8.5e-11 71.2 107 43.0
GSVIVG01030366001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.1e-10 70.9 106 48.1
CSS0035240 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.4e-10 70.5 105 42.9
Sc12g0002970 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.4e-10 70.5 97 46.4
vmacro12288 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.4e-10 70.5 150 34.7
GSVIVG01030362001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.9e-10 70.1 106 48.1
GSVIVG01030371001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.9e-10 70.1 106 48.1
GSVIVG01030372001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.9e-10 70.1 106 41.5
QL01p006033 Quercus lobata HOM05D000264 ORTHO05D000152 2.5e-10 69.7 106 41.5
Migut.D00741 Erythranthe guttata HOM05D000264 ORTHO05D000152 3.2e-10 69.3 96 43.8
Migut.H01080 Erythranthe guttata HOM05D000264 ORTHO05D000152 3.2e-10 69.3 99 42.4
FvH4_3g05910 Fragaria vesca HOM05D000264 ORTHO05D000152 4.2e-10 68.9 100 47.0
GSVIVG01020519001 Vitis vinifera HOM05D000264 ORTHO05D000152 4.2e-10 68.9 106 47.2
TWI36G1112 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 7.2e-10 68.2 103 39.8
vmacro12293 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 7.2e-10 68.2 147 35.4
GSVIVG01020530001 Vitis vinifera HOM05D000264 ORTHO05D000152 7.2e-10 68.2 99 47.5
Prupe.3G135700 Prunus persica HOM05D000264 ORTHO05D000152 9.4e-10 67.8 104 45.2
Sc16g0001410 Simmondsia chinensis HOM05D000264 ORTHO05D000152 9.4e-10 67.8 97 40.2
Cc05_g06990 Coffea canephora HOM05D000264 ORTHO05D000152 1.6e-09 67.0 140 36.4
Migut.H01077 Erythranthe guttata HOM05D000264 ORTHO05D000152 1.6e-09 67.0 99 44.4
DCAR_014775 Daucus carota HOM05D000264 ORTHO05D000152 2.1e-09 66.6 106 41.5
Cc05_g07000 Coffea canephora HOM05D000264 ORTHO05D000152 2.7e-09 66.2 97 45.4
Lj1C726T14 Lonicera japonica HOM05D000264 ORTHO05D000152 3.6e-09 65.9 142 34.5
TAR624G0104 Trochodendron aralioides HOM05D000264 ORTHO05D000152 3.6e-09 65.9 107 39.3
vmacro22813 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 3.6e-09 65.9 109 39.4
vmacro12290 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 4.7e-09 65.5 147 35.4
vmacro22812 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 4.7e-09 65.5 147 35.4
AT4G03460 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 8.0e-09 64.7 101 41.6
CSS0014264 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 8.0e-09 64.7 96 44.8
Rhsim06G0145700 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.0e-09 64.7 56 91.1
TAR624G1302 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.0e-08 64.3 104 40.4
vmacro12289 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.0e-08 64.3 105 37.1
vmacro22811 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.0e-08 64.3 105 37.1
Rhsim06G0144100 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.4e-08 63.9 106 37.7
Dinv02172 Davidia involucrata HOM05D000264 ORTHO05D000152 1.8e-08 63.5 99 45.5
Dinv02174 Davidia involucrata HOM05D000264 ORTHO05D000152 2.3e-08 63.2 99 45.5
Thecc.02G180600 Theobroma cacao HOM05D000264 ORTHO05D000152 2.3e-08 63.2 99 45.5
vmacro12291 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 2.3e-08 63.2 109 38.5
ECA246G1346 Erigeron canadensis HOM05D000264 ORTHO05D000152 3.0e-08 62.8 98 42.9
AT4G03500 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 5.2e-08 62.0 101 39.6
GSVIVG01030367001 Vitis vinifera HOM05D000264 ORTHO05D000152 6.7e-08 61.6 106 44.3
Lj2g0023266 Lotus japonicus HOM05D000264 ORTHO05D000152 8.8e-08 61.2 92 43.5
GSVIVG01020517001 Vitis vinifera HOM05D000264 ORTHO05D000152 8.8e-08 61.2 106 43.4
CARHR251900 Cardamine hirsuta HOM05D000264 ORTHO05D000001 1.1e-07 60.8 100 41.0
QL02p056100 Quercus lobata HOM05D000264 ORTHO05D000152 1.1e-07 60.8 106 38.7
QL05p018838 Quercus lobata HOM05D000264 ORTHO05D000152 1.1e-07 60.8 106 38.7
Lj2g0018878 Lotus japonicus HOM05D000264 ORTHO05D000152 1.5e-07 60.5 92 44.6
RcHm_v2.0_Chr5g0041111 Rosa chinensis HOM05D000264 ORTHO05D000152 1.5e-07 60.5 154 37.0
Cpa.g.sc34.145 Carica papaya HOM05D000264 ORTHO05D000152 2.6e-07 59.7 100 40.0
QL05p018975 Quercus lobata HOM05D000264 ORTHO05D000152 2.6e-07 59.7 106 37.7
VMungo1080G1027 Vigna mungo HOM05D000264 ORTHO05D000152 2.6e-07 59.7 89 42.7
Carub.0006s3361 Capsella rubella HOM05D000264 ORTHO05D000152 3.3e-07 59.3 100 41.0
CSS0028437 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 4.4e-07 58.9 97 43.3
Sc12g0002980 Simmondsia chinensis HOM05D000264 ORTHO05D000152 4.4e-07 58.9 45 55.6
GSVIVG01030361001 Vitis vinifera HOM05D000264 ORTHO05D000152 4.4e-07 58.9 105 42.9
Aa31LG5G2890 Aethionema arabicum HOM05D000264 ORTHO05D000152 5.7e-07 58.5 98 38.8
Rhsim06G0144700 Rhododendron simsii HOM05D000264 ORTHO05D000152 9.7e-07 57.8 105 36.2
Rhsim06G0145400 Rhododendron simsii HOM05D000264 ORTHO05D000152 9.7e-07 57.8 105 36.2
Lj2g0006846 Lotus japonicus HOM05D000264 ORTHO05D000152 2.2e-06 56.6 52 50.0
Phvul.005G046201 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 2.2e-06 56.6 89 39.3
Rhsim06G0144200 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.2e-06 56.6 106 38.7
Rhsim06G0145000 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.2e-06 56.6 106 38.7
Lalb_Chr20g0108371 Lupinus albus HOM05D000264 ORTHO05D000152 2.8e-06 56.2 96 40.6
HanXRQChr06g0174631 Helianthus annuus HOM05D000264 ORTHO05D000152 3.7e-06 55.8 88 45.5
Phvul.005G046800 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 3.7e-06 55.8 89 40.4
QL04p023639 Quercus lobata HOM05D000264 ORTHO05D000152 3.7e-06 55.8 106 38.7
GSVIVG01030363001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.7e-06 55.8 105 41.9
Hma1.2p1_0213F.1_g090350 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 4.8e-06 55.5 96 40.6
TWI36G0414 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 4.8e-06 55.5 51 47.1
vmacro12287 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 4.8e-06 55.5 98 38.8
Medtr5g085480 Medicago truncatula HOM05D000264 ORTHO05D000152 6.3e-06 55.1 92 39.1
Phvul.005G046300 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 6.3e-06 55.1 106 37.7
QL04p024009 Quercus lobata HOM05D000264 ORTHO05D000152 6.3e-06 55.1 106 38.7
GSVIVG01020527001 Vitis vinifera HOM05D000264 ORTHO05D000152 6.3e-06 55.1 98 38.8
Medtr5g085500 Medicago truncatula HOM05D009796 ORTHO05D000152 8.2e-06 54.7 105 33.3


User provided reference genes

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