Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0142800 Rhododendron simsii HOM05D000016 ORTHO05D339309 1.8e-50 202.2 99 100.0
Rhsim08G0162100 Rhododendron simsii HOM05D000016 ORTHO05D000109 9.2e-34 146.7 85 85.9
Rhsim05G0102000 Rhododendron simsii HOM05D000160 ORTHO05D001344 1.1e-10 70.1 49 71.4
Actinidia28032 Actinidia chinensis HOM05D000160 ORTHO05D001344 5.4e-10 67.8 49 69.4
vmacro19956 Vaccinium macrocarpon HOM05D000160 ORTHO05D001344 6.0e-09 64.3 54 59.3
Actinidia04422 Actinidia chinensis HOM05D000160 ORTHO05D001344 1.0e-08 63.5 49 65.3
Sc18g0007050 Simmondsia chinensis HOM05D000160 ORTHO05D001344 1.1e-07 60.1 49 65.3
CSS0011151 Camellia sinensis var. sinensis HOM05D000160 ORTHO05D001344 2.5e-07 58.9 39 66.7
CSS0033193 Camellia sinensis var. sinensis HOM05D000160 ORTHO05D001344 2.5e-07 58.9 39 66.7
vmacro01855 Vaccinium macrocarpon HOM05D000160 ORTHO05D001344 4.3e-07 58.2 50 58.0
Ah.01g023990 Amaranthus hybridus HOM05D000160 ORTHO05D001344 5.6e-07 57.8 49 61.2
Prupe.8G069000 Prunus persica HOM05D000160 ORTHO05D001344 5.6e-07 57.8 49 57.1
Actinidia24017 Actinidia chinensis HOM05D000160 ORTHO05D001344 9.5e-07 57.0 49 59.2
CANSAT54G1022 Cannabis sativa HOM05D000160 ORTHO05D001344 9.5e-07 57.0 49 57.1
MD10G1054200 Malus domestica HOM05D000160 ORTHO05D001344 1.2e-06 56.6 38 63.2
Rhsim11G0144200 Rhododendron simsii HOM05D000160 ORTHO05D001344 1.2e-06 56.6 49 59.2
Sc14g0003450 Simmondsia chinensis HOM05D000160 ORTHO05D001344 1.6e-06 56.2 49 59.2
AUR62012890 Chenopodium quinoa HOM05D000160 ORTHO05D001344 2.1e-06 55.8 49 59.2
AUR62027114 Chenopodium quinoa HOM05D000160 ORTHO05D001344 2.1e-06 55.8 49 59.2
GSVIVG01015639001 Vitis vinifera HOM05D000160 ORTHO05D001344 2.1e-06 55.8 60 53.3
AL6G19940 Arabidopsis lyrata HOM05D000160 ORTHO05D001344 2.8e-06 55.5 36 72.2
EL10Ac9g22076 Beta vulgaris HOM05D000160 ORTHO05D001344 3.6e-06 55.1 49 57.1


User provided reference genes

Program Settings