Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0142500 Rhododendron simsii HOM05D001108 ORTHO05D005418 4.5e-155 551.2 278 100.0
vmacro12300 Vaccinium macrocarpon HOM05D001108 ORTHO05D005418 5.2e-127 458.0 284 85.9
CSS0002926 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.7e-109 399.8 280 76.8
CSS0042510 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.1e-108 397.1 280 76.4
CSS0039738 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 2.7e-107 392.5 288 74.0
CSS0044059 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.3e-106 390.2 273 76.9
QL08p038694 Quercus lobata HOM05D001108 ORTHO05D005418 1.6e-99 366.7 285 70.9
TAR627G0387 Trochodendron aralioides HOM05D001108 ORTHO05D005418 1.3e-96 357.1 287 66.6
Atru.chr6.2997 Acer truncatum HOM05D001108 ORTHO05D005418 1.1e-95 354.0 276 68.1
Ciclev10013903m.g Citrus clementina HOM05D001108 ORTHO05D005418 1.5e-94 350.1 276 68.8
Haze_21052 Corylus avellana HOM05D001108 ORTHO05D001619 5.8e-94 348.2 282 68.8
HanXRQChr06g0171321 Helianthus annuus HOM05D001108 ORTHO05D005418 1.7e-93 346.7 282 68.4
Sopen07g028120 Solanum pennellii HOM05D001108 ORTHO05D005418 6.4e-93 344.7 277 67.5
Nn1g04079 Nelumbo nucifera HOM05D001108 ORTHO05D005418 8.4e-93 344.4 241 73.4
Solyc07g054190.4 Solanum lycopersicum HOM05D001108 ORTHO05D005418 8.4e-93 344.4 260 70.4
HanXRQChr06g0171311 Helianthus annuus HOM05D001108 ORTHO05D005418 1.1e-92 344.0 285 66.7
Thecc.05G172000 Theobroma cacao HOM05D001108 ORTHO05D005418 3.2e-92 342.4 279 66.7
Cpa.g.sc34.160 Carica papaya HOM05D001108 ORTHO05D005418 4.2e-92 342.0 273 68.9
COL.COLO4_33977 Corchorus olitorius HOM05D001108 ORTHO05D005418 4.2e-92 342.0 278 65.8
Prupe.3G137500 Prunus persica HOM05D001108 ORTHO05D005418 9.3e-92 340.9 279 64.9
Gohir.A09G128300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 1.2e-91 340.5 279 64.9
CANSAT80G2367 Cannabis sativa HOM05D001108 ORTHO05D005418 2.1e-91 339.7 284 64.8
EL10Ac9g20764 Beta vulgaris HOM05D001108 ORTHO05D005418 2.7e-91 339.3 280 65.7
Migut.C01348 Erythranthe guttata HOM05D001108 ORTHO05D005418 2.7e-91 339.3 260 70.4
Gohir.D09G124300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 3.5e-91 339.0 259 68.0
Gorai.006G143100 Gossypium raimondii HOM05D001108 ORTHO05D005418 4.6e-91 338.6 259 68.0
MD09G1247800 Malus domestica HOM05D001108 ORTHO05D005418 7.9e-91 337.8 281 64.8
CiPaw.04G125800 Carya illinoinensis HOM05D001108 ORTHO05D005418 1.0e-90 337.4 290 65.2
Hund07929 Selenicereus undatus HOM05D001108 ORTHO05D005418 1.3e-90 337.0 276 64.9
Sc21g0002830 Simmondsia chinensis HOM05D001108 ORTHO05D005418 2.3e-90 336.3 263 70.3
Manes.13G146800 Manihot esculenta HOM05D001108 ORTHO05D005418 3.9e-90 335.5 247 71.7
Lsat_1_v5_gn_3_37280 Lactuca sativa HOM05D001108 ORTHO05D005418 5.1e-90 335.1 214 78.5
PSO478G1555 Papaver somniferum HOM05D001108 ORTHO05D005418 6.7e-90 334.7 281 64.1
AUR62036092 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.9e-89 333.2 264 65.5
MD17G1240700 Malus domestica HOM05D001108 ORTHO05D005418 3.3e-89 332.4 272 65.4
Potri.019G100500 Populus trichocarpa HOM05D001108 ORTHO05D005418 3.3e-89 332.4 282 66.0
SalBow1G0161 Salvia bowleyana HOM05D001108 ORTHO05D005418 3.3e-89 332.4 248 69.4
Duzib093G1006 Durio zibethinus HOM05D001108 ORTHO05D005418 4.3e-89 332.0 219 75.3
TWI75G0959 Tripterygium wilfordii HOM05D001108 ORTHO05D005418 4.3e-89 332.0 291 63.2
MSTRG.5628 Avicennia marina HOM05D001108 ORTHO05D005418 7.4e-89 331.3 244 71.3
PSO675G3815 Papaver somniferum HOM05D001108 ORTHO05D005418 7.4e-89 331.3 281 63.3
PSO541G4613 Papaver somniferum HOM05D001108 ORTHO05D005418 1.3e-88 330.5 281 63.0
Lalb_Chr03g0029441 Lupinus albus HOM05D001108 ORTHO05D005418 1.6e-88 330.1 237 70.5
Ah.01g015170 Amaranthus hybridus HOM05D001108 ORTHO05D005418 2.1e-88 329.7 223 74.0
PSO782G4551 Papaver somniferum HOM05D001108 ORTHO05D005418 2.1e-88 329.7 282 62.8
AUR62019549 Chenopodium quinoa HOM05D001108 ORTHO05D005418 2.8e-88 329.3 282 61.7
Nitab4.5_0000512g0050 Nicotiana tabacum HOM05D001108 ORTHO05D005418 3.7e-88 328.9 237 71.3
Sabra19G0110800 Salix brachista HOM05D001108 ORTHO05D005418 4.8e-88 328.6 281 65.5
Sabra19G0112200 Salix brachista HOM05D001108 ORTHO05D005418 4.8e-88 328.6 281 65.5
Nitab4.5_0004071g0020 Nicotiana tabacum HOM05D001108 ORTHO05D005418 8.1e-88 327.8 214 76.2
VMungo1127G1775 Vigna mungo HOM05D001108 ORTHO05D005418 1.4e-87 327.0 276 64.5
CAN.G248.33 Capsicum annuum HOM05D001108 ORTHO05D005418 3.1e-87 325.9 284 63.7
Cc05_g07130 Coffea canephora HOM05D001108 ORTHO05D005418 6.9e-87 324.7 200 80.0
DCAR_013007 Daucus carota HOM05D001108 ORTHO05D005418 9.0e-87 324.3 201 80.6
Lsat_1_v5_gn_4_70021 Lactuca sativa HOM05D001108 ORTHO05D005418 9.0e-87 324.3 251 67.3
RcHm_v2.0_Chr7g0232111 Rosa chinensis HOM05D001108 ORTHO05D005418 1.5e-86 323.6 281 63.3
EL10Ac4g08320 Beta vulgaris HOM05D001108 ORTHO05D005418 4.5e-86 322.0 253 64.0
CAN.G248.11 Capsicum annuum HOM05D001108 ORTHO05D005418 4.5e-86 322.0 208 76.4
FAN04G2154 Fragaria x ananassa HOM05D001108 ORTHO05D005418 9.9e-86 320.9 286 62.9
Potri.013G131800 Populus trichocarpa HOM05D001108 ORTHO05D005418 1.7e-85 320.1 276 67.8
Glyma.12G112900 Glycine max HOM05D001108 ORTHO05D005418 2.2e-85 319.7 229 71.2
CsaV3_6G013000 Cucumis sativus L. HOM05D001108 ORTHO05D005418 1.1e-84 317.4 274 61.3
Haze_13157 Corylus avellana HOM05D001108 ORTHO05D005418 1.4e-84 317.0 200 79.5
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 1.9e-84 316.6 265 64.2
unitig_60.g25406 Utricularia gibba HOM05D001108 ORTHO05D005418 2.5e-84 316.2 211 74.4
FvH4_5g33380 Fragaria vesca HOM05D001108 ORTHO05D005418 3.2e-84 315.8 285 61.8
FAN18G0425 Fragaria x ananassa HOM05D001108 ORTHO05D005418 3.2e-84 315.8 285 61.8
ECA246G0340 Erigeron canadensis HOM05D001108 ORTHO05D005418 5.5e-84 315.1 201 77.6
Eucgr.K01017 Eucalyptus grandis HOM05D001108 ORTHO05D005418 5.5e-84 315.1 278 62.9
ClCG02G017630 Citrullus lanatus HOM05D001108 ORTHO05D005418 1.2e-83 313.9 261 63.2
CARHR111330 Cardamine hirsuta HOM05D001108 ORTHO05D005418 1.6e-83 313.5 239 69.0
Cfa017142 Carpinus fangiana HOM05D001108 ORTHO05D005418 1.6e-83 313.5 200 78.0
Lj3g0011439 Lotus japonicus HOM05D001108 ORTHO05D005418 2.1e-83 313.2 261 63.6
Ca_20056_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 3.5e-83 312.4 279 61.3
Phvul.011G114100 Phaseolus vulgaris HOM05D001108 ORTHO05D005418 3.5e-83 312.4 276 62.3
CsaV3_6G012940 Cucumis sativus L. HOM05D001108 ORTHO05D005418 4.6e-83 312.0 266 62.0
Sed0006413 Sechium edule HOM05D001108 ORTHO05D005418 1.0e-82 310.8 246 65.4
PGSC0003DMG400018350 Solanum tuberosum HOM05D001108 ORTHO05D005418 1.3e-82 310.5 200 78.0
HPP92_003131 Vanilla planifolia HOM05D001108 ORTHO05D005418 1.8e-82 310.1 270 61.1
Cpa.g.sc34.159 Carica papaya HOM05D001108 ORTHO05D005418 2.3e-82 309.7 277 59.9
Sabra13G0111300 Salix brachista HOM05D001108 ORTHO05D005418 2.3e-82 309.7 269 67.3
PGR142G4253 Punica granatum HOM05D001108 ORTHO05D005418 3.9e-82 308.9 284 61.6
AUR62002952 Chenopodium quinoa HOM05D001108 ORTHO05D005418 5.1e-82 308.5 232 68.5
Nn1g06569 Nelumbo nucifera HOM05D001108 ORTHO05D005418 5.1e-82 308.5 195 77.4
AL3G53780 Arabidopsis lyrata HOM05D001108 ORTHO05D005418 2.5e-81 306.2 236 67.8
AT2G20690 Arabidopsis thaliana HOM05D001108 ORTHO05D005418 2.5e-81 306.2 239 66.9
Aqoxy1G02436 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 3.3e-81 305.8 182 84.1
Lj1P722T15 Lonicera japonica HOM05D001108 ORTHO05D005418 4.3e-81 305.4 181 85.6
THA.LOC104824701 Tarenaya hassleriana HOM05D001108 ORTHO05D005418 5.6e-81 305.1 204 76.5
Dinv23643 Davidia involucrata HOM05D001108 ORTHO05D005418 7.4e-81 304.7 177 84.7
SGA_v2.0_scaffold92G28314 Striga asiatica HOM05D001108 ORTHO05D005418 1.3e-80 303.9 282 60.3
Dinv26419 Davidia involucrata HOM05D001108 ORTHO05D005418 1.6e-80 303.5 177 83.1
Medtr0004s0220 Medicago truncatula HOM05D001108 ORTHO05D005418 2.1e-80 303.1 245 63.3
Thhalv10002078m.g Eutrema salsugineum HOM05D001108 ORTHO05D005418 1.4e-79 300.4 250 64.8
arahy.Tifrunner.gnm1.ann1.SGC5R3 Arachis hypogaea HOM05D001108 ORTHO05D005418 2.4e-79 299.7 249 66.7
C07p00210 Brassica napus HOM05D001108 ORTHO05D005418 3.1e-79 299.3 204 74.5
CDE02G0464 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 3.1e-79 299.3 197 74.6
Medtr1g066930 Medicago truncatula HOM05D001108 ORTHO05D005418 6.9e-79 298.1 235 64.3
Carub.0003s3520 Capsella rubella HOM05D001108 ORTHO05D005418 9.0e-79 297.7 269 61.0
BcaC06g36761 Brassica carinata HOM05D001108 ORTHO05D005418 1.5e-78 297.0 242 65.7
BolC7t40471H Brassica oleracea HOM05D001108 ORTHO05D005418 1.5e-78 297.0 242 65.7
BcaB03g16863 Brassica carinata HOM05D001108 ORTHO05D005418 2.0e-78 296.6 239 65.7
A07p00070 Brassica napus HOM05D001108 ORTHO05D005418 2.6e-78 296.2 246 64.6
SEGI_26411 Sequoiadendron giganteum HOM05D001108 ORTHO05D005418 4.5e-78 295.4 202 73.8
arahy.Tifrunner.gnm1.ann1.85LIYI Arachis hypogaea HOM05D001108 ORTHO05D005418 7.6e-78 294.7 249 65.9
Aqoxy1G02437 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 1.0e-77 294.3 278 59.0
arahy.Tifrunner.gnm1.ann1.PPEG78 Arachis hypogaea HOM05D001108 ORTHO05D005418 1.7e-77 293.5 281 60.9
BraA07t27798Z Brassica rapa HOM05D001108 ORTHO05D005418 1.7e-77 293.5 246 64.2
AUR62007757 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.7e-77 293.5 224 67.4
arahy.Tifrunner.gnm1.ann1.S0UG05 Arachis hypogaea HOM05D001108 ORTHO05D005418 2.1e-75 286.6 281 60.1
Sp3g33940 Schrenkiella parvula HOM05D001108 ORTHO05D005418 1.3e-74 283.9 193 74.1
MELO3C000760.2 Cucumis melo HOM05D001108 ORTHO05D005418 3.0e-74 282.7 232 62.1
Actinidia11036 Actinidia chinensis HOM05D001108 ORTHO05D005418 6.7e-74 281.6 184 79.3
SMO137G0361 Selaginella moellendorffii HOM05D001108 ORTHO05D005418 5.7e-73 278.5 209 68.4
Pp3c2_19260 Physcomitrium patens HOM05D001108 ORTHO05D005418 6.3e-72 275.0 200 70.0
AagrBONN_evm.TU.Sc2ySwM_228.5414 Anthoceros agrestis HOM05D001108 ORTHO05D005418 8.2e-72 274.6 199 69.8
CBR_g36747 Chara braunii HOM05D001108 ORTHO05D005418 2.4e-71 273.1 213 65.7
Duzib128G0360 Durio zibethinus HOM05D001108 ORTHO05D005418 5.3e-71 271.9 244 61.5
Mapoly0026s0114 Marchantia polymorpha HOM05D001108 ORTHO05D005418 5.3e-71 271.9 202 66.8
CDE09G0563 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 5.9e-70 268.5 179 73.7
Ah.04g164360 Amaranthus hybridus HOM05D001108 ORTHO05D005418 1.0e-69 267.7 256 59.0
ATR1096G056 Amborella trichopoda HOM05D001108 ORTHO05D005418 1.1e-68 264.2 218 61.9
Sabra19G0110900 Salix brachista HOM05D001108 ORTHO05D005418 1.2e-62 244.2 253 57.3
Zm00001eb410410 Zea mays HOM05D001108 ORTHO05D005418 4.5e-62 242.3 218 59.2
Zm00001eb410210 Zea mays HOM05D001108 ORTHO05D005418 2.2e-61 240.0 249 54.6
HanXRQChr06g0169711 Helianthus annuus HOM05D001108 ORTHO05D005418 5.0e-61 238.8 282 53.9
CAN.G248.16 Capsicum annuum HOM05D001108 ORTHO05D005418 1.9e-60 236.9 165 70.9
CAN.G851.1 Capsicum annuum HOM05D001108 ORTHO05D005418 1.9e-60 236.9 165 70.9
Os12g0541000 Oryza sativa ssp. japonica HOM05D001108 ORTHO05D005418 5.5e-60 235.3 246 53.3
BcaC04g22783 Brassica carinata HOM05D001108 ORTHO05D005418 5.1e-58 228.8 171 70.8
MD09G1265300 Malus domestica HOM05D001108 ORTHO05D005418 1.1e-55 221.1 184 63.6
Psat4g001880 Pisum sativum HOM05D001108 ORTHO05D005418 1.1e-52 211.1 276 48.2
CANSAT80G2295 Cannabis sativa HOM05D001108 ORTHO05D005418 3.0e-50 203.0 131 73.3
C09p15330 Brassica napus HOM05D001108 ORTHO05D005418 2.8e-48 196.4 192 57.3
unitig_88.g27586 Utricularia gibba HOM05D001108 ORTHO05D005418 3.2e-44 183.0 111 80.2
Lsat_1_v5_gn_4_42240 Lactuca sativa HOM05D001108 ORTHO05D005418 1.2e-43 181.0 113 78.8
Cfa026241 Carpinus fangiana HOM05D001108 ORTHO05D005418 4.7e-43 179.1 232 43.5
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 8.8e-42 174.9 206 45.1
HanXRQChr06g0169731 Helianthus annuus HOM05D001108 ORTHO05D005418 1.4e-39 167.5 94 86.2
CAN.G362.18 Capsicum annuum HOM05D001108 ORTHO05D005418 7.2e-36 155.2 222 45.0
FAN08G2132 Fragaria x ananassa HOM05D001108 ORTHO05D005418 2.8e-32 143.3 88 77.3
Cfa014613 Carpinus fangiana HOM05D001108 ORTHO05D005418 1.8e-31 140.6 207 44.4
PRCOL_00001102 Prasinoderma coloniale HOM05D001108 ORTHO05D005418 4.0e-26 122.9 199 37.2
MCO11G757 Micromonas commoda HOM05D001108 ORTHO05D005418 5.7e-25 119.0 192 41.1
Ca_28725_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 4.9e-24 115.9 218 35.3
Psat5g098840 Pisum sativum HOM05D001108 ORTHO05D005418 6.3e-24 115.5 144 47.2
unitig_88.g27587 Utricularia gibba HOM05D001108 ORTHO05D005418 8.3e-24 115.2 80 68.8
Cre06.g296600 Chlamydomonas reinhardtii HOM05D001108 ORTHO05D005418 5.4e-23 112.5 210 33.3
CAN.G248.14 Capsicum annuum HOM05D001108 ORTHO05D005418 3.5e-22 109.8 70 75.7
Psat5g097760 Pisum sativum HOM05D002292 ORTHO05D005418 2.9e-16 90.1 181 35.4
AagrBONN_evm.TU.Sc2ySwM_228.459 Anthoceros agrestis HOM05D001108 ORTHO05D005418 1.4e-15 87.8 201 31.8
Medtr4g063470 Medicago truncatula HOM05D001108 ORTHO05D005418 3.0e-13 80.1 66 54.5
Lsat_1_v5_gn_8_150060 Lactuca sativa HOM05D001108 ORTHO05D005418 4.3e-12 76.3 65 58.5
RcHm_v2.0_Chr2g0153941 Rosa chinensis HOM05D001108 ORTHO05D005418 3.6e-11 73.2 113 42.5
BolC9t54441H Brassica oleracea HOM05D001108 ORTHO05D005418 3.7e-08 63.2 38 78.9
MBI06_g06479_MAGBIO Magnolia biondii HOM05D001108 ORTHO05D005418 6.4e-08 62.4 67 56.7
Psat0s773g0040 Pisum sativum HOM05D001108 ORTHO05D005418 9.2e-07 58.5 40 70.0


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