Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 6.3e-75 283.9 129 100.0
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 3.6e-38 161.8 129 64.3
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 2.0e-36 156.0 128 59.4
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 2.6e-36 155.6 86 80.2
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 3.4e-36 155.2 84 84.5
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 9.8e-36 153.7 134 56.7
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 9.8e-36 153.7 121 58.7
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 1.3e-35 153.3 85 78.8
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 2.2e-35 152.5 86 79.1
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 2.8e-35 152.1 80 85.0
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 6.3e-35 151.0 78 85.9
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 6.3e-35 151.0 129 58.9
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 1.4e-34 149.8 85 77.6
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 1.2e-33 146.7 131 56.5
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 1.2e-33 146.7 118 61.0
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 1.6e-33 146.4 118 59.3
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 2.0e-33 146.0 85 80.0
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 2.7e-33 145.6 90 71.1
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 3.5e-33 145.2 85 78.8
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 3.5e-33 145.2 78 80.8
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 4.5e-33 144.8 97 68.0
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 7.7e-33 144.1 85 78.8
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 7.7e-33 144.1 85 78.8
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 1.0e-32 143.7 81 80.2
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 1.7e-32 142.9 88 73.9
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 1.7e-32 142.9 83 77.1
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 1.7e-32 142.9 77 81.8
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 2.3e-32 142.5 77 80.5
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 2.9e-32 142.1 129 55.0
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 2.9e-32 142.1 80 81.2
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 8.6e-32 140.6 77 79.2
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 1.1e-31 140.2 78 76.9
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 1.5e-31 139.8 77 79.2
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 3.2e-31 138.7 93 72.0
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 9.5e-31 137.1 77 76.6
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 9.5e-31 137.1 77 77.9
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 1.2e-30 136.7 77 76.6
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 1.2e-30 136.7 123 55.3
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 1.6e-30 136.3 77 76.6
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 1.6e-30 136.3 75 76.0
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 3.6e-30 135.2 77 75.3
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 3.6e-30 135.2 97 67.0
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 8.0e-30 134.0 104 57.7
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.4e-29 133.3 74 75.7
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 1.8e-29 132.9 86 75.6
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 6.8e-29 131.0 96 64.6
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 8.8e-29 130.6 91 69.2
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 7.5e-28 127.5 83 69.9
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 7.5e-28 127.5 83 69.9
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 3.7e-27 125.2 83 69.9
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 1.4e-26 123.2 65 76.9
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 5.4e-26 121.3 81 72.8
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 1.2e-25 120.2 130 53.8
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 1.6e-25 119.8 129 48.8
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 2.0e-25 119.4 129 48.8
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 2.0e-25 119.4 123 49.6
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 2.7e-25 119.0 65 75.4
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 8.6e-24 114.0 78 64.1
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 1.9e-23 112.8 81 61.7
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 1.9e-23 112.8 81 66.7
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 2.3e-21 105.9 78 64.1
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 8.9e-21 104.0 87 59.8
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 8.9e-21 104.0 78 66.7
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 2.6e-20 102.4 53 83.0
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 5.7e-20 101.3 55 78.2
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 5.7e-20 101.3 46 91.3
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 9.8e-20 100.5 96 57.3
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 1.4e-18 96.7 82 59.8
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 9.2e-18 94.0 113 45.1
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 9.2e-18 94.0 46 89.1
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.6e-17 93.2 88 53.4
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.0e-17 92.8 88 52.3
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 2.0e-17 92.8 62 66.1
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 7.8e-17 90.9 131 41.2
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 2.3e-16 89.4 139 39.6
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 6.6e-16 87.8 87 51.7
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 1.5e-15 86.7 81 56.8
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 1.2e-14 83.6 81 55.6
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 4.7e-14 81.6 67 58.2
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 2.3e-13 79.3 49 71.4
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 4.0e-13 78.6 64 57.8
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 1.2e-06 57.0 31 80.6


User provided reference genes

Program Settings