Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0114500 Rhododendron simsii HOM05D007628 ORTHO05D007342 6.1e-38 160.2 76 100.0
Rhsim06G0114400 Rhododendron simsii HOM05D007628 ORTHO05D007342 2.5e-31 138.3 76 85.5
CSS0048807 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 3.6e-22 107.8 77 64.9
CSS0040221 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 8.1e-22 106.7 77 64.9
CSS0007364 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 3.1e-21 104.8 77 64.9
Actinidia25283 Actinidia chinensis HOM05D007628 ORTHO05D007342 3.1e-13 78.2 80 57.5
CSS0008166 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 3.4e-12 74.7 77 48.1
Lj4g0016425 Lotus japonicus HOM05D007628 ORTHO05D007342 4.4e-12 74.3 77 45.5
Cc10_g10240 Coffea canephora HOM05D007628 ORTHO05D007342 1.4e-10 69.3 72 50.0
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 7.1e-10 67.0 73 49.3
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 1.2e-09 66.2 73 47.9
QL02p025976 Quercus lobata HOM05D007628 ORTHO05D007342 1.2e-09 66.2 78 44.9
QL93p0163_0044 Quercus lobata HOM05D007628 ORTHO05D007342 1.2e-09 66.2 78 44.9
Cc10_g10200 Coffea canephora HOM05D007628 ORTHO05D007342 2.7e-09 65.1 78 41.0
Haze_21294 Corylus avellana HOM05D007628 ORTHO05D007342 1.3e-08 62.8 79 39.2
arahy.Tifrunner.gnm1.ann1.UI0JR9 Arachis hypogaea HOM05D007628 ORTHO05D007342 8.7e-08 60.1 75 42.7
arahy.Tifrunner.gnm1.ann1.L82REB Arachis hypogaea HOM05D007628 ORTHO05D007342 1.5e-07 59.3 81 42.0
arahy.Tifrunner.gnm1.ann1.GT4ITC Arachis hypogaea HOM05D007628 ORTHO05D007342 3.3e-07 58.2 81 40.7
arahy.Tifrunner.gnm1.ann1.I9AMSX Arachis hypogaea HOM05D007628 ORTHO05D007342 5.6e-07 57.4 75 41.3
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 5.6e-07 57.4 71 40.8
Prupe.1G552700 Prunus persica HOM05D007628 ORTHO05D007342 7.3e-07 57.0 74 45.9
CSS0046525 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 9.6e-07 56.6 53 43.4
TPR.G34119 Trifolium pratense HOM05D007628 ORTHO05D007342 9.6e-07 56.6 71 40.8
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 1.2e-06 56.2 74 47.3
Lj4g0001077 Lotus japonicus HOM05D007628 ORTHO05D007342 1.6e-06 55.8 68 42.6
Psat7g225960 Pisum sativum HOM05D007628 ORTHO05D007342 1.6e-06 55.8 77 40.3
Cc08_g07970 Coffea canephora HOM05D013878 ORTHO05D007342 2.1e-06 55.5 79 36.7
Lalb_Chr20g0108111 Lupinus albus HOM05D007628 ORTHO05D007342 2.8e-06 55.1 73 39.7
Psat7g226000 Pisum sativum HOM05D007628 ORTHO05D007342 2.8e-06 55.1 71 46.5
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 2.8e-06 55.1 74 43.2
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 3.6e-06 54.7 75 45.3
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 6.2e-06 53.9 74 40.5
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 8.1e-06 53.5 63 44.4
TPR.G34100 Trifolium pratense HOM05D007628 ORTHO05D007342 8.1e-06 53.5 72 41.7


User provided reference genes

Program Settings