Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0092700 Rhododendron simsii HOM05D009692 ORTHO05D011920 9.8e-116 420.2 227 100.0
Rhsim02G0184400 Rhododendron simsii HOM05D009692 ORTHO05D011920 5.8e-100 367.9 216 93.1
Rhsim13G0189100 Rhododendron simsii HOM05D009692 ORTHO05D011920 6.4e-83 311.2 194 90.2
Rhsim04G0109100 Rhododendron simsii HOM05D009692 ORTHO05D011920 1.0e-56 224.2 174 81.0
RhsimUnG0049100 Rhododendron simsii HOM05D009692 ORTHO05D011920 3.9e-56 222.2 158 75.3
Rhsim02G0246800 Rhododendron simsii HOM05D009692 ORTHO05D011920 1.4e-48 197.2 190 58.4
Rhsim08G0085700 Rhododendron simsii HOM05D009692 ORTHO05D011920 7.4e-47 191.4 170 62.9
Rhsim09G0105200 Rhododendron simsii HOM05D009692 ORTHO05D011920 2.4e-45 186.4 181 56.9
Rhsim03G0132400 Rhododendron simsii HOM05D009692 ORTHO05D339955 6.3e-38 161.8 158 65.8
Actinidia06423 Actinidia chinensis HOM05D000034 ORTHO05D000277 4.8e-30 135.6 184 50.5
Actinidia06807 Actinidia chinensis HOM05D009692 ORTHO05D011920 4.1e-29 132.5 179 50.3
Rhsim09G0193500 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.9e-26 123.6 242 40.9
Actinidia00035 Actinidia chinensis HOM05D000034 ORTHO05D000037 2.7e-25 119.8 202 43.1
Actinidia09887 Actinidia chinensis HOM05D000034 ORTHO05D000037 3.7e-22 109.4 194 42.8
Actinidia07330 Actinidia chinensis HOM05D009692 ORTHO05D011920 1.8e-21 107.1 212 40.6
Rhsim01G0203500 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.2e-20 104.4 219 37.9
vmacro14063 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 1.7e-19 100.5 202 36.1
vmacro04835 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 5.0e-19 99.0 199 31.7
vmacro14529 Vaccinium macrocarpon HOM05D009692 ORTHO05D011920 5.0e-19 99.0 194 32.0
vmacro19656 Vaccinium macrocarpon HOM05D009692 ORTHO05D011920 5.0e-19 99.0 194 31.4
Actinidia29301 Actinidia chinensis HOM05D009692 ORTHO05D011920 1.1e-18 97.8 100 48.0
vmacro09957 Vaccinium macrocarpon HOM05D003400 ORTHO05D003687 1.2e-17 94.4 182 41.2
Actinidia16895 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.6e-17 94.0 193 36.8
Rhsim04G0142600 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.6e-17 92.8 175 34.3
Actinidia04330 Actinidia chinensis HOM05D009692 ORTHO05D011920 1.4e-16 90.9 193 36.3
vmacro11711 Vaccinium macrocarpon HOM05D009692 ORTHO05D011920 9.8e-15 84.7 100 46.0
vmacro22639 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 1.7e-14 84.0 153 36.6
Actinidia02601 Actinidia chinensis HOM05D009692 ORTHO05D011920 8.3e-14 81.6 108 38.9
vmacro16065 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 1.1e-13 81.3 106 40.6
vmacro11101 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.4e-13 80.1 179 31.3
vmacro17546 Vaccinium macrocarpon HOM05D009692 ORTHO05D011920 3.2e-13 79.7 186 35.5
vmacro05435 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 9.2e-13 78.2 193 29.5
Actinidia01574 Actinidia chinensis HOM05D009692 ORTHO05D011920 1.6e-12 77.4 95 38.9
Actinidia31879 Actinidia chinensis HOM05D009692 ORTHO05D011920 4.6e-12 75.9 187 31.0
vmacro22835 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.3e-11 73.6 111 34.2
vmacro03716 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 9.5e-10 68.2 106 34.9
vmacro05125 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.1e-09 67.0 106 34.0
vmacro07016 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.1e-09 67.0 106 34.0
vmacro10340 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.1e-09 67.0 106 34.0
vmacro05218 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.8e-09 66.6 108 33.3
vmacro10760 Vaccinium macrocarpon HOM05D009692 ORTHO05D011920 4.7e-09 65.9 191 24.6
vmacro00234 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 6.2e-09 65.5 106 34.9
Actinidia37758 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.0e-08 64.7 70 47.1
Actinidia38160 Actinidia chinensis HOM05D000034 ORTHO05D000277 3.1e-08 63.2 99 35.4
vmacro08876 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 4.0e-08 62.8 61 47.5
vmacro15511 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 4.0e-08 62.8 108 33.3
vmacro02413 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 5.2e-08 62.4 207 27.1
vmacro21923 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 5.2e-08 62.4 106 32.1
Actinidia05861 Actinidia chinensis HOM05D009692 ORTHO05D011920 6.8e-08 62.0 173 38.2
Actinidia18641 Actinidia chinensis HOM05D009692 ORTHO05D011920 8.9e-08 61.6 123 33.3
Hma1.2p1_1408F.1_g281560 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-07 60.5 228 25.0
vmacro07179 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.0e-07 60.5 97 37.1
Actinidia18644 Actinidia chinensis HOM05D009692 ORTHO05D011920 3.4e-07 59.7 123 32.5
vmacro22899 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 4.4e-07 59.3 102 35.3
vmacro22551 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 5.8e-07 58.9 102 35.3
Dinv14448 Davidia involucrata HOM05D000780 ORTHO05D000277 9.8e-07 58.2 107 31.8
vmacro09023 Vaccinium macrocarpon HOM05D038422 ORTHO05D000277 9.8e-07 58.2 77 39.0
Actinidia26110 Actinidia chinensis HOM05D000034 ORTHO05D000277 1.3e-06 57.8 97 33.0
CSS0011764 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 2.2e-06 57.0 81 37.0
vmacro00828 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 2.2e-06 57.0 205 24.9
CSS0046359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 4.9e-06 55.8 97 33.0
Dinv12704 Davidia involucrata HOM05D000034 ORTHO05D000277 6.4e-06 55.5 103 34.0
Actinidia40453 Actinidia chinensis HOM05D000034 ORTHO05D000277 8.3e-06 55.1 106 31.1
vmacro04370 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 8.3e-06 55.1 103 33.0


User provided reference genes

Program Settings