Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 3.2e-84 315.1 165 100.0
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 4.4e-49 198.4 172 70.9
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.9e-45 185.3 172 67.4
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.9e-45 185.3 172 67.4
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 6.8e-42 174.5 173 63.6
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 9.9e-41 170.6 165 61.2
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 1.3e-40 170.2 165 61.2
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 1.3e-40 170.2 165 63.6
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.2e-40 169.5 152 70.4
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 8.4e-40 167.5 170 60.0
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.1e-39 167.2 160 63.8
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.9e-39 166.4 169 61.5
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 4.6e-38 161.8 165 61.2
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 7.8e-38 161.0 173 60.1
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 3.6e-35 152.1 165 59.4
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 6.2e-35 151.4 161 57.1
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 1.8e-34 149.8 171 56.1
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 2.4e-34 149.4 178 56.2
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 3.1e-34 149.1 179 57.0
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 5.2e-34 148.3 172 55.2
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 6.9e-34 147.9 175 53.1
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 8.9e-34 147.5 178 54.5
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 8.9e-34 147.5 178 54.5
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 8.9e-34 147.5 183 54.1
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.2e-33 147.1 179 55.3
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 1.2e-33 147.1 156 60.3
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 1.2e-33 147.1 154 61.0
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-33 146.7 165 53.9
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 2.0e-33 146.4 162 56.2
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.0e-33 146.4 166 56.6
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 4.4e-33 145.2 169 55.6
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 4.4e-33 145.2 175 54.9
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 5.8e-33 144.8 168 53.6
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 5.8e-33 144.8 180 53.3
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 1.7e-32 143.3 182 53.8
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 3.8e-32 142.1 183 52.5
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 3.8e-32 142.1 176 52.8
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 8.4e-32 141.0 162 54.9
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 8.4e-32 141.0 182 53.3
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.4e-31 140.2 168 54.8
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 2.4e-31 139.4 170 56.5
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 4.2e-31 138.7 88 81.8
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 4.2e-31 138.7 168 54.2
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 7.1e-31 137.9 173 52.6
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 1.2e-30 137.1 124 63.7
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 1.2e-30 137.1 169 53.8
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.6e-30 136.7 162 54.9
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 2.1e-30 136.3 169 53.3
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 2.7e-30 136.0 185 49.7
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 3.5e-30 135.6 169 52.7
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 6.0e-30 134.8 180 52.8
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 6.0e-30 134.8 125 61.6
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 7.8e-30 134.4 165 53.3
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 1.0e-29 134.0 177 52.0
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.0e-29 134.0 182 48.4
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 1.3e-29 133.7 134 61.2
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 1.3e-29 133.7 167 53.9
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 1.7e-29 133.3 93 79.6
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 1.7e-29 133.3 179 48.0
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 3.0e-29 132.5 183 48.1
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 3.9e-29 132.1 164 54.9
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 3.9e-29 132.1 90 80.0
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 3.9e-29 132.1 98 72.4
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 6.6e-29 131.3 96 71.9
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 6.6e-29 131.3 113 67.3
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 6.6e-29 131.3 107 72.0
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 1.1e-28 130.6 149 54.4
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 1.1e-28 130.6 125 61.6
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 1.5e-28 130.2 88 75.0
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.5e-28 130.2 162 53.1
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 1.9e-28 129.8 155 53.5
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 1.9e-28 129.8 180 48.3
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 1.9e-28 129.8 168 51.8
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 2.5e-28 129.4 176 51.1
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 3.3e-28 129.0 168 51.8
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 3.3e-28 129.0 168 51.8
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 4.3e-28 128.6 118 62.7
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 4.3e-28 128.6 118 62.7
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 5.6e-28 128.3 176 51.1
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 5.6e-28 128.3 167 52.1
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 7.3e-28 127.9 140 55.0
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 7.3e-28 127.9 140 55.0
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 9.6e-28 127.5 168 51.2
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 9.6e-28 127.5 179 50.3
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 9.6e-28 127.5 176 47.7
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.6e-27 126.7 109 67.9
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 1.6e-27 126.7 140 55.0
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.6e-27 126.7 140 55.0
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.1e-27 126.3 113 61.9
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 2.8e-27 125.9 187 47.1
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 3.6e-27 125.6 112 65.2
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 8.1e-27 124.4 185 50.3
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 8.1e-27 124.4 92 70.7
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 8.1e-27 124.4 97 72.2
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.4e-26 122.9 105 66.7
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 2.4e-26 122.9 86 74.4
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 2.4e-26 122.9 90 73.3
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 6.9e-26 121.3 123 56.9
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 9.0e-26 120.9 84 75.0
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 2.0e-25 119.8 87 72.4
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 2.0e-25 119.8 87 72.4
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 2.6e-25 119.4 166 50.0
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 3.4e-25 119.0 98 68.4
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 3.8e-24 115.5 94 66.0
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 1.1e-23 114.0 95 68.4
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 7.9e-22 107.8 85 64.7
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 1.0e-21 107.5 83 69.9
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 8.7e-21 104.4 64 85.9
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 1.1e-20 104.0 112 58.9
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 5.6e-20 101.7 90 61.1
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 7.4e-20 101.3 93 60.2
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 6.9e-18 94.7 115 54.8
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 6.9e-18 94.7 93 61.3
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 1.3e-16 90.5 80 58.8
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 1.9e-15 86.7 87 52.9
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 6.7e-13 78.2 87 54.0
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 6.9e-10 68.2 49 71.4


User provided reference genes

Program Settings